Hirundo rustica (Barn swallow): 120761378
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Entry
120761378 CDS
T09369
Symbol
NCOR1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120761378 (NCOR1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hrt01009
]
120761378 (NCOR1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hrt03036
]
120761378 (NCOR1)
Protein phosphatases and associated proteins [BR:
hrt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120761378 (NCOR1)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
120761378 (NCOR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
120761378
NCBI-ProteinID:
XP_039938494
LinkDB
All DBs
Position
19:3467127..3524094
Genome browser
AA seq
2533 aa
AA seq
DB search
MSSSGYPPNQGAFSTEQSRYPPHSVQYTFPSTRHQQEFAVPDYRSSHLEVSQATQLLQQQ
QQQQQLRRRPSLLSEFHPGSDRPQERRTGYEQQFHPGPSQTDHDSLESKRPRLEQVSDSH
FQRVSAATVLPLVHPLQEGLRSADIKKDPAFGGKHEGPSSPISGQPCGEDQNASPSKLSK
EELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPERPVSPPPVEQKHRSIVQI
IYDENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHENIKTNQVMRKKLILFFKRRNH
ARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQREQQER
FQRVGQRGAGLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDAEQRRVKFI
NMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKEKFVQHPKNFGLIASYLERKNVPDCVLYY
YLTKKNENYKALVRRNYGKRRGRNQQQIARPSQEEKVEEKVEEEKSDKSEKKEEEKKDEE
EKDEKEESKENTKEKDKTEVAPEEPEEREQAAPRGRKTANSQGRRKGRITRSMTNEAAQA
NAAAAAATEEPPPPLPPPPEPSSTEPVETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGT
KSEAQCKNFYFNYKRRHNLDSLLQQHKQKSSRRPREERDVSQCESVASTVSAQEDEDIEA
SNEEENPEDSEGAENSSDTESAPSPTPAEPAKPTEETPSEPAAPKVTTEAPAEQESAIKP
AASTSPSLPAQSVSTAETQNPEPQVKEEINTEAEEPMEVDSRSHSAEAKPVITLPVHTKV
EPVETEVRLPENIQVKIESDTKEREMEKPKEKSEPEEMDYSLSQQVPTARPESHSDNDSS
ATCSADEEVDGEPDRQGIFSRESKPSLLNPTGSILVSSTIKQGQMDLQQLHHRAAVIPPM
VSCSPCPVPVGTPVSGYALYQRHIKAMHESALLEEQRQRQEQLDMEYRSAVSPCGTSKSP
SVEWEGKPVAYMPYAEVKRIEQEAQVQNPATRSASPYRLSPREVNKASPQPEMNAARYSV
PPVLQPAPHQVITNIPEGVRLPTTRPTRPPPPLIPSSKTSVPSEKPSFIMGGSISQGTPG
TYLTSHSQASYAQETAKPSVGSISLGLPRQQESAKSASLPYIKQEEFSPRSQNSQPEGLL
VRAQHESVVRGTTTIQEGSITRGTPTNKVSVETIPSLRGSITQGTPALSQSGIAADALLK
GTITRLATEDSSPEKCREEASAKGHVIYEGKSGHILSYDAIKNVREGTRSPRTAHEIGLK
RTYDTMEGNIKQGMSLRESPGSAPLEGLICRALPRGSPHAELKERTVLSGSIMQGTPRAT
AESFEEGLKYPKQIKRESPPIRTFEGAITKGKPYDGVTTIKEMGRSIHEIPRQDLLSQES
RKTPEMVQTARPIIEGSISQGTPIKYESNSGQSAIKHNVKSLITGPSKLPRGMPQLEMVP
ENVKVVERGKYEDVKTGDAVRSRHTSVVSSGPSVLRSTLHETPKSQLSPGIYDDTNARRT
PVNYQSPMSRSSPMMNRVSEAGVSSGKPANHERKNTLTPTQRESVPAKSPVPGVDPVVAH
SPFDPHHRGATPEVYRGHLPPHLDPAMPFHRALDPAAAAYLFQRQLSPTPGYPSQYQLYA
MENTRQTILNDYITSQQMQVNLRPDVTRGLSPREQTLALPYAGARGIIDLNNMAPTILVP
HPGGTSTPPMERITYIPGTQLTFPPRPYNPASLSPGHPTHLAASAAANAEREREREREKE
RERERERERERERERERERERITSVPAELYLRPGAEQPGRPGSHGYVRSPSPSVRSQENI
LQQRPSIFQGTNGTSVITPLDPAAQLRIMQLTPGAPSITQGLPASRYNTAADALAALVDA
AASAPQMEVAKAKENKHEGTRIEENMGRRSAVVTDQQQMEQKTLEVEKRPVQCPYTSANY
SGGKSQGQTSSVVYSEAGKEKGPPPKSRYEEELRTRGKTTITAANFIDVIITRQIASDKD
ARDRGSQSSDSSSSLSSHRYEAPGDAIEVISPANSPAPAQEKLQPYQQETPKQSQAETDP
NRPYEGPIHRYRTQQEPPSPQQPPPPSSQAEGMAHVPRTHRLITLADHICQIITQDFARN
QAASQASLQPPTTTFQNSTPAPAPVSGRAKSSNRYSPEAQSQPVHHQRPGARVSPENLSD
KARGRPGKSPERSHVPSEPYEPISPPQVPVVHEKQENVLLLSQRTEPTEQRTDSRSPGSI
SYLPSFFTKLENTSPMVKSKKQEIFRKLNSSGGGDSDMATAQPGTEIFNLPAVTTSGAVS
SRGHSFADPASNLGLEDIIRKALMGNFDDKSEEHGVVMSQPLAVAPGSSGAAVPASNEAR
REEANPSPNSGGAVSKQKLIGKSNSRKSKSPIPGQGYLGTERPSSVSSVHSEGDYHRQTP
VWAWEDRPSSTGSTQFPYNPLTMRMLSSTPPTSMACAPPSMSQATTHPQNRIWEREPAPL
LSAQYETLSDSDD
NT seq
7602 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttcaggctaccctccgaaccaaggagctttcagcacggagcagagccggtac
ccgccccactctgtgcagtacaccttccccagcacccgccaccagcaggaatttgccgtt
cccgactatcgctcctctcacctggaagtcagtcaggccacgcagctcctgcagcagcag
cagcagcagcagcagctccggcgcaggccctccctgctctccgagttccacccaggctct
gacaggcctcaggaaaggaggactggatatgagcagcagtttcatccaggtccatctcag
acggatcatgattcactggaatctaagcgaccacgtcttgagcaagtgtctgattcccat
ttccagcgtgtcagtgcagccactgtcttacctttagtgcatcctctgcaggaagggttg
agatctgcagatattaagaaggacccagcttttggaggaaagcatgagggaccatcttct
ccaatttctggtcaaccttgtggggaggaccaaaatgcttcaccttccaagctgtcaaag
gaggaattgatacagagcatggaccgcgtagatcgtgaaattgcaaaagtggaacagcaa
atcctgaaactgaagaaaaagcaacaacaacttgaagaagaagctgctaagcctcccgag
ccggagaggccggtgtcccctcctcccgtggagcagaagcaccgcagcatcgtgcagatc
atttacgatgagaatcggaaaaaagcagaagaagctcacaagatttttgaaggtcttggt
ccaaaagttgaattgccactgtacaaccaaccctcagacaccaaggtctaccatgaaaac
atcaaaacaaaccaggtgatgaggaaaaagctgatcctattctttaaaagaaggaaccat
gcaagaaaacaacgggaacagaaaatctgtcaacgttacgatcagctgatggaggcatgg
gagaagaaagtagacaggatagaaaataatccacgcaggaaagccaaggagagcaaaaca
cgggagtactatgagaaacaattcccagaaatccggaagcagagagaacagcaagaaaga
ttccaaagagttggccaaagaggggctggcctttcagcaaccatcgctagaagtgaacac
gagatttcagaaatcatcgatggactctctgagcaggagaataatgagaagcaaatgcgc
cagctctctgtcatccctcccatgatgttcgatgcagagcagagaagggtgaagttcatc
aacatgaacgggctgatggaggatcccatgaaggtttataaagacaggcagttcatgaat
gtctggacagatcatgagaaggagatttttaaggaaaagtttgtccagcatccgaagaac
tttggtctaattgcttcctacttggaacgaaagaatgttcccgactgtgtattatattat
tatttgaccaagaaaaatgaaaattataaagcccttgtgcgaaggaattatggcaaacgc
aggggaagaaaccagcagcagattgcccgtccttctcaagaagaaaaggtagaagaaaag
gtagaagaggaaaaatcagacaaatcagaaaaaaaagaggaggaaaagaaagatgaggag
gagaaggatgagaaggaggaatctaaagagaataccaaagaaaaagacaaaactgaagtc
gcaccagaggagccagaggaaagggagcaggcggctcctcggggccgaaaaactgccaac
agccaaggtcggcgtaagggcagaatcaccagatcaatgacaaatgaagctgcacaggca
aatgctgctgcagctgcagccactgaagagccaccaccgcctctgccacccccaccagaa
ccttcttctacagagcctgtggagacatcccgctggacagaagaagaaatggaagttgct
aagaaaggtctagtggaacacggacgaaactgggcagccattgccaaaatggttgggacg
aaaagtgaagctcagtgtaagaacttctacttcaactacaaaaggagacacaacctggac
agtctcctccaacagcacaaacagaagtcttcgcgaaggccccgagaggagcgagatgtg
tcacagtgtgagagtgtggcttcaactgtgtcagcccaggaggatgaagatattgaagca
tctaatgaggaagagaacccagaagacagtgaaggtgctgaaaatagttctgatacagaa
agtgctccatctccaactccagcagaacctgctaaaccaactgaagaaactccatccgag
cctgctgctccaaaagtaaccactgaggccccagcagagcaggaatctgccattaaacct
gcagccagcacatctccctccttaccagcccaaagtgtatcaacagctgaaacacagaac
cccgagccacaggtcaaggaagaaatcaacactgaggctgaagagccaatggaggtggac
agcagaagccattcagctgaagctaagcctgtgattactcttccagttcataccaaagta
gaacctgtagagactgaagtgaggctaccagagaatattcaagtgaaaatagagagtgat
accaaagagagagagatggagaaacccaaggaaaagtcagaaccggaggagatggactac
agcctgtcccagcaggttcctacagccagaccagaatcccattcagacaatgactccagt
gccacctgcagtgctgatgaggaagttgatggagaacctgacagacagggtatcttcagc
agagagtcaaagccctcacttttaaatcccactgggtcaattctggtctcatccacgata
aagcaagggcagatggacctgcaacagcttcaccaccgagctgctgtcatcccacccatg
gtttcctgcagcccttgccctgtccccgtgggcaccccagtgagcggctacgctctctac
cagcggcacatcaaggccatgcacgagtcagccctgctggaggagcagcggcagcgccag
gagcagctggacatggaatatcggagcgctgtgagcccctgtggcacctccaagagcccc
agtgtggagtgggaaggaaaaccagtggcctatatgccttatgctgaggtcaagagaata
gaacaggaagcacaagtgcaaaatccagccacaaggtcagcatcaccctacaggttatct
ccaagagaagtcaacaaagcctctccccagcctgagatgaatgcagctcgctacagtgtc
cctccagttctccagccagcccctcaccaggtgataaccaatattcccgaaggagttcgc
ctgcccacaaccaggcccaccagaccaccaccacctctcattccatcctccaaaaccagt
gtgccatcagaaaagccttccttcatcatgggaggctcgatctcacaaggaacacctggc
acttatttaacatcccacagtcaagcttcctacgcccaagaaactgcaaagccatcagtg
ggttctatatcccttgggctgccaaggcagcaagagtcagccaaatcagcttccctgccc
tatatcaaacaagaagaattctcacccagaagtcagaattcccaacctgagggactcctg
gtcagggcacaacatgaaagtgtggtgcgaggtaccacaacaatacaggaggggagtata
acacgaggaactccaaccaataaagtttcagttgagaccattccttctttgagaggctcc
ataactcagggtacccccgctctgtcccagtccggcatcgccgccgacgcgctgctgaag
ggaaccatcactcgcctggccaccgaggacagcagcccggagaagtgcagggaggaggcc
tcagccaagggccatgtcatttatgaaggcaaaagtgggcatattctatcttatgatgct
attaaaaatgtccgtgaaggaacaaggagtccaagaactgctcatgaaattggtttaaag
agaacctatgatacaatggaaggaaatataaagcaggggatgtcactgagggagtctcca
ggatctgcaccactggaaggtttaatctgccgagcgctgcctcggggtagcccacacgct
gaactgaaggagagaacagtcttgtctggttctataatgcaaggcacaccaagagcaaca
gctgaaagttttgaagaaggtttgaagtaccccaaacagatcaagagagagtcacctccc
atcaggacgttcgaaggagccatcaccaagggcaaaccctacgatggggtcaccaccata
aaggagatgggtcgctctatccacgagatcccaaggcaggacctgctaagccaagagagt
cgcaagactcccgaaatggtgcagacagccaggccaatcatagaaggctccatatctcag
ggcacacccataaaatatgaaagcaactctggccagtctgccatcaaacacaatgtaaaa
tctttaatcactggaccaagcaagctgccccggggaatgcctcagctggaaatggtgcca
gaaaacgtgaaggtggtggagcgaggaaaatacgaagatgtgaagaccggggacgccgtg
cggtcccgtcacacgtcagtagtcagctctggtccctctgtcctcaggtcaactcttcat
gaaactcccaaatcacagctgagccctgggatttatgatgatacaaatgctcggaggaca
cctgtgaactatcagagtccaatgtccaggagttcacctatgatgaatagagttagtgag
gctggagtatcttctgggaagccagcaaatcatgaaaggaagaacacactcactccaaca
cagagggagagtgtgccagcaaaatctccagtccctggggttgatcctgtagtggctcac
agtccttttgaccctcaccacagaggagcaactcctgaagtctacaggggtcacctccct
ccccatttagatcctgctatgccatttcacagggccctggatcccgctgctgctgcttac
ctgttccaaaggcagctgtcccccacgccggggtaccccagccagtaccagctgtacgcc
atggagaacacgcgccagaccatcctcaacgactacatcacctcccagcagatgcaagtg
aacctccggcccgatgtcaccagggggttgtcccccagggagcaaactttagcactcccc
tatgcaggagcacgaggaattattgacctgaacaatatggcccccactatcttagtgcct
catcctggaggaacgagcaccccacccatggagagaatcacatacatccctggcacccag
cttaccttccctcccaggccttacaaccctgcctctctgtcaccaggacaccccacacac
ctggcagcttctgcagctgcaaatgctgaaagggaacgggaaagggaaagggagaaggag
cgggaaagggagagggaacgcgaacgagagcgggaaagagaacgagaacgtgagagggag
agaatcacctcagtccctgctgaactttatctccgaccaggtgcagagcagcctggcaga
cccggcagtcacggatacgtccggtccccatccccctctgtcagaagccaggaaaacatt
ctgcagcaaaggccaagtattttccaaggaaccaatgggacaagtgtaatcacacctttg
gatcctgctgctcagctacgtatcatgcagctcacccctggagctccctctatcactcaa
ggcttgccagcttcccgttacaacactgctgctgacgccctggcagcactggtggatgct
gcagcctctgctcctcagatggaagttgccaaagcaaaggagaacaagcacgaaggaacc
aggatagaagagaacatgggacgccggtcagctgtggtgactgaccagcagcagatggag
cagaagaccctggaggtagaaaagaggcctgtgcagtgcccctatacatctgcaaattac
tctggtggcaagtcccagggacagacttcatcagtagtctattcagaggctggtaaagag
aaaggacctcctcctaaatccaggtacgaggaagagctgagaactcgaggaaagaccaca
attactgctgctaacttcatagatgtgatcatcactcgccagattgcttcagacaaggat
gctcgagataggggctctcaaagttcagattcttccagtagtttgtcctcacaccggtat
gaagctcctggagatgccattgaggtgatcagccctgcaaattcacctgcacctgctcaa
gaaaagctacagccctatcaacaagagacacccaaacaaagccaggcagagactgacccc
aacaggccgtacgagggccccattcaccgctacaggacacaacaggagcccccctcaccc
cagcaacctccacctccctcttcccaggcagaggggatggcccacgtgcccaggacccat
cggctcatcacccttgctgatcacatctgtcaaattatcacacaagactttgctagaaac
caagcagcttctcaggcctctttgcagcctcccaccactacattccagaattccacccct
gctccagcgcccgtttctggccgggcaaagagctcgaaccgctacagccccgaggcgcag
tcgcagcccgtgcaccaccagcggccgggggccagagtgtcccctgagaacctctctgac
aaggccaggggaaggcctggaaaatctccagagaggagtcacgtcccctcagagccctac
gagccaatctctccacctcaggtcccggttgtacacgagaaacaggaaaatgttcttttg
ctttcccaaagaactgagcctactgaacagaggactgactctcgctctccaggcagtatc
agttacctgccttcgtttttcaccaaacttgagaacacttcaccaatggtaaaatccaag
aaacaggagatatttcgaaagctgaactcatctggtggaggtgactctgacatggcaact
gctcagccagggactgaaatattcaatttgccagcagtcactacctcaggtgcagtcagt
tctaggggtcactcctttgcagatcctgccagtaatctgggtctggaagacattattagg
aaagcactgatgggaaactttgacgacaagagtgaggagcacggggtcgtcatgtcccaa
cctctcgcggtggctccgggcagctccggcgccgcggtaccggcgagtaacgaggcacgc
agggaagaagccaatccatctccaaattcaggtggggcagtcagcaagcagaagctcatc
ggcaagtcaaacagtaggaagtcaaagtctccgattcctgggcagggatatttgggaact
gaaagaccttcttctgtctcatctgtgcattcagaaggggactaccacagacagactcca
gtgtgggcctgggaagacaggccttcatcaacaggttccacccagtttccatacaacccc
ctgaccatgaggatgctgagcagcacccccccgacctccatggcctgtgcccccccgtcc
atgagccaagcaaccactcacccacagaacaggatctgggagcgagagccggcaccgctg
ctttcagcacaatacgagactctgtctgacagtgatgactga
DBGET
integrated database retrieval system
