Hirundo rustica (Barn swallow): 120761644
Help
Entry
120761644 CDS
T09369
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04020
Calcium signaling pathway
hrt04080
Neuroactive ligand-receptor interaction
hrt04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120761644 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120761644 (GRIN1)
04082 Neuroactive ligand signaling
120761644 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hrt04040
]
120761644 (GRIN1)
Ion channels [BR:
hrt04040
]
Ligand-gated channels
Glutamate (ionotropic)
120761644 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Rap-GAP_dimer
Motif
Other DBs
NCBI-GeneID:
120761644
NCBI-ProteinID:
XP_039939014
LinkDB
All DBs
Position
20:10288668..10327727
Genome browser
AA seq
1049 aa
AA seq
DB search
MSAMRLLLLALLFSSSFARAGCDPKIVNIGAVLSTKKHEQIFREAVNQANKRHGTWKLQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIG
LTTRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKL
ETLLEEKESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTSLLLEAKELEARVI
ILSASEDDAATVYRSAAVLNMTGSGYVWLVGEREISGNALRYAPDGVIGLQLINGKNESA
HISDAVAVVAQAVHDLFEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGSNVLTNDRKIIWPGGETEKPQGYQMSTKLK
IVTIHQEPFVYVKPTQADGTCREEFTINGDPVKKVFCTGPNETIPGRPTVALCCYGFCID
LLIRLAGVMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINN
ERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLD
RFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAM
IIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELST
MYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIG
MRKDSPWKQNVSLAILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVA
GGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQRELRRRSKCIPEHALRTS
GIHFGYPRAVAEPDLVTPSPVGKVTLIGTKAIGEDSLPAPSAERGRAPRPAAPAPWRLVL
PACANQVRLANSNAYIFQFCFSLSSSRPDDIMALTLCFLPFFSFVFFFLFFFLVFFFFQF
PFCFLACFTLENKPNHHQQPRSALHNCII
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccatgcggctgctgctgctcgccctcctcttctcctcgtccttcgcccgcgcc
ggctgcgaccctaagatcgtcaatatcggcgcggtgctgagcaccaagaagcacgagcag
atcttccgcgaggcggtgaaccaggccaacaagcggcacggcacttggaagctccagctc
aacgccacctccgtcacccacaagcccaacgccatccagatggccctgtccgtctgcgag
gacctcatctccagccaggtctatgcaatattagttagtcaccctcctgctcccaacgac
cacctaacaccaacacctgtatcatacacagctggcttctacaggatccctgtcattggt
ctgacaacacgcatgtctatatattctgataagagcatccacctgtcctttttgcgcacg
gtcccaccttactctcaccaggccaacgtctggtttgagatgatgagagtcttcaactgg
aaccacgtcattctgatagtcagcgacgaccacgagggtcgtgctgcacaaaagaagctg
gagaccctcctggaggagaaagagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactttcctatgacaacaagcgaggacccaaggctgagaaagtgcttcagtttgaccct
ggaaccaaaaatgtgacatcgctgctgctggaggcgaaggagctggaggccagagtcatc
atcctctctgccagcgaggatgacgcggccacggtgtacagatcagcggccgtgctcaac
atgacgggctcgggctacgtgtggctggtgggcgagcgggagatctcgggcaatgccctg
cgctacgccccggacggagtgatcggtttgcagctcatcaacggcaagaacgagtccgcc
cacatcagcgacgctgtggccgtggtggcccaggccgtgcacgacttgtttgagaaggag
aatatcacagacccaccgcggggctgcgtgggcaacaccaacatctggaagacaggaccc
cttttcaagagggtgttgatgtcctccaagtactcagagggtgtcacaggccgggtggag
ttcaatgaggacggcgacaggaagtttgccaactacagcatcatgaacctgcagaatcgg
aaactggtccaggttgggatttacaatggcagcaatgtcctgaccaacgacaggaagatc
atctggcctgggggggaaacggaaaaacctcaaggctatcagatgtcaaccaagttgaag
attgtcaccatccaccaagagccctttgtgtatgtgaagcccactcaggcagatgggaca
tgcagagaagaattcaccatcaatggagatcctgtcaaaaaggtcttctgcaccggaccc
aatgagaccatcccaggccgtcccaccgtggcactgtgctgctacggcttctgcatcgac
ctgctcatccgcctggcaggggtgatgaacttcacctatgaggttcacctggtggctgat
ggtaaatttggtacccaagaacgggtgaacaacagcaacaagaaggagtggaacgggatg
atgggggagctgctgagcggccaagcagacatgattgtggctcccctcaccatcaacaac
gagcgggctcagtacattgagttctccaagcccttcaagtaccagggcctcaccatcctc
gtgaagaaggaaatcccccgcagcaccctggactcgttcatgcagcccttccagagcacg
ctctggctgctggtggggctgtctgtgcacgtggtggcagtgatgttgtacctcttagac
cggttcagcccgtttggccggttcaaagtgaacagtgaggaggaggaggaagatgccctg
actctctcctcggccatgtggttctcctggggagttctgctgaactctggcattggagaa
ggtgctccccggagtttttctgcccgtatccttggcatggtgtgggctggctttgctatg
atcattgtggcttcatacactgccaacctggcagccttcctggtgttagaccgacctgag
gagaggatcacaggcattaacgacccccggctgcgcaacccctcggataagttcatctac
gccacggtgaagcagagctccgtggacatctacttccgacggcaggtggagctgagcacc
atgtacaggcacatggagaagcacaactacgagagcgctgccgaagccatccaggcagtg
agggacaacaagctccacgccttcatctgggactcggcggtgctggagttcgaggcctcc
cagaagtgtgacctggtgacgacgggggagctcttcttccgctccggcttcgggatcggg
atgcgcaaggacagcccctggaagcagaacgtctccctggccatcctcaagtcccacgag
aacggcttcatggaggatttggacaagacttgggtgaggtatcaagagtgtgattcccgt
agcaatgccccagcaacactcacctttgaaaatatggcaggtgtgtttatgctggtggct
ggaggtattgttgccgggatatttttaatattcatagagatagcttacaaaaggcataag
gacgcgcggaggaagcagatgcagctggcgtttgcggccgttaatgtgtggaggaaaaac
ctgcagagagaactgagaaggaggagcaaatgtatccccgagcatgctctacgcaccagc
gggatacattttggttacccccgtgcggtagcagagccagacctggtcactccgtccccc
gtcggaaaggtcacactcattggcacgaaagcaattggggaggactcgttgccagcgccc
agcgccgagcgcggccgggccccccggcccgcggcccccgcaccatggcggctggtgctc
ccagcctgcgccaaccaggtccgactcgctaactccaacgcctacatttttcagttctgt
ttctctttgagttcatcccgacccgacgacatcatggcactaacgctttgcttcctccct
ttcttttcctttgtattttttttcctttttttttttttagttttctttttcttccagttt
cctttttgttttttagcctgttttactttggaaaacaaaccaaaccaccaccaacaacca
cgttcggctttgcacaactgcatcatttga
DBGET
integrated database retrieval system
