Hirundo rustica (Barn swallow): 120761472
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Entry
120761472 CDS
T09369
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03440
Homologous recombination
hrt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120761472 (BRIP1)
03460 Fanconi anemia pathway
120761472 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrt03400
]
120761472 (BRIP1)
Enzymes [BR:
hrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
120761472 (BRIP1)
DNA repair and recombination proteins [BR:
hrt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
120761472 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
120761472 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
HBB
ARCH_RTEL1
Motif
Other DBs
NCBI-GeneID:
120761472
NCBI-ProteinID:
XP_039938680
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All DBs
Position
19:complement(2331200..2422968)
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AA seq
1277 aa
AA seq
DB search
MPSGGAEYTIGGVKILFPCKAYPSQLAMMNAIVKGLNNRQHCLLESPTGSGKSLALLCSA
LSWQQALYEKSVPTSSCDKERRKAAPSPPCHCKCHSQPRSSQAAASGTPSAPRSAHSPDA
GTSRKAGTPLTNAECKEKETLASKLSAKKKLSLCDSENDDFQVDRKRIRPLETEQQQVRK
RHCFAKGVQLVDALEVYHQRKNGELTVHSEKSKKNATSSPQTPPGPCTECSCSSGKEPDK
DPSHTKKKENEDRLCVPKIFFGTRTHKQITQISRELKRTAYSCVPMTILSSRDYTCIHPV
VSNSSNRNEMCVELLEGKHGKSCSYYHGVHKLTEHHALQPVYQAWDIEDLVGLGRKLRAC
PYFAARELMVGADIVFCPYNYLLDPQIRDSMDIKLKDQVVILDEAHNIEDCARESVSYGV
TESQLQAAREELDVMVNNSIRQKHHEPLRAVCCSLINWLQESSGQLVERAYETACKVWSG
KEMLSFLHKMGITEITFPILQNHLAAVLEKEENVSMHGREELIEVPVVSPATQIVLKGLF
MVLSCLFKEKSRFADDYRVALQQTYTWMTENQRDDANTSSLFTRPKHRKNSRQKTLVHML
NFWCLNPAVAFSDLNEARTIVLTSGTLSPMDSFSSELGVKFSIQLEANHVIRNSQVWVGT
VGAGPNGRKLCATFQHTETFEFQDEVGALLLSVCQTLGQGILCFLPSYKMLDKLKDRWMH
TGLWGKLEDVKTVIAEPQGGAKSDFDELLKIYYDAIKCKGEKDGALLIAVCRGKVSEGLD
FCDENARAVVTIGIPFPNVKDLQVELKRKYNDQHKSTRGLLSGSQWYEIQAYRALNQALG
RCIRHRNDWGALILVDDRFRNNPNKYITGLSKWIRQQLQHHGSFGSALESLHAFALRNQG
GGDPSSEHSTQLPAPARDLSQGSQQEAAVPLSPDVPAGSQEQNLGSEVRGAETVSSVRAA
AWDQPSDGLATPKQSEREVDVDSHSPHVEQRRKHMDCTPQTPAIKTETEKMNGWTNADVV
EEICCSEPLTSTPVAKSCRATAGSRQEPVRGPGDLIDHFNQCQSSLTAEHEPSGPESRLE
TTHFSLKNAEAPAAEGHPGKLQLPAEPCREFPAAAGRAEPSALSVDEDEDESIYFTPELY
DDADPEEQRTEAPVPACCTAGNWVECGSPTVPADLLATDTSETQDVTEKAEAGRSPRGIL
ENVRSRDSAVGAVEVAAGGEQGGSQEMDTPKRKLSLSRSRNKGLKVQRRYSRRKAALRPS
GSSRERKVPHPWIKYLF
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgccttctggtggggcggagtatacaattgggggggtgaagatcctcttcccctgcaag
gcttacccctcccagctcgctatgatgaatgctattgtgaaaggcctgaataacaggcag
cactgtttgctggagagccccacaggaagtggcaaaagcttggcattactttgttctgca
ttatcgtggcagcaggctttgtatgagaaatcagtgccaacgtcgtcgtgtgacaaggag
cgcaggaaggcagcgccgtccccgccgtgtcactgcaagtgtcactcccagcctaggagc
agccaggctgcagccagtgggactcccagtgctcctcgttctgcccattctcctgacgca
ggaacttccagaaaagctgggaccccactgacaaacgcagaatgtaaggaaaaggaaacg
ctggcttcaaaactgtctgccaaaaaaaagttatcactttgtgacagtgagaacgatgat
tttcaagtggacaggaaaaggattcgtcctttagagacagagcagcagcaggttagaaaa
cgtcactgctttgcaaaaggagtgcagttggttgatgctttagaagtttatcatcagaga
aaaaatggagagctgacagttcactctgaaaaaagcaagaaaaatgctacttcttctccc
caaacacctcctggcccttgcactgagtgttcctgttcttcggggaaagaacctgataaa
gatcccagccacacaaagaagaaagaaaacgaagatcggttgtgtgttcccaaaattttt
tttgggacacgaacacacaagcaaataacccagatcagcagggagctgaagaggacagcg
tactcctgtgtccccatgacaatcctttccagcagggattatacctgtattcatccagtg
gtgtccaacagtagtaacaggaatgaaatgtgtgtagaattgctggaaggaaaacatggc
aagtcctgctcttactaccacggtgttcacaagctcactgagcaccatgccctgcagcct
gtgtaccaggcctgggacattgaggacctggtgggcctgggcaggaagcttcgtgcctgt
ccctattttgcagccagagagctcatggtgggagcagacatcgtgttctgcccttacaat
tatctcctggacccgcagatccgggacagtatggacattaagctaaaggaccaagtagtc
atcttggatgaagcccacaacattgaggactgtgctcgggagtccgtgagctacggggtc
accgagagccagctgcaagctgcccgagaggagctcgatgtcatggtcaacaacagcatc
aggcagaagcatcatgagcccctccgagctgtgtgctgctccttgataaactggttgcag
gagagctctgggcagctggtggagagagcctatgaaactgcctgtaaggtgtggagtggc
aaagaaatgctcagctttttgcacaaaatgggaataactgagattacttttcccatttta
cagaatcatcttgctgctgttctggaaaaagaagaaaacgtatccatgcatgggagagag
gaacttattgaggtgccagttgtgagccctgcaacacagatcgtgctcaaaggcctgttc
atggtcctttcctgtctcttcaaagagaaaagcaggtttgcagatgattacagggttgct
ctacaacaaacttacacctggatgactgaaaaccaacgtgatgatgcaaacacaagttcc
ttgttcacgaggcccaagcacagaaagaattcaaggcagaaaacccttgtgcacatgctg
aatttttggtgcttgaaccctgctgtggctttttctgacttaaacgaagcgagaacaatt
gttctgacatcgggcacgctctctcccatggattccttttcctcagagctcggtgtgaag
ttttccattcagctggaggccaatcacgttatccggaattcccaggtttgggttggcacg
gtcggagcgggccccaacgggcgcaagctgtgtgcgacgttccagcacaccgagaccttc
gagttccaggacgaggtgggagcgctgctgctttcagtctgtcagacacttggccaaggc
attttgtgctttttgccatcctataagatgctggacaagctaaaggatcgttggatgcac
actggcttgtggggaaagctggaggatgttaaaacagtcattgcagagccccagggaggg
gccaagagtgactttgatgagctgctgaaaatctactatgatgcaatcaaatgtaaagga
gaaaaagatggagctctcctgatagctgtgtgcagagggaaggtcagcgaggggctggat
ttctgtgacgagaacgccagggcagttgtgaccatcggaatcccctttccaaacgtgaag
gaccttcaggttgaattgaagaggaagtacaatgaccagcacaaaagtacaagaggcctt
ttatcagggagtcagtggtatgaaattcaagcttacagggctctaaaccaagccctggga
aggtgtataaggcacaggaatgactggggggctcttattttagttgacgaccgcttcagg
aataaccccaataaatacataacaggattatccaagtggatccgtcagcagctccagcac
cacggcagcttcggcagcgctctggagtcgctgcacgccttcgccctgaggaaccagggc
ggtggggatccctcctcagagcacagcacccagctccctgcacctgccagggacctctct
cagggctctcagcaagaggccgccgtccctctgtccccagatgttcctgctggaagtcag
gagcaaaatttgggctcggaagttcgtggcgctgaaaccgtcagctcggttcgtgccgca
gcgtgggatcagccaagcgacggcctggcaacgccgaaacaaagtgagcgggaggttgat
gtagacagccactctccccatgtagaacagagaaggaaacatatggactgcaccccccaa
actccagcaattaaaacagagacagaaaaaatgaatggttggaccaatgctgatgttgtg
gaagagatttgctgctctgagccgctgacctcaactcctgtagccaagagctgcagggcc
acagcaggcagcagacaggagcctgtgagggggcctggtgaccttattgatcatttcaat
caatgccaatcatcattaactgcagaacacgaaccaagtggaccagaatcacgtttggaa
acaactcatttttcacttaaaaatgctgaggctccagctgctgaaggacatcctgggaag
ctgcagcttccggctgagccctgcagggagttcccagcagcagcagggagagctgagcct
tcagcattaagtgtggatgaggatgaggatgaaagcatttacttcaccccagaactctat
gatgatgcagacccagaggagcagagaactgaagccccagttccagcctgctgcactgct
gggaattgggtggaatgtgggagccccacagtccctgctgatcttcttgccaccgacacc
tcagaaacacaggatgtgactgagaaagctgaggctggcagaagtccccgtggaattctg
gaaaatgtgaggagcagggacagtgcagttggtgctgtagaggtggcagcaggaggagag
cagggaggatctcaggagatggacacccctaaaaggaaactcagcctttccagatcccga
aataaaggattgaaagttcagaggagatacagcagaaggaaagctgcccttaggccaagt
ggctcctcccgagagagaaaggtaccacatccatggattaaatacctgttctga
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