Hirundo rustica (Barn swallow): 120761449
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Entry
120761449 CDS
T09369
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04142
Lysosome
hrt04144
Endocytosis
hrt05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120761449 (CLTC)
04142 Lysosome
120761449 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120761449 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120761449 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hrt04147
]
120761449 (CLTC)
Membrane trafficking [BR:
hrt04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
120761449 (CLTC)
Exosome [BR:
hrt04147
]
Exosomal proteins
Proteins found in most exosomes
120761449 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
120761449
NCBI-ProteinID:
XP_039938632
LinkDB
All DBs
Position
19:complement(2620497..2650097)
Genome browser
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQSDFPVAMQISDKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAQHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLMVLSPRLDHTRAVTFFT
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLQE
NKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEKVDKL
DASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGY
SM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatcctgcccatccgcttccaggagcatctccagctccaaaatctgggcatc
aacccggcaaacattgggttcagcactctgactatggagtctgacaaattcatctgcatc
agagagaaagtaggagaacaggctcaagtggtgatcattgacatgaatgaccccagcaac
cccatccgaagaccaatttcagctgacagtgctatcatgaaccctgccagtaaagtcatt
gcattgaaagctgggaaaacgctgcaaatcttcaacatcgaaatgaagagcaagatgaag
gctcacaccatgacagacgatgtcaccttctggaagtggatctctctgaacactgttgcc
ctcgtgacggataacgccgtctaccactggagcatggaaggggagtcccagcccgtgaag
atgtttgatcgccactccagccttgctggctgccagatcatcaactacaggaccgatgcc
aagcagaaatggctcttgctgactggaatatctgcacagcaaaaccgtgtagtgggagca
atgcagctgtactctgtggacagaaaagtgtcccagcccatcgagggacatgcagccagc
tttgcacagttcaagatggaaggcaatgctgaagaatccactctcttctgttttgcagta
agaggacaagctgggggtaagctgcatatcattgaggttggcacaccacccactgggaat
cagccctttccaaagaaagctgtggatgtcttctttcctcctgaagcacagagtgacttc
cctgttgctatgcagatcagtgacaagcacgatgtggtgttcctcataacgaagtatggc
tacatccacttgtatgacctggaaactggcacctgtatctacatgaacaggatcagtgga
gagaccatttttgttactgcacagcacgaagcaacagctggaattattggagtcaacaga
aagggacaagtgctctcagtgtgcgtggaagaggagaacatcattccctacatcacaaac
gtgctgcagaatcctgacctggctttacggatggctgtccgcaacaacctggcgggggcc
gaggagctctttgccaggaaattcaatgcactctttgcacaagggaactattcagaggca
gcaaaagtggcagctaatgccccaaagggaatcctgcgtactccagacaccatacgccgg
ttccagagtgttccagcccagccagggcagacttcccctctcctgcagtattttggcatt
ctgctggaccaagggcagctgaacaagtatgagtcactggagctctgcagaccagtgctc
cagcagggccgcaagcagctcctggaaaaatggttaaaagaagataagctggagtgctcg
gaggagctgggagacctcgtgaaatctgtagatcctacgctagcacttagtgtctatctg
agagccaacgttccaaacaaggtcatccagtgttttgctgaaacaggacaagtccagaag
attgttttgtatgctaagaaggttggatatactccagactggatttttttgctgaggaat
gtaatgagaatcagccctgatcaaggccagcagtttgcacaaatgctcgttcaagatgaa
gagcctcttgcagatataacacagattgtggatgtctttatggaatataatttaatccag
caatgtacagcctttctgctggatgcactgaagaataatcgtccctcagaaggtcccctg
caaacacgtttacttgagatgaacctcatgcacgcgcctcaggttgcagatgccatcctg
ggaaaccaaatgtttactcactatgaccgggctcacatagctcagctgtgtgagaaggct
ggtttgctgcagagagcactcgagcacttcacagacctctacgacatcaagcgtgcggta
gttcacactcacctcctcaatcctgagtggttagtgaattattttgggtccttatcagtg
gaagactctctggagtgtctgcgtgcgatgctgtccgctaacatccgccagaacctgcag
atctgtgtccaggtagcctccaaataccacgagcagctgtcaacacagtcactcattgag
ctctttgagtccttcaagagctttgaaggtttgttttatttcctgggctccattgtaaac
ttcagccaggatccagatgtgcacttcaagtacattcaagctgcgtgcaagacaggacaa
attaaagaagtggaaagaatctgcagggaaagtaactgctatgatccagaacgtgttaaa
aacttcctcaaggaagctaaactcactgaccagctgcctctcatcattgtgtgcgaccgc
tttgactttgtccacgacttggtgctgtatttgtatagaaataatctgcaaaaatacatt
gagatttatgtacagaaggtgaatccgagccgtctgccagttgttattgggggactgctg
gatgtggattgctctgaagacgtgataaagaacctcatccttgtagtgagaggtcaattt
tcaactgatgaacttgttgcagaggttgagaaaagaaacaggctgaagctgcttctgccc
tggctggaagcaagaattcacgagggctgtgaggagcctgccactcacaatgcactggcc
aagatatacattgacagcaacaacaacccagagagattcctgcgtgagaatccctactat
gacagtcgtgttgttggcaagtactgtgagaagagggaccctcacctggcctgcgtggcc
tacgagcgtggacagtgtgatctggagctgatcaatgtgtgcaatgagaactccctcttc
aagagcctctcccgctacttagttcgtcgtaaggaccccgagctctgggccagtgtgctg
ctggaaagcaacccctacagaagacccctgattgaccaggttgtgcagactgcgctgtca
gagacccaggaccccgaggaagtgtctgtcactgtgaaggccttcatgactgcggatctt
cccaatgagctcattgagctgctggagaaaatagttctggataattcagtgttcagtgag
cacaggaatctgcagaaccttctcatccttacggctatcaaggctgaccgcacccgtgtc
atggagtacatcaatcgcctggataactatgatgcccctgacatagccaatattgctatc
agcaatgagctttttgaagaggcatttgctatcttcaggaaatttgatgtcaacacatca
gctgtacaggtgttgattgagcacattgggaacctggaccgtgcgtacgaattcgccgag
cgctgcaatgagcctgcagtgtggagccagctggccaaagcacagctccagaaggggatg
gtgaaggaagcaattgactcctacattaaagcagatgatccttcctcatacatggaagtt
gttcaagctgctaatgccagcggaaactgggaagagctggtgaagtatctgcagatggca
cgcaagaaggcccgggagtcatatgtggaaacagaattaatctttgctcttgctaaaaca
aaccgcctggcagagctggaggagttcatcaatggccccaacaatgcacacatccagcag
gttggtgatcgctgctacgatgagaagatgtatgaggcagccaagctgttgtacaacaac
gtctccaacttcggccgtttggcctcgaccttggtgcacctcggcgagtaccaggcagcc
gtggatggcgctcggaaagccaacagcactcgcacgtggaaagaggtctgctttgcttgt
gtggatggaaaagagttccgcctggctcagatgtgtgggctccatatcgtagtgcatgca
gatgagctggaagagctaatcaactattaccaggatcgtggctactttgaagagctgatc
actatgttggaagcagcgcttggactggagcgagcacacatggggatgttcacagagctg
gcaattctctactccaagttcaagccacagaagatgagggagcacttggagctgttctgg
tccagagtcaacattcccaaggttctgagagctgcagaacaagcccatctctgggctgaa
ctggtgttcctgtatgataaatatgaggagtatgataatgccatcatcacaatgatgaat
caccccacagatgcttggaaagaaggccagttcaaagatatcatcacgaaggtggccaat
gtggagctgtactacaaggcagttcagttctatttggaatttaagcctctgttgctcaat
gatctgctgatggtgttgtcccctcggctcgaccacactcgtgctgtcaccttcttcaca
aaggttaaacagctgcccctggttaaaccttacctgcgctctgttcaaaatcacaacaac
aaatcagtcaatgagtccctcaacaacctcttcattattgaagaagattatcaggctctt
aggacttctatagatgcttacgacaactttgacaacatttctctcgcccaacgtctggag
aaacacgagctcatagagttccggagaatcgccgcttatctcttcaaaggcaacaaccgc
tggaaacagagcgtggagctctgtaagaaggacaggctgtacaaggatgccatgcagtac
gcttccgaatccaaagatactgagctggcagaagagctgctgcagtggttcttgcaggag
aacaagagggaatgctttggtgcttgtctcttcacctgctacgatctcctaaggccggat
gttgtcttggaaacagcgtggaggcacaacattatggactttgccatgccatattttatt
caggtcatgaaggaatacttgaccaaggttgatgcaataaaggaaaaggtggataaactg
gatgcatcagagtctttgagaaaggaagaggagcaagccacagaaacacaacctattgtt
tatggccagccccagctgatgctgacagcaggacccagcgtggcagttcctccacaggca
cctttcggctacggctacacggcccctccctacgggcagccacagcccggcttcggctac
agcatgtga
DBGET
integrated database retrieval system
