Hirundo rustica (Barn swallow): 120761327
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Entry
120761327 CDS
T09369
Symbol
CLDN3
Name
(RefSeq) LOW QUALITY PROTEIN: claudin-3
KO
K06087
claudin
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03272
Virion - Hepatitis viruses
hrt04382
Cornified envelope formation
hrt04514
Cell adhesion molecule (CAM) interaction
hrt04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
120761327 (CLDN3)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120761327 (CLDN3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120761327 (CLDN3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120761327 (CLDN3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hrt03037
]
120761327 (CLDN3)
04147 Exosome [BR:
hrt04147
]
120761327 (CLDN3)
Cilium and associated proteins [BR:
hrt03037
]
Other cilia and associated proteins
Stereociliary proteins
120761327 (CLDN3)
Exosome [BR:
hrt04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
120761327 (CLDN3)
Exosomal proteins of colorectal cancer cells
120761327 (CLDN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
CdpA_N
CyanoTRADDas_TM
DUF418
Motif
Other DBs
NCBI-GeneID:
120761327
NCBI-ProteinID:
XP_039938401
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All DBs
Position
19:10549323..10549999
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AA seq
214 aa
AA seq
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MSMGLEIGGVALSVLGWLCSIICCALPMWKVSAFIGNNIVTAQILWEGLWMSCVVQSTGQ
MQCKVYDSMLALPQDLQAARALLVVAIILAVLGLMVAIVGAQCTRCVEDESTKAKITIVS
GVIFLLSAIMTLIPVCWSANTIIRDFYNPLVIEAQKRELGTSLYVGWAASALLLWGGGLL
CCSCPPKDDRYPTGKVAYSAPRSAVTSYDKRNYV
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggggctggagatcggcggtgtggccttgtccgtgctgggttggttgtgcagc
atcatctgctgcgcgttgcccatgtggaaggtgtcggccttcatcggcaacaacatcgtg
acggcccagatcctctgggaaggactgtggatgagctgcgtggtccagagcacggggcag
atgcagtgcaaggtctacgactccatgttggcactgccgcaggacctgcaagccgcccgt
gccctcctggtggtggccatcatcttggccgtcctgggcttaatggtggccatcgtgggc
gcccagtgcacccgctgcgtggaggacgagagcaccaaagccaagatcaccattgtctcc
ggtgtcatcttccttctctctgctatcatgactctcatccctgtctgctggtcagccaac
accatcatccgggatttctacaacccgctggtgatcgaagcgcagaagcgggagctgggc
acttcactctacgtgggctgggcagcctccgcactcctactgtggggggggggcctgctc
tgctgttcctgcccccccaaagatgacaggtaccccacaggcaaggtggcctactctgcc
ccacgctctgccgtcaccagctacgacaagaggaactatgtctga
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