Hirundo rustica (Barn swallow): 120761692
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Entry
120761692 CDS
T09369
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120761692 (EXOSC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120761692 (EXOSC2)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120761692 (EXOSC2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
120761692 (EXOSC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
EXOSC1
Motif
Other DBs
NCBI-GeneID:
120761692
NCBI-ProteinID:
XP_039939187
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All DBs
Position
20:complement(4794562..4798728)
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AA seq
294 aa
AA seq
DB search
MAAVTMRLPAVRAPLSSSAPRGAEKHLVAPGDTITTDTGYMRGHGTYVEDDKLIASVAGV
VERVNKLVCVRALKARYNGEIGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSINLPGGE
LRRKSAEDELAMRDYLQEGDLISAEVQSIFSDGAVSLHTRSLKYGKLAQGVLVQVSPSLV
KRQKTHFHDLPCGASVILGNNGFIWIYPTPEQKDDEAGGYTANLEPVPLSDREVISRLRN
CIVALVTHKMMLFDTSILYCYEASLPHQIKDILKPEVTEEIVLEARQRLLDSEG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtcaccatgaggctgccggcggtccgcgcgcccctgagttccagcgcgccc
cggggcgccgagaagcacctggtggcaccgggggacacgatcaccacggacacgggatac
atgaggggccacggcacttacgtggaggacgacaagctgatcgcctcggtggccggcgtg
gtggagagggtgaacaagctggtgtgtgtcagggcgctgaaggccaggtacaacggcgag
atcggcgacatcgtggtcgggaggatcaccgaggttcagcagaagcgatggaaagtggaa
acaaattccaggctggattcagtcttgttgctgtcatctataaatttacctggtggggag
ctgagaagaaaatcagccgaagatgagcttgcaatgagggactacctgcaggaaggagat
ctcatcagtgcagaggtccagtccatattttctgacggggctgtatcgctgcacacccgg
agcctgaagtacgggaagcttgcccagggtgtgctggttcaggtctctccctcccttgtg
aaacgccagaagactcatttccatgacctgccctgcggtgcatccgtgatcctcggcaac
aacggcttcatctggatctacccaactcccgagcagaaggatgacgaggctggaggctac
actgccaacttggagccagttcccttgtctgaccgggaggtgatctcacggctccgaaac
tgcatcgtggctctggttactcacaagatgatgctctttgacaccagcatcctgtattgc
tatgaagcgtcccttcctcatcagatcaaggacattctcaaaccagaggtgacagaggag
attgttctggaagctcgacagaggttgctggattcggagggatag
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integrated database retrieval system
