Hirundo rustica (Barn swallow): 120761321
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Entry
120761321 CDS
T09369
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120761321 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrt04121
]
120761321 (RNF43)
Enzymes [BR:
hrt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120761321 (RNF43)
Ubiquitin system [BR:
hrt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120761321 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
KIAA1549
zf-C3HC4_3
DUF2254
Motif
Other DBs
NCBI-GeneID:
120761321
NCBI-ProteinID:
XP_039938393
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All DBs
Position
19:10641522..10698778
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AA seq
831 aa
AA seq
DB search
MSAGPQVQLAVLWPWLLMATLQAGLGHTGLALAAAVESERAAAQKAIIRVIPLKVEPIIL
EGEFANVAEVTPAEGKLLQSHPLSLCNTSEDEHTESGFITIVKLEQPDRDPNPCLSLANK
AKLAGERGARAILFDITDDESAADQLRKPRGLSQPVVLIRGHDAELLMGVVNKNREAHVK
IEVKEPPAWPDYDVWILLTVVSTVVVIILIFVVRTKCQLNRTQDSVQQQTLQAIGQLATR
RYQPRARPAPRWDSASSCSSAPVCAICLEEFSEGQELRIISCSHEFHRECVDPWLQQHHT
CPLCMFNILARDSGDQAMATSSRLVPQDMEPGRRLHLFRQHPGHALYHLPHAYPQRTLRS
FPPEPAHGSPFFHSPELSQLDFGTIHYMPYRPTTSLLACGHAAPLAPGLLGQQHPTPSAC
GQALAPHRTCPLQLQPPCLTPKAALAQKQHRAPTLRRGLGHGHQHNSSGSGESYLTEHSG
YLADGPGSDSSSGPCHGSSSDSMLNCTDVSLQGIHGSCSTFRSSLSSDYDPFVYCSSEGP
AAEHGQEQLRPPRDRRPRSLDLMVPRGAAPAKPQVLSHVHYHHHQHHHYRRDTECPPGRA
GQGPGPRKSRSSGAKVAFHSARTQKRTEKSHHSEQPLESSAVLQEAAPAGQPACPQEGWE
PHQAPSTSPNRLDFSVDANRQLGAAGTPPVPLSPRHSLQSRHHRRKRKCPLEPDPTLLPK
DSAEPGACDPHLTPGHPTGYRCSPEAQPLISSAPLPSGSQPLWKCLVPQSSSELRKQEER
LSGRKRNCSVPADFSGTGTPRHSLSVLLHCPSQEGDQGSEEEVQDVHEHSV
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctggcccccaggtgcagctggctgtcctctggccttggctgctcatggcgacc
ctgcaggcaggactgggccacaccgggctggcgctggcggcggccgtggagtcggagcgg
gcggcggcgcagaaagccatcatcagggtcatcccgctcaaagtggagcccatcatcctg
gaaggggagttcgccaacgtcgccgaggtgactccggccgaagggaagctactccagtcc
cacccactatccctgtgcaacaccagtgaggatgaacacacagaatcggggttcatcacc
atcgtcaagctggaacagccggatcgggatcccaacccctgcctgtccctggccaacaag
gcaaagctggcaggggagcgtggagcccgtgcgatccttttcgacatcacagatgatgaa
agtgctgctgatcagctgaggaagcccagaggcctgagccagcctgtggtcctgatcagg
ggtcacgatgctgagctcctcatgggcgttgtgaacaagaacagagaggcccatgtgaag
atagaggtcaaggagccaccagcttggccagactacgacgtgtggattcttctcacagtg
gtcagcactgtggtcgtcatcattttgatttttgttgtccgcacaaaatgccagctgaac
aggactcaggactcggtgcagcagcagaccctgcaggccatcgggcaactggccacgcgc
cgctaccagccccgggcacggccggccccacgctgggactcggccagcagctgcagctct
gccccggtctgcgccatctgcctcgaggagttcagcgaggggcaggaactgcggatcatc
tcatgctcccacgagttccatcgggagtgtgttgacccttggctgcagcaacaccacacg
tgtccgctttgcatgttcaatattcttgccagagactcgggggaccaggccatggctacc
agctccaggctggttcctcaggacatggagcctgggcggcgactccaccttttccgccag
catccaggacatgccctttaccacctcccacacgcgtatcctcagaggaccctcaggagc
tttcccccagagccagcccatggcagccccttcttccactctccagagctctcccagctg
gattttggcaccatccactacatgccctacagaccaaccacctccctgctggcctgcggc
cacgcggccccgctggccccgggcttgctcgggcagcagcaccccaccccctctgcatgt
gggcaggcgctggcaccccacaggacatgtccccttcagcttcagcccccctgtctgaca
cccaaggcagccctggcacagaagcagcaccgtgcacccaccctgcgccgggggcttggc
cacgggcaccagcacaacagcagtggctctggggagagctatctcacggagcacagcggg
tacctggccgacgggccgggcagcgactccagctcggggccctgccacggctcctccagt
gactccatgttgaactgcacggatgtcagcctgcagggcatacacggcagctgctccacc
ttccgcagctccctcagcagcgactacgatcccttcgtgtactgcagctccgagggcccc
gccgcggagcacggccaggagcagctgcgaccgcccagggacaggcggccccggtccttg
gacctgatggtgcccaggggcgctgctccggccaagccccaggtgctcagccacgtccac
taccaccaccaccagcaccaccactaccggcgggacacggagtgcccccctgggcgggcc
gggcaggggccggggccacgcaaatcccggtcctccggggccaaagttgccttccacagt
gctcggacacaaaagaggactgagaaaagccatcactctgagcagcctctggaaagcagt
gctgtgctgcaggaggcagctccggcaggtcagccagcctgtccccaggaaggctgggag
ccccatcaagccccctccacttctccaaacaggttggacttcagtgtagatgccaacaga
caattgggagcagctggcacaccccctgtcccgctgtctcccagacacagcttacagagc
aggcatcaccgaaggaaaagaaagtgtcccctggagcccgaccccactctcctgcccaag
gactcagccgagcccggagcctgtgaccctcaccttactcctggccatcccactggctac
cgctgctctcctgaagcccagcccctgatctcaagtgctccccttcccagcggctcccag
ccactctggaagtgtttagtgccacagtccagctccgagctgaggaagcaggaggagcgg
ttgtcgggacggaagagaaactgttcagttcctgcggatttctcagggacgggcaccccc
agacacagcctgagtgtcctccttcactgcccatctcaggagggggatcagggatctgaa
gaggaggttcaggatgtccatgaacactcagtttaa
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