Hirundo rustica (Barn swallow): 120761473
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Entry
120761473 CDS
T09369
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120761473 (EXOSC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120761473 (EXOSC7)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120761473 (EXOSC7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
120761473 (EXOSC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
120761473
NCBI-ProteinID:
XP_039938689
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All DBs
Position
1:complement(110375703..110402792)
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AA seq
290 aa
AA seq
DB search
MASVVLSEAEKLYIVHGVQEDLRVDGRGCEDYRCAEVETDVVSNTSGSARVKLGETDILV
GIKAEMGTPKLEKPDEGYLEFFVDCSSNSPELEGRGGEELGTDIANTLYRVFSCENTVDL
KSLCINPKEHCWVLYVDVLLLECGGNIFDAISIAVKAALFNTRIPKVRVLEDEEGTKEIE
LSDDPYDCIRLNVDEVPCIVTLSKIGYRHVVDATLQEEACSLASLLISVTSKGAITSLKK
VGKGSLDPESIFEMMETGQRVGKSLHTALQKILDEEESLGTSRPKVGFLG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtggtgctgagcgaggcggagaagctctacatcgtgcacggcgtgcaggaa
gaccttcgtgtagatggtcgaggctgtgaagactacagatgtgcagaagtagaaacagat
gttgtatcaaacacaagtggatctgcaagagtaaagctgggagaaactgatatcttggta
ggcataaaagctgaaatggggacaccgaagttggagaaaccagatgaaggttacctggaa
ttttttgttgactgttcttcaaattctcctgagttggaaggccggggaggagaagaactt
ggcactgatatagcaaatacactgtacagagtattcagctgcgagaacactgtagacttg
aaatccctttgtattaaccccaaagagcactgctgggttctctatgtggatgtattgtta
ttggaatgcggtgggaacatcttcgatgcaatctctattgcagtgaaggctgctctcttt
aacacaagaatacccaaagtgcgtgttctggaggatgaagagggcaccaaagagattgag
ctgtctgatgacccttatgattgtattcgactcaacgtagatgaggtgccctgcattgtc
acactaagcaaaattggatataggcacgtggtagatgctacccttcaggaagaagcctgt
tctttggcaagcctgcttatttccgtgaccagtaaaggtgccatcacttctttgaagaag
gtggggaaaggtagcctggatcctgagagtatttttgaaatgatggagacaggacaaaga
gtaggcaagtcacttcacacagcccttcagaagattttggatgaagaagagagtttgggg
acttcacgaccaaaagttggatttctgggatga
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