Hirundo rustica (Barn swallow): 120761421
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Entry
120761421 CDS
T09369
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120761421 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120761421 (SCARF1)
Membrane trafficking [BR:
hrt04131
]
Endocytosis
Phagocytosis
Scavenger receptors
120761421 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_Teneurin
EGF_PEAR1L
EGF_2
Motif
Other DBs
NCBI-GeneID:
120761421
NCBI-ProteinID:
XP_039938577
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All DBs
Position
19:4838472..4846089
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AA seq
872 aa
AA seq
DB search
MESARPILCLQLWLWVQSSAQELDPEGRNVCRFPAGPACCPGWKQDGRACTLAVCEGEDA
CSEGEVCVKPGLCRCKPGFFGADCSSRCPERYWGHDCKRSCPCHPNGRCDPVSGRCTCDP
HHWGGLCQFPCQCGPHGRCDPLSGACHCEPGWWAPGCRKQCQCNPSTSQCDPQTGLCRCL
PGWWGRRCSFKCSCNVSPCAQETGKCECLAGFWGPACQRRCDCGHGSCSPVSGHCSCEPG
YQGRSCREPCPAGKYGSQCVHSCGSCKRSQPCSPVDGFCLACQPGWNGTLCKDPCAPGFH
GEGCLQPCPRCLHGEPCDPQTGSCLRCDPGWTGPSCNSSCPVGTFGDGCQFLCPECVSGS
CDPVTGVCICQAGYWGDSCNDTCPEGYFGVNCSSPCQCSRGTCDPVQGDCVLSLKDHGAL
AAAILVPLLLLLLCVACCCCGAGSADARDRAAVPDDDVVARMKHHVQGVLANLSALMPCF
NLGSSKLPKVTVSHHDTEIPFNPSFIEPPSSAWVSDSSFSSFDTDNEGPEYSVPPREGIP
LLGGAELQDGASPPGQALPDPSAFDSEDVSQPFAIPRTSSIAKAKRPSVSFAEGTKFGAA
ETPSPSRKPKAPWSPSRMTPPPGDAGAETPGERPASDCYENPEPLSKGDESHRPSPRATP
GGRRRVVTGTRHVAQRVEALEAAAKSGTWEAKGKEPNVTTIYMMVGTAGQDPRAEGTGEG
RVQAVLKRLGSLQRGKWAAKEEPKVRRSMEAIQKPPRRALAQRRDSENSCKHGESVPGAP
AESAPGRHQQTAAKRLSLLLASLSSKNTGAQDGAGETAGATEKGKSPELAGSLERKGQAA
AEEEPKYENVASSGADSPSGPGKELPAAPPAT
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgcccggcccatcctctgcctccagctgtggctgtgggtgcagagctctgcc
caggagctcgaccctgagggcaggaacgtctgcaggttcccggccggcccggcgtgctgc
cccggctggaagcaggacgggagggcgtgcacgctggccgtgtgcgagggggaggacgcc
tgcagcgagggcgaggtgtgcgtgaaacccgggctgtgccgctgcaaacccggcttcttc
ggagcagactgcagctcccgctgccccgagcggtactggggccacgactgcaagcggagc
tgcccgtgccaccccaacgggcgctgcgaccccgtgagcggccgctgcacctgcgacccc
caccactggggagggctgtgccagttcccctgccagtgcggcccccacggccgctgcgac
cccctgagcggcgcctgccactgcgagccgggctggtgggcgcccggctgcaggaagcaa
tgccagtgcaacccctccacctcccagtgcgacccccagaccgggctgtgccgctgcctg
ccgggctggtggggcaggaggtgcagctttaagtgctcctgcaacgtctcgccctgcgcg
caggagacgggcaagtgcgagtgcctggctggcttctggggaccggcgtgccagcggcgc
tgcgactgcgggcacggctcctgcagccccgtcagcgggcactgcagctgcgagcccggc
taccagggcaggagctgccgggagccctgcccggcagggaaatacggctctcagtgcgtg
cacagctgcgggagctgcaagcgcagccagccctgctcgcccgtggatggcttctgcctg
gcctgccagcccggctggaacgggaccctctgcaaggatccctgtgctcctggattccac
ggggagggctgtctccagccgtgtccccgctgcctgcacggggagccctgcgacccccag
accgggtcctgcctgcgctgtgatcccggctggacgggccccagctgcaacagctcctgc
cccgtgggcacctttggtgatggctgccagttcctctgtcccgagtgtgtttcggggagc
tgtgaccccgtgacaggagtttgcatctgccaggcaggctactggggagacagctgcaat
gacacctgtcccgaggggtattttggagtgaattgttcctcgccctgccagtgctcccgg
gggacctgcgaccctgtgcagggtgactgtgtgctgagtttgaaggaccacggagccctt
gcagccgccatcctcgtccctctcctgctgctgctgctctgtgtcgcctgctgctgctgc
ggtgccggctcagcagatgccagagacagggcggcagtgccggacgatgatgtggtggcc
aggatgaagcaccacgtgcagggggtgctggccaacctcagcgctctcatgccctgcttt
aacctggggagctcgaaactgcccaaagtcacagtttcgcatcacgacacggaaatcccc
ttcaaccccagcttcatcgagccaccatcttctgcgtgggtttcagacagctccttctcc
tccttcgacaccgacaacgagggacccgagtactccgtccctcccagagaaggcatcccg
ctgctgggaggggctgagctgcaggatggggcatcccctcccggccaggctctcccggac
ccgtccgccttcgactccgaggacgtctcgcagcccttcgccatcccccgcacctccagc
atcgccaaggccaagcgaccctccgtgtccttcgccgaggggacaaaattcggggcggcc
gagacgcccagccccagccggaagcccaaggctccgtggagcccgtccaggatgacccca
ccgccgggggacgcgggggccgagacccccggcgagcgcccggccagcgattgctacgag
aaccccgagcccctcagcaagggggacgaaagccaccggccatcgcctcgggccaccccg
gggggacggcgcagggtggtgaccggcaccaggcacgtggcccagagagtggaggcgctg
gaagcggctgcgaaatccggcacctgggaggcgaaggggaaggaacccaacgtcaccacc
atctacatgatggtgggaacggccgggcaggaccctagggcggaggggactggcgaggga
cgcgtccaggctgtgctgaagcgtctgggcagcttgcagaggggcaagtgggccgccaag
gaggagcccaaggtgaggaggagcatggaggccatccagaaacctcctcgccgggccctg
gcgcagcgcagggactcggagaacagctgcaagcacggggagagcgtgccgggggctccc
gccgagtcagcccctggcaggcaccagcagaccgctgcaaagagactgtccctcctcctt
gcatctctctcgtcaaaaaacaccggagcccaggacggggccggcgaaaccgcaggcgcc
acggagaagggtaaaagcccggagttagccggcagcctcgaaaggaagggacaggctgcc
gcggaggaggagccgaaatacgagaacgtggccagcagcggtgctgattcgccgtccggc
cccggcaaagagctgccggccgctcctccggccacctga
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