Hirundo rustica (Barn swallow): 120761463
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Entry
120761463 CDS
T09369
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120761463 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hrt04040
]
120761463 (TRPV1)
Ion channels [BR:
hrt04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120761463 (TRPV1)
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GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_5
Ank_4
PKD_channel
Motif
Other DBs
NCBI-GeneID:
120761463
NCBI-ProteinID:
XP_039938658
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Position
19:complement(3324900..3336853)
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AA seq
844 aa
AA seq
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MSSILGKMKKFGSFDMEESEVTDEHTDGEDSVQETPDNPQGPPSTKVQPPKSNIFARRGR
FVMGDSDKDMAPMDSFCQMDHLMAPSAIKFHVNLERGKLHKLLSTDSITGCSEKAFKFYD
RRRIFDAVAQGNTKDLSDLLLYLNRTFKHLTDEEFKEPETGKTCLLKAMLNLHDGKNDTI
PLLLDIARKTGTLKEFVNAEYTDNYYKGQTALHIAIERRNMYLVKLLVQNGADVHARACG
EFFRKIKGKSGFYFGELPLSLAACTNQLCIVKFLLENPYQAANIAAEDSMGNMVLHTLVE
IADNTKDNTKFVTKMYNNILILGAKINPILKLEELTNKKGLTPLTLAAKTGKIGIFAYIL
RREIKDPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEILAYSSETPNRHEMLL
VEPLNRLLQDKWDRFVKHLFYFNFFVYTMHITILTAAAYYRPVQKDGKPPFTFGYSTGEY
FRVTGEILSVLGGLYFFFRGIQYFMQRRPSLRTLIVDGYSEVLFFVHSLLLLSSVVLYFC
GQELYVASMVFSLALGWANMLYYTRGFQQMGIYSVMIAKMILRDLCRFMFVYLVFLLGFS
TAVVTLIEDDNEGQDTNISEYARCCHVKRGRTSYNSLYYTCLELFKFTIGMGDLEFTENY
RFKSVFVILLVLYVILTYILLLNMLIALMGETVNKIAQESKSIWKLQRAITILDIENSYL
NCLRHSFRSGKQVLVGITPDGQDDYRWCFRVDEVNWSTWNTNLGIINEDPGYSGDLRRNA
SFSLKPGRVSGRHWKTLVPLLKDGEKRREEPHKLPEEVKLKPVLEPYFEAEDSEGLKESI
PKSV
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccattcttgggaagatgaaaaagtttggcagttttgacatggaggaatctgaa
gtgacagatgaacacacggatggggaggactctgtccaggaaacccctgacaacccccag
ggcccacccagcaccaaggtgcagccacccaaaagcaacatttttgccaggcggggccgc
tttgtgatgggggacagtgacaaggacatggctcccatggactccttctgccagatggat
cacctgatggcaccttctgccatcaaattccacgtcaatttggagaggggcaaacttcac
aagctcctgtctacagattccatcacaggctgctcagaaaaagctttcaaattttatgac
cgcagaaggatctttgatgctgtggcccaaggcaacacaaaggacctcagtgacctgcta
ctctaccttaatagaaccttcaagcatctcactgatgaggagttcaaagagcctgaaact
ggcaaaacctgtttattgaaagccatgctgaatctacatgacgggaaaaatgataccatt
cccttgctgctggatattgcaaggaaaactgggactctgaaagagtttgttaatgcagaa
tatactgacaactactacaagggccagactgctcttcacatcgccatcgagaggaggaac
atgtacctggtgaagctcctggtccagaacggagcagatgttcatgccagagcctgtggg
gagttcttcaggaaaatcaaagggaaatctggcttttattttggagagctgcctttgtcc
ctggctgcctgcaccaaccagctctgcattgtgaaattcctcctggaaaatccctaccag
gcagccaacatcgctgctgaggactccatgggcaacatggtcctgcacacactggtggag
attgcagataacaccaaggataacaccaagtttgtaaccaagatgtataataacatattg
atccttggtgccaaaattaatcccatcctcaagctggaagaactcaccaacaagaaaggg
ctgactcctttaactctggcagccaaaacagggaagatagggattttcgcttacatcctc
agacgggaaatcaaagaccccgagtgcagacacttgtccaggaagttcactgaatgggcc
tatggacctgtccactcctctctttatgacctgtcctgtatagacacctgtgagaaaaac
tcagtgcttgagatccttgcctacagcagtgagacaccaaaccgtcacgagatgctgctg
gtggagccccttaacaggctgctgcaagacaagtgggaccggtttgtcaagcacttgttt
tacttcaacttctttgtctacaccatgcacatcaccatcctcactgctgctgcttactac
agacctgtacagaaggatggaaagcctcccttcacctttggctacagcactggggaatac
tttcgagtaactggagagatcctgagtgtactgggaggcctctatttttttttcagaggg
atccagtatttcatgcagaggcgcccatcactcaggacactgatagttgatggctacagt
gaggttcttttctttgtccactccctgctcctcctgagctctgtggtgctgtacttctgt
ggccaggagctctacgtggcctccatggtgttctccttggccctgggctgggccaacatg
ctctactacacgcggggcttccagcagatgggcatttactccgtcatgatcgccaagatg
atccttagagatttatgtcgcttcatgtttgtctatcttgtattcctcttgggattttct
acagctgtggtgactttgattgaagacgacaacgaggggcaggacacaaatatctctgag
tatgcccggtgctgccacgtgaaacgaggccgcacctcctacaacagcctctactacacc
tgcctggagctcttcaagttcaccattggcatgggggacctggagttcacagagaactac
aggttcaagtccgtgtttgtcatcctgctggtgctctatgtcatcctcacctacatcctc
ctgctcaacatgctcattgctctgatgggggagactgtcaacaaaattgcacaggagagc
aagagcatctggaaactgcagagagccatcaccatcctggacattgagaacagctacctg
aactgtctgaggcactccttccgctcggggaagcaagtcctggtggggatcacacctgat
ggccaagatgattacagatggtgcttcagggttgatgaggtgaactggtccacgtggaac
actaatctgggcataatcaacgaagaccctgggtactctggggacctcagacgaaatgcc
agtttctctcttaagcctggcagagtttcagggaggcactggaaaacgttggttccactt
ctaaaagatggagagaagaggagagaagagcctcacaagctgccagaagaagtcaaatta
aaacctgttttggaaccttattttgaggcagaagattctgaggggttgaaagagtcaatt
ccaaagtcagtctaa
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