Hirundo rustica (Barn swallow): 120761335
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Entry
120761335 CDS
T09369
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120761335 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120761335 (RABGEF1)
Membrane trafficking [BR:
hrt04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120761335 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
120761335 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
120761335
NCBI-ProteinID:
XP_039938411
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All DBs
Position
19:complement(5147565..5168708)
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AA seq
538 aa
AA seq
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MNLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAER
LQREEEEAYASSQSTQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFTASSRAGAKKAAQEK
TPKQGQPGRERNADNILRDLKEIFTPSWELASPSEALAGKLKEIQEAKAPSPSIHRQASI
ETDRVSKEFIEFIRTYQKPGQDIYKQCKLFLDTMSHKRELSIEEQSECAQDFYQNVADRL
QTRWKVPPEKVEKAMDEVEKYIMTRQYKYVFCPETTDDEKKDLAVQKRIRALHWVTPQML
CVPVSEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAIKITKNEPASAD
DFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQS
LNLSQEDFDRFMTGQTSPKKQESDSFSPDVCLGVKQMCKSLDLLSQLNERQERIVSEAKK
LEKDLIDWTDGIAKEVEDIVEKYPLEIKPKSQALAAIDSENVENDKLPPPLQPQVYAG
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgaagtcggagcgcagggggatccacgtggatcagtcggagctgctgtgcaag
aagggctgtggttactatggcaatcctgcctggcagggattttgctccaagtgctggagg
gaggaataccacaaggccaggcagaagcagattcaagaggattgggagctggcagagcgg
ctccagcgtgaggaggaagaagcctatgccagcagccagagcacccaaggggctcagtcc
ctgaccttttccaagtttgaggagaagaaaaccaatgagaagacaaggaaggtcactact
gtgaagaagttcttcactgcttcctccagagcaggagctaagaaggcagctcaagagaaa
acccctaagcaaggacagcctgggagggagagaaatgctgataacattctcagggatttg
aaggagatttttactccctcctgggaactggcttccccttctgaagcactggctggcaag
ctgaaagagatccaggaggccaaggctcccagcccttccatccacaggcaggccagcatc
gagacagaccgagtgtccaaggagttcatagaattcatcaggacgtaccagaagcctggc
caggatatctacaagcaatgcaaactctttttggacaccatgagtcataaaagggaatta
agcattgaggaacaatctgaatgtgcccaggacttctaccagaacgtagcagacaggctg
cagacacgttggaaagtgccccctgaaaaggtggagaaggcaatggatgaggttgagaaa
tacatcatgacccgccagtataaatatgttttttgccctgagacaactgatgatgagaag
aaagaccttgctgtccaaaaaaggatcagggccttgcactgggtgactccccagatgctg
tgtgttcctgtcagtgaggagatcccagaagtctctgacatggttgtgaaggcaattaca
gatatcattgagatggactccaagcgcgtccctcgggataaactggcctgcatcaccaag
tgcagcaagcacatcttcaatgccatcaaaatcaccaaaaatgagccagcctctgccgat
gatttcctgcccaccctgatttacatcgtgctgaaggggaacccgccgcgcctgcagtcc
aacatccagtacatcactcgcttctgcaaccccagcaggctgatgactggggaggatgga
tattatttcaccaacctgtgctgtgctgtggccttcattgagaaactggatgctcagtct
ttaaatctgagccaggaggattttgatcgtttcatgacgggccagacctccccgaaaaag
caggaatctgacagcttctcccctgatgtgtgcctgggggtgaagcaaatgtgcaaaagc
ttagacctcctctctcagttgaatgagagacaggaaagaattgtcagtgaagccaagaag
ctggagaaagacctcatcgattggactgacgggatcgccaaggaggtggaggacatcgtg
gagaaataccccttagaaataaaaccaaaaagtcaagccttggcagccattgactctgaa
aacgtggagaatgacaagctgcccccaccactgcagcctcaggtttatgcaggataa
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