Hirundo rustica (Barn swallow): 120761393
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Entry
120761393 CDS
T09369
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrt03021
]
120761393 (SUPT6H)
03036 Chromosome and associated proteins [BR:
hrt03036
]
120761393 (SUPT6H)
Transcription machinery [BR:
hrt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
120761393 (SUPT6H)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
120761393 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
120761393
NCBI-ProteinID:
XP_039938538
LinkDB
All DBs
Position
19:complement(4323916..4349625)
Genome browser
AA seq
1719 aa
AA seq
DB search
MSDFVESEAEESEEEYNQDGEVVPRVTKKFVEEDEDDEEEEELNLDDQDEQGNLKGFIND
DDDEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVRKM
SDDEDDEAEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVEAPVAPQEEEEEEEEDESDIDD
FIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEEEYEYE
DEETEGETRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRMTDMPERFQLRSI
PVKSAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQASSFSRKGPSTIQKIKEALN
FMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQAYQ
YEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNAAKA
ARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQAAGLDGLAKKFGLTP
EQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGARYMVALQIAREPLVR
QVLRQTFQERAKINISPTKKGKKDIDEAHYAYSFKYMKNKPVKELRDDQFLKMSLAEDEA
LLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQFLYV
QMAKELKNKLLVEAKEYVLKACSRKLYNWLKVAAYRPDQQVEEDDDFMDENQGKGIRVLG
IAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKFLLNK
KPHVVTIAGENRDAQMLVEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSENEF
RDYPPLLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNALYCEFI
NRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTMCHM
GPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDA
NPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTPYRS
PNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQ
DNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAGFIPTKFLSDKVVKRPEERVKVGMTV
HCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDSEAADHKQEEDMKRKQQRT
TYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQHVDV
REEGKENAFSLGSMLWINTEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGDKKKL
EELLIKTKKEKPTFIPYFISACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQVFPT
VNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTSQM
FSAIAAVTGQGQNPNATPAQWGSSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPSYSY
TTPSQPITTPQYQLQANTTPQSSQSQPSSSSRQRQQPKTNSHAAIDWGKMAEQWLQEKEA
ERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcgtggagagcgaagcagaggagtcagaggaggagtacaaccaggatgga
gaggttgtgcccagagtaaccaagaagtttgtagaggaagatgaggatgatgaggaagag
gaggagctgaacctcgatgatcaggatgagcaggggaacctgaaaggattcattaacgat
gatgacgatgaggaagaggaggaggaagccagtgactctggagactccgaggatgacgtt
ggccacaaaaagagaaagcgcacttttgatgaccgtctggaggatgatgactttgacctc
attgaagaaaacttgggcgttaaagtcaaaagacaaaaattcaggcgtgtgcgaaaaatg
tccgatgacgaggacgatgaagcggaagattatggcaaggaagaacacgagaaggaagcc
attgctgaagaaatctttcaggatggtgaaggcgaggaaggaggggaagctgtggaagct
cctgttgctccacaggaggaggaagaggaggaggaggaagatgaatctgacattgatgac
ttcatcgtggatgatgatggacagcctctgaagaagccaaaatggagaaagaagcttcca
ggatacacagatgctgctttgcaggaagcccaggaaatctttggcgtggactttgactac
gatgagtttgagaagtacaacgagtacgacgaggagatggaggaggagtacgagtacgag
gatgaggaaaccgagggggagacgcgcgtgcggcccaagaagacgaccaagaaacgcgtc
agtcgccgcagcatcttcgagatgtacgagcccagtgagctggagagcagccacctcacc
gaccaggacaacgagatccgcatgacagacatgcctgagaggttccagctgagatccatc
ccggtgaagagtgctgaagacgatgagctggaggaagaagctgactggatttataggaat
gcatttgcaacgcccaccatctccctgcaggaaagttctgactaccttgaccgtggacaa
gccagcagcttcagccgcaaggggcccagcaccatccagaagattaaagaagccctgaat
ttcatgagaaatcagcattttgaggtcccgttcatcgccttctacagaaaggaatatgtg
gagccagagctgcacatcaacgacctgtggagggtctggcagtgggatgaaaagtggacc
cagctgaagatccgcaagcagaacctgacacgactgtttgagaagatgcaggcctaccag
tatgagcaaatctctgctgacccagacaagcccttggctgatggaataagggccttggat
actactgacatggagaggctgaaggacgtgcagtccatggacgagctgaaggatgtgtac
aatcacttcctgctctactatggcagagacatccccaagatgcagaacgccgccaaggcc
gctcgcaaaaagcaaaagcgtatccgggaggatggtgaagaagaggaaggtgaaggggag
gatgcagaggatgatgagcagaaggggcctgagctgaagcaggcttcccggagggatatg
tacaccatctgccaggcagctgggctggacggcttggctaagaaatttggtctgacacct
gagcagtttggagagaatctccgagacagttaccagcgtcacgagacagagcagttccct
gcggagcccctggagctggccaaggattatgtgtgcagtcaattcccaagcccggaggca
gtgctggagggagcgcggtacatggtggctctgcagatcgccagggagcccttggtcaga
caggtcctgagacagactttccaggaacgagctaaaatcaacatttcaccaaccaaaaag
gggaagaaggatattgatgaagcccactatgcctattcctttaaatacatgaagaacaag
cctgtgaaggagctgagggatgaccagttcctgaaaatgagcctggcagaggacgaggca
ctgctcaccatagatatcagcattgacatgaaaggagtggagggttatggcagtgaccag
acgtactttgaggaaatcaagcagttctattaccgggatgagttcagtcaccaggtgcag
gagtggaatcggcagcgcaccatggccatcgagcgctccctcaaccagttcctctacgtg
cagatggccaaagaattaaagaacaagctcttagtggaggccaaggaatacgtcctcaag
gcttgcagccgcaaactgtacaactggctaaaggttgctgcctacaggccagatcagcag
gtggaggaagacgatgatttcatggatgaaaaccaagggaaggggatccgggtgctcggc
attgcgttttcatcagccagggaccaccccgtgttttgtgccctcgttaatggagagggt
gaggtgacagatttcctccgattgccacatttcacaaagaggaggaatgcctggcgtgag
gaggagagggagaagaaggcccaggatattgaaacgttgaaaaaattcctcctgaacaag
aagcctcacgtggtgacaattgcaggcgagaacagggatgctcagatgctggtggaggat
gtgaagagaattgttcatgagctggaccaggggcagcagctgtcctcgatcggagtggag
ctggtggacaatgagctggccatcctctacatgaacagcaagaagtctgagaatgaattc
cgggattacccccctctgctgcgccaggccgtgtccctcgctcgccgcatccaggacccc
ctcatagagtttgcccaggtctgcagctctgatgaggatattctctgcctgaaactccac
cctctgcaggagcacgtggtgaaggaggagctgctgaacgctctctactgcgaattcatc
aaccgtgtgaacgaggtgggggtggatgtgaacagggccattgctcacccccacagccag
gctttgctgcagtacgtctgtggcctgggaccacgcaaaggcactcacctgctgaagatc
ttaaaacaaaacaacacccgtctggagaacaggacccagctggttacgatgtgtcacatg
ggacccaaagtgtttatcaactgtgctggcttcatcaaaattgacacagcctcactgggt
gatagcactgattcctacatagaagtcttagatggctctagggtccaccctgagacctat
gaatgggcaaggaaaatggcagtggatgctctggaatacgatgaatcagctgaggatgca
aatcctgcaggagctctggaggagatcctggaaaacccggagcgcctgaaagacctggat
ctcgatgcctttgctgaagaactggaaagacagggctacggtgacaagcacatcactctg
tatgacattcgggctgagctaagctgcaggtacaaggacctgagaaccccgtaccgttct
cccaacaccgaggaggtcttcaatatgctgaccaaagaaactccagagacattttacata
ggtaaaatgatcatctgcaatgtgactgggattgcccacaggcgcccacagggagagagc
tacgaccaggcgatacggaatgatgaaactggcctttggcagtgccctttctgccagcag
gacaacttcccagagctcagtgaggtttggaaccattttgacagcggttcctgcccaggt
caggccattggagtgaagacacgtctggataatggtgttgctggcttcatcccaacaaaa
tttcttagtgacaaggtggtcaagaggccagaagaaagggtgaaggtgggaatgaccgtc
cactgccgcatcatgaagatcgacattgagaaattcagcgcagacctgacctgcaggacc
tcagacctcatggacaagaacaacgagtggaaactgcccaaggacacctactacgacttc
gactccgaggcagcggatcacaaacaggaagaggacatgaaaagaaagcagcagaggacg
acgtacatcaagagggtaattgctcacccatcattccacaacatcagcttcaagcaagca
gagaagatgatggagaccatggaccaaggggatgtgattatccggccgagcagcaaaggg
gagaaccatctgactgtcacctggaaggtcaacgatggcatttaccagcacgtggatgtc
cgggaagagggcaaggagaatgccttcagcctgggctccatgctctggattaacacagag
gaatttgaagacctggatgaaattgttgctcgttatgtccagccaatggcttcttttgcc
agagacctgttgaaccacaaatactatcaggactgcaatggtggagacaagaagaagctg
gaagagctgctgataaagaccaagaaagagaagccaacatttattccgtacttcattagt
gcctgtaaagatctacctggtaaattcctcttgggatatcagcctcgaggcaaaccaagg
atagagtatgtgacagtgacaccagagggattccgctaccggggccaagtcttccctact
gtgaatggacttttccgatggtttaaggatcattatcaggaccctgttccaggcattacc
cccagcagtagcagtcggaccaggactccagcctccattaacgctactccagctaacatc
aacctggcagacctgacacgtgcagtgaacgctctaccgcagaacatgacctcccagatg
ttcagtgccatcgctgctgtgacaggccagggacagaacccgaatgccaccccggcacag
tggggctccagccagtacggctacggaggcagcggaggcggcagcagcgcgtaccacgtc
ttcacgactccagcacagcagccggtggccacccctctgatgacccccagctactcctac
actactcccagccagcccatcaccacgccccagtaccagctccaggccaacaccacaccc
cagtcctcccagtcacagccatcctccagctccaggcagaggcagcagccaaagaccaac
agccacgctgccatcgactggggcaagatggccgagcagtggctgcaggagaaggaggct
gagcggaggaaacagaagcagaggttgacccctcgcccctctcccagccccatgatcgag
agcacgcccatgtccatcgccggggacgccacgcctctcctggatgagatggatcgatag
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integrated database retrieval system
