Hirundo rustica (Barn swallow): 120761587
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Entry
120761587 CDS
T09369
Symbol
GAPVD1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120761587 (GAPVD1)
Membrane trafficking [BR:
hrt04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120761587 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
DUF6245
DUF5996
Motif
Other DBs
NCBI-GeneID:
120761587
NCBI-ProteinID:
XP_039938876
LinkDB
All DBs
Position
20:complement(791273..820303)
Genome browser
AA seq
1486 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVTSEKQLIQRLNADVLKTAERLYRTAWISKQQRINLDRLII
TSAEASPAECCQHAKVLEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKL
NQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDANKLIERFSPVQQEKLFGEKGT
EKFKQRVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGD
PHTKSNLAKFDKSCVAAFLDVVIDGRAVETPPLSAVNLLEGLSRTVVYVTYSQLTALVGF
MRNVMSSDQLKEDRMALENLLANLPQNKPGKSSSLEMTPYNTPQLSPATTPANKKNRLPI
GQQLAAITAWDTSATNLSAHITLVTPFATRSRSRSNMDQHGDHEGSSQDTIPEVQPEEVL
VISLGTGPQITPGMMSENEVLNMQLADGGQGDVPIDENKIHGKPDKTLRFSLCSDNLEGI
SEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEI
RDMMGLTDDRDISETVSETWSTDVLGSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPGSG
SVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDVRE
VSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDETAHGASQLT
SPPSQTDSLLALFDPLSSNEGVSAVVRPKVHYARPSHPPPDPPILEGAVGGNEARLPSFG
SHALIPTDLEAFKQRHSYPERLVRSRSSDIVSAVRRPMSDPGWNRRAGNEERELPVASSS
TGAAVLAAASQSSSSSPSKDSSRGEIEERKDSDDEKSDRNKPWWKKRFVSAMPKAPIPFR
KKEKQEKDKDDMVPDRYATLQDDPSPRLSAQAQAAEDILDKYRNAIKRTSPSEGAIVNYD
SAEAIGDGESMHDSPRDEALQNMSADDLPDSASQVAQPQGSAFSYRDAKKKLRLALCSAD
SVALPMLTHSTRNGLPDHTDPEDNEIVCFLKVQLAEAINLQDKNLMAQLQETMRCVSRFD
NRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTV
CVRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDAIWQNASEEQLQD
AQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHKALQIPEVYLREA
PWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIK
ANPPCLLSTVQYISSFYANCLSGEESYWWMQFTAAVEFIKTIDDRK
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctggacatccacacgctggcccatcacctgaagcaggagcggctgtacgtg
acctcggagaagcagctgatccagcgcctcaacgccgacgtgctgaagacggcggagcgg
ctgtaccgcacggcctggatctccaagcagcagcgcatcaacctcgacaggctcatcatc
accagtgctgaagcctctcctgcggaatgttgccagcacgcaaaagtcttggaggacaca
cagtttgtggatggatacaagcagctgggattccaggagacggcttacggagaattcctg
aacagactgcgagagaaccccaggctcattgcatcctgcttggttgccggggagaagctc
aaccaggacaacacccagagcgtcattcacacggtctttacctccatttatggcaactgc
atcatgcaggaggatgagagttacctcctgcaggtgctgcgctacctgattgagtttgaa
ctgaaggaaagcgacaaccccaggcggctgctgagacgaggcacctgtgccttcagcatc
ttgttcaagctcttctccgaaggactcttttctgcaaaactttttcttactgccacctta
cacgagccgatcatgcagcttctggttgaggatgaagaccacctggagaccgatgcaaac
aaattaattgagagattctcccctgtacagcaggaaaagttgtttggagagaaaggcaca
gaaaagttcaagcagagagtccaagagatggttgactccaatgaggccaagctggtgacc
ttggtcaacaaattcattggctatctcaaacaaaacacgtactgttttcctcacagcctg
aggtggatcgtgtcgcagatgtacaaaacgctgtcgtgcgtggacaggctggaggttggc
gaggtcagagccatgtgcacggatctcctcctggcctgcttcatctgccctgccatcgtc
aacccggagcagtacggcatcatttctgatgctcctataaatgaggtggcaagatttaat
ctgatgcaggttgggagacttctacagcagctggcaatgacaggttctgaggagggagat
ccacatacgaagagcaaccttgctaaatttgacaaaagctgcgttgctgctttcctggac
gtggtgatcgacgggcgcgcggtcgagactccgccgctgtcggccgtgaacctgctggag
gggctgagccgcaccgtggtgtacgtgacctacagccagctcactgccctggttggcttc
atgcggaacgtgatgtcaagcgatcagcttaaggaagaccggatggctttggaaaacctg
ctggcaaatttaccccagaacaaaccggggaaaagcagcagccttgaaatgactccgtat
aataccccccagctttctcctgcaactactccagctaacaaaaaaaaccgactgcccata
ggacagcagttggcagcgattactgcctgggatacctctgctaccaatctgtcagctcac
ataactctagtaaccccttttgccactcgaagcagaagtagatcaaacatggaccagcac
ggagatcatgaaggatcctcccaggacactattccagaagttcagccagaagaagtgctg
gtgatttctttggggacaggtccacagattactccaggaatgatgtcagaaaatgaggtg
ttaaatatgcagcttgcagatggcgggcaaggagatgtccccatcgacgagaacaaaatc
catggtaaacctgataaaaccttgcgcttttccctctgcagtgataatctggaaggaata
tctgaaggcccttccaatcgctccaactccgtgtcgtctctggatctggagggggagtcg
gtgtcggagctgggcgcgggcccctccggcagcaacggcgtcgaggctctgcagctgctg
gagcacgagcaagccacaactcaggataacctggatgacaagctccgtaagtttgaaatc
cgtgacatgatgggtttgactgatgacagagatatttcagaaactgtgagtgaaacctgg
agcacagatgttttgggaagtgacttcgaccccaacatcgacgaggaccggctgcaggaa
attgcaggtgcagctgcagagaacatgctaggcagcttgctgtgtttgccaggttcagga
tccgtgttgcttgatccctgcacaggttcaaccatatcagaaaccacaagtgaggcgtgg
agtgtggaagtattaccaagtgattcagaggctccagatttaaaacaggaggaaagactg
caggagctggagagctgctctgggctgggcagcacgtctgatgacactgatgtgagggag
gtcagctctcggcccagcacccccggcctgagcgttgtgtcaggtattagtgcaacatct
gaagatattcccaacaagattgaggatctcaggtctgaatgtagctctgactttggggga
aaagattctgtaacaagtcctgacatggatgaaacagcccatggagccagtcagttgaca
tctcctccttctcagacagattctttgcttgcattgtttgaccctctgtcctcaaatgag
ggtgtgtcagctgtagtaaggcctaaagtgcattatgcaagaccctctcacccacctcca
gatccccccatcctggagggagccgtgggagggaacgaggcccgattgccgagctttggg
tctcacgctttgattccaacggacctggaagccttcaagcagaggcattcctacccggag
aggctggtccgcagcaggagctcggacatcgtgtccgcagtccggaggcctatgagtgat
cctggctggaacagacgtgctgggaacgaggagagggagctgcccgtggcctccagcagc
accggggcagccgtgctggccgccgcctctcagtcgtcatcgtcatctcccagcaaggac
tcctccaggggagagattgaggaacggaaagacagtgatgatgagaagtctgacaggaac
aagccctggtggaagaaacgttttgtgtctgccatgcccaaagctcctattccattcagg
aagaaagaaaaacaagaaaaagacaaagatgacatggtacctgacagatatgcaacgctt
caagatgatcccagcccaaggctcagtgcacaggcacaagctgctgaggacattctggac
aaatacaggaatgcaatcaagagaacaagtcccagtgaaggagccatagtgaactacgac
agtgcagaggccattggggatggtgagagcatgcacgactccccacgggacgaggctttg
cagaacatgtctgcagatgacctcccagactctgcaagtcaagtagctcagccacaaggt
tctgctttctcctacagggatgcaaagaagaaattgagattggctctttgttcagcagat
tctgttgccctcccgatgctgacacattcaacaaggaatggtctccccgaccacacagac
cccgaagataatgaaattgtgtgcttcttgaaagttcagctggctgaagccatcaacctg
caggacaagaacctgatggcacagctgcaggagacgatgcgctgcgtgagccgcttcgac
aaccgcacctgccgcaagctgctggcctccattgcagaggactacaggaaaagagctcca
tacatcgcttatttaactcgctgtcgccaaggcctgcagacgacacaggcgcacctggag
aggctcttacagagagtcctgcgagataaagaagtggccaacagatacttcaccacagtc
tgtgtgaggttactgctggagagcaaggaaaagaaaataagggagttcattcaagatttc
cagaaactcacggcagcagatgacaaaacagcccaagtagaggattttctccagttcctg
tacggggctatggctcaggatgccatatggcagaatgccagcgaggagcagctccaggat
gcacaattagccatcgagcgcagtgtgatgaatcgcattttcaaactcgccttctaccct
aatcaggatggagacattttgcgtgaccaggtccttcatgagcacatacagaggttatcc
aaagtagtgacggcaaaccacaaggcacttcagatccctgaggtgtatctccgggaggcg
ccgtggccgtcggcgcagtccgagatccgcaccataagcgcgtacaagaccccccgggac
aaggtgcagtgtatcctgaggatgtgctccaccatcatgaacctgctcagtctggccaac
gaggactccgtacctggggcagacgatttcgttcctgtcctggtctttgtcctcataaag
gcaaaccccccttgcctgctgtccactgtgcagtacatcagcagtttctacgccaactgt
ttgtctggagaggagtcgtactggtggatgcagttcacggcagccgtggagttcatcaaa
acgatcgatgatcgcaagtag
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