Hirundo rustica (Barn swallow): 120761705
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Entry
120761705 CDS
T09369
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X3
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04010
MAPK signaling pathway
hrt04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120761705 (CACNA1B)
04020 Calcium signaling pathway
120761705 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hrt04040
]
120761705 (CACNA1B)
Ion channels [BR:
hrt04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120761705 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
120761705
NCBI-ProteinID:
XP_039939222
LinkDB
All DBs
Position
20:complement(8788708..9080239)
Genome browser
AA seq
2355 aa
AA seq
DB search
MARFGDDLPTRYGGGGPAGAGRGSSRQGGPQAGQRMYKQSMAQRARTMALYNPIPVKQNC
FTVNRSLFIFSEDNVIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPEGDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYMGK
FHKTCFSNETGEEVGDFPCGEEPPARQCESGTTCREYWQGPNYGITNFDNILFAVLTVFQ
CITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENR
RAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDGRAASEGPIPQGTAP
AETGSGSSYNMLKRAAIKKSKNDLIHAEEGEDHFTDICSVGSPFARASLKSGKNESSSYF
RRKEKMFRFFIRRMVKAQSFYWVVLCVVALNTLCVAMVHYDQPEKLTTALYFAEFVFLGL
FLTEMSLKMYGLGPRNYFHSSFNCFDFGVIVGSIFEVIWAAVKPGTSFGISVLRALRLLR
IFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTT
NFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVHSGMFSSIYFIVLTLFGNYTLLNVF
LAIAVDNLANAQELTKDEEEMEEATNQKLALQKAKEVAEVSPMSAANISIAAKQQNSSKS
KSVWEQRTSQIRMHNFRASCEALYNELDPEERVRYATTLHIRPDMKTHLDRPLVVEPRGE
GRNNITKLSPVDVQEVVEHPKPTSADGAEAPRKHHRHREKEKLGEQEKGDVTKDESGETG
TGNKEERHRQHRSRSKEVEGGSKEGKSDRNRGQEGGKRHHRRGSVEEGAEKEHRRHRGHR
HSSDRPGKEGNGTANGARGERRSRHRGGSRSGNRDGEPGAKGDSGEEPHRRHRLRNRALS
TYESVEKDSGDKDGEAGEKEHRNHQPKENQCELEASGSGSGPGSVPVHTLPSTYLQKVPE
QPEDADNQKNVTRMIQPPLDKTTTVNIPVTITAPPGETTVIPMNNVEFESKTEEKKDVDD
LTKNGPKPILPYSSMFILSPTNPIRRLFHYIVNLRYFEMVILIVIALSSIALAAEDPVQA
ESPRNDALKYLDYIFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFA
FSGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFI
FAVIAVQLFKGRFFYCTDESKELEKDCRGQYLDYEKNEVEAQPREWKKYEFHYDNVLWAL
LTLFTVSTGEGWPTVLKHSVDATYEEQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALI
IITFQEQGDKVMSECSLEKNERACIDFAISAKPLTRYMPQNKQSFQYKMWKFVVSPPFEY
FIMVMIALNTIVLMMKFYDAPEAYEEMLKCLNIVFTSMFSMECVLKIIAFGVLNYFRDAW
NVFDFVTVLGSITDILVTEIADNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFK
ALPYVCLLIAMLFFIYAIIGMQVFGNIALDDETSINRHNNFRTFLQALMLLFRSATGEAW
HEIMLSCLSNRACDPLSGLTKKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLT
RDSSILGPHHLDEFVRVWAEYDPAACGRISYTDMYEMLRHMSPPLGLGKKCPARVAYKRL
VRMNMPISPEDLTVHFTSTLMALIRTALEIKLASGGVKQHQCDAELRKEISLVWPNLSQK
TLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKNSREQVQPPGGLCQPGPVSLFHPLKAT
LEQTQPTTFSNAKAFLRQKSSASLNNGGALPPPEGGIKESSSWGTQRTQDVFYETRSPAF
ERGHSEEIPIERVVEMKEISPTVANGEPQPGLESQGRAASMPRLAAETQRSKARSPGSYL
APIPDTSPMKRSVSTLTPQRPHAMHLYEYSLERMPPEQGHHHHHHRCHRRKEKKQKSLDR
AAHHLADGQAVAQSGESSSRDKKQERGRSQERKQHSSSSSEKQRFYSCDRYGSRDRAQPK
SADQSRPTSPNGGPEHGPHRQGSGSVNGSPLLSTSGASTPCRGRRQLPQTPLTPRPSITY
KTANSSPVHFTTFQTPTFSPGRLSRGLSEHNALLRGEQQLPPPAVSRIGSDPYLGHRDAA
DSPQRAAPEDTLTFEEAVATNSGRSSRTSYVSSLTSQSHQIRRVPNGYHYTLGLNTGPGA
RGRSYYHEADEDDWC
NT seq
7068 nt
NT seq
+upstream
nt +downstream
nt
atggctcggttcggggatgatctgccgacccgctatggaggtggagggccggccggggct
ggaagagggagcagccggcaaggtggccctcaagccggccaaaggatgtataaacagtcg
atggctcagagagccaggactatggctctctacaaccccatccccgtcaaacagaactgc
ttcacagtcaacagatccctcttcatcttcagtgaagataacgttatacggaaatacgcc
aagcgaataacagagtggcctccatttgaatacatgattttagctacaatcatagccaat
tgtattgtgctggctctggaacaacatttgccggaaggagacaagacaccgatgtcagaa
agattggacgacactgagccgtactttattggaatattttgttttgaagctggtatcaag
atcatcgctctgggtttcgtttttcacaaaggctcctacctgcggaacggctggaacgtg
atggattttgtcgtggtcctcacagggattctggcgactgctgggactgattttgacctg
cggaccctgcgagctgtccgggtgctgcggcccctgaaactcgtgtcgggaatcccaagc
ctgcaggttgtcctcaagtccatcatgaaggccatggtgcccttgctgcagatcgggctg
ctcctcttcttcgccatcgtgatgtttgccatcatcgggctggagttctacatgggcaaa
ttccataaaacctgcttttccaatgagacaggtgaggaggtgggggattttccctgtgga
gaggagcctcctgccaggcagtgtgagagcggaaccacgtgcagggagtactggcagggc
cccaactacggcatcaccaactttgacaacatcctcttcgctgtgctcaccgtcttccag
tgcatcaccatggagggctggaccgacatcctctacaacacaaacgacgctgcaggaaat
acctggaattggctttacttcatccctctcatcatcattggctctttcttcatgctcaac
ttggtgctgggcgtcttatcaggtgaattcgccaaggagcgagagcgggtggagaaccgc
cgggcgttcctgaagctccgcaggcagcagcaaatcgagcgggagctcaacggctacctg
gagtggatcttcaaagcagaggaggtcatgctggccgaggaggacaagaacgccgaagag
aagtcccctctggacgggagggccgcctccgaagggccgattcctcaaggcacggcgccg
gcagagactggcagcggcagcagctacaacatgttgaaaagagccgcaataaagaagagc
aaaaatgacctgattcatgcagaagaaggtgaggaccatttcacagacatttgctccgtt
gggtctccctttgcccgtgccagtttgaagagtgggaagaacgagagctcgtcctacttc
aggaggaaagagaagatgttccgcttcttcatccgccgcatggtgaaggctcagagcttc
tactgggtcgtgctctgcgtggtggccctcaacaccctctgtgtggccatggtgcactat
gaccagcccgagaagctgaccactgctctctatttcgcggagtttgttttcctggggctg
ttcctcactgagatgtctttgaagatgtatgggctggggccaaggaattacttccactcc
tcgttcaactgctttgactttggggtcatcgtgggcagcatttttgaggtcatttgggct
gcggtgaagccgggaacctcctttggcatcagcgtgctgagagccctgcggctgctgagg
atcttcaaagtgacaaagtactggaattccctgaggaacctggtggtctccttgctgaac
tccatgaagtccatcatcagtttgcttttcctgctgttcctgttcatcgtggtctttgct
ctgctggggatgcagctctttggaggacagttcaatttccaagatgaaactccaaccacg
aatttcgataccttccctgctgccatcctcacagtcttccagatcctcaccggggaagac
tggaatgctgtgatgtaccacgggatagagtcgcagggcggcgtccactcgggaatgttc
tcctccatctacttcatcgtcctcaccctcttcggtaactataccctcctgaacgtcttc
ctggccatcgctgtggacaacctggccaacgcccaggagctgaccaaggacgaggaggag
atggaggaagccaccaaccagaagctggccctgcagaaggccaaggaagtggccgaagtg
agccccatgtcggccgccaacatctccatagctgccaagcagcagaattcctccaaatcc
aagtcggtttgggagcagaggacgagccagatccggatgcacaacttccgagccagctgc
gaggccctgtacaacgagctggaccccgaggagcgggtgcgctacgccaccaccctgcac
atccggcccgacatgaaaacccacctggaccggccgctggtcgtggagccccgcggcgaa
ggcaggaacaacatcaccaagctgagccccgtggacgtccaggaggtggtggagcacccc
aaacccacctctgccgacggggctgaagcgccgcggaagcaccaccggcatcgggagaag
gagaagctgggagagcaggagaagggagacgtgaccaaggacgagagcggcgaaaccggg
acgggcaacaaggaggagcggcacaggcagcaccggagccgcagcaaggaggtggaaggg
ggcagcaaggaagggaaaagcgaccgtaacagggggcaggaaggggggaagaggcaccac
cggcggggctcggtggaggaaggggccgagaaggagcaccgcaggcaccgcggccaccgg
cactcgtccgaccggccgggcaaggagggcaacggcacggccaacggcgcccgcggcgag
cggcgctcccggcaccgcggcggctcccgctccgggaacagggatggagagcccggggcc
aagggggacagcggagaggagccccaccggcggcaccggctcaggaacagggcgctgtcc
acctacgagtccgtggagaaggacagcggggacaaggacggggaggccggcgagaaggag
caccgcaatcaccagcccaaggagaaccagtgtgagctggaggccagcggcagtggcagt
ggccctgggagtgtccctgtgcacaccctgcccagcacctacctgcagaaggtgcccgag
cagcccgaggatgccgacaaccagaagaacgtgacgaggatgatccagccgcccctggac
aaaaccaccactgtgaacatccctgtcaccatcactgcccctccgggggagaccactgtc
attccaatgaacaacgtggagtttgaaagcaaaacggaggagaagaaagacgtcgatgac
ttgacgaaaaatgggcctaaaccaatcctgccttacagttccatgttcatcctcagtccc
acaaatccgatccggcgcctcttccactacatcgtcaacctgcgctacttcgagatggtg
atcctgatcgtcatcgccctcagcagcatcgccctggccgcagaggaccctgtccaagcc
gagtctcccaggaatgacgctctgaaatacctggattatatatttacaggagtcttcacc
tttgagatggtgatcaagatgattgacttggggctgctgctccacccgggctcctacttc
cgtgacctctggaatatcctggacttcattgtggtcagtggggccttggtggcttttgcc
ttctcaggaaccaaaggcaaggacatcaacaccatcaagtccctgcgagtcctgcgcgtg
ctcaggcctctgaagaccataaaacggctgccaaaactaaaggccgtctttgactgcgtg
gtgaactccctgaagaacgtcctcaacatcctcatcgtttacatgctcttcatgttcatc
ttcgccgtcatcgccgtgcagctcttcaagggccgcttcttctactgcacggacgagtcc
aaggagctggagaaggactgcaggggtcaatacctcgattatgaaaaaaacgaggtggag
gcacagcccagggaatggaaaaaatacgagttccactacgacaacgtgctctgggctctg
ctcacgctcttcaccgtgtccacaggggaagggtggccaactgtgctgaagcactcggtg
gatgccacctacgaggaacaggggcccagccctggctaccggatggaaatgtccatcttt
tacgtggtctattttgttgtcttcccttttttctttgtcaacatctttgtggcgttaatc
atcatcaccttccaggagcaaggagataaagtgatgtcagagtgcagcctcgagaaaaac
gagagggcctgcatagactttgccataagtgccaagcccctgacccgctacatgcctcag
aacaagcaatccttccagtacaagatgtggaaattcgtggtgtcccctccctttgagtat
tttatcatggtcatgattgctctcaacaccatcgtcctcatgatgaagttctacgacgct
ccagaagcatacgaagaaatgctcaaatgcctgaatattgtgtttacatccatgttttcc
atggaatgtgtgctgaagatcattgcctttggtgtgctgaattatttccgagatgcctgg
aatgtctttgattttgtaacagtgttgggaagtattactgatattttagtaacagagatt
gcggacaacttcatcaacctcagcttcctgcggctcttccgggcagccaggctcatcaag
ctcctccgccagggctacaccatccgcatcctgctctggacattcgtgcagtccttcaag
gccttgccttatgtgtgtctcctcattgcaatgctcttcttcatctatgccattattggc
atgcaggtatttgggaacattgccttagatgatgaaacctccatcaatcggcacaacaac
ttccggactttcctccaagccctgatgctcctgttcaggagcgctacgggggaagcctgg
cacgagatcatgttgtcctgcttgagcaacagagcctgtgaccccctctctggcctcacc
aaaaaggagtgtggcagtgattttgcctatttctacttcgtgtcgttcattttcctctgc
tccttcctgatgctgaacctgtttgtggctgtgatcatggacaatttcgagtacctgacc
cgggactcctccatcctcgggccgcatcacctggacgagtttgtccgggtgtgggctgag
tacgaccccgcagcctgcgggcgcatcagttacacagacatgtatgagatgctgagacac
atgtccccacctctaggccttgggaagaaatgcccagctcgtgttgcctataagcgcctg
gtgaggatgaacatgcccatctcccccgaggatttaaccgtgcacttcacctccacgctg
atggccctgatccgcacggccctggagatcaaactggcctcaggcggtgtgaagcagcac
cagtgcgacgctgagctcaggaaggagatctcgctggtctggcccaacctgtcccagaag
actctggatctgctggtgcctcctcacaaacctgatgaaatgacggtggggaaggtctac
gcggccctgatgatatttgacttctacaagcagaataagaacagcagggagcaagtccag
ccccccgggggcctgtgccagcctggtccagtgtccctcttccaccccttgaaggccacc
ctggagcagacccagcccacgaccttcagcaacgccaaggccttcctgcgccagaagagc
tcggcctccctcaacaacgggggagccttgccccccccggagggagggatcaaagagtcc
agctcttgggggacccagcgcacccaggacgtgttctatgaaaccaggagcccagctttt
gagcgaggccactccgaggagatccccattgagagggtggtagaaatgaaggagatcagc
cccacagttgccaacggagagccccaaccaggcctggagagccagggccgggcggcctcc
atgccacgcctggctgctgaaacccagaggagcaaagcacggtcacctgggagttacctg
gcacccatcccggacacgagccccatgaagcgctcggtctccacgctgaccccgcagcgc
cctcacgccatgcacctctacgagtattccttggagcggatgcctccggagcagggccac
caccaccaccaccaccgctgccaccggcggaaagagaagaagcagaagtccttggataga
gccgcccatcacctggctgatggacaagctgttgcccagtctggagagtcttcttccagg
gacaagaagcaggagcgtggccgctcccaggagaggaagcagcactcctcctcctcctcc
gaaaagcagcgcttctactcctgcgaccgctacggcagccgggaccgtgcccagcccaaa
tctgccgaccagagcagacccacctcccccaacgggggcccagagcacggcccacacaga
cagggcagtggttcagttaatgggagccccttgctgtcgacatctggtgctagtaccccc
tgccggggtcggaggcagctcccacagactccactgaccccacgccccagcatcacttac
aagaccgctaactcctcgcccgtgcacttcaccactttccaaacccccaccttctccccg
ggccgcctgagccgcgggctgtccgagcacaacgcgctgctgcggggggagcagcagctg
cccccgcccgccgtgtcccgcatcggctccgacccctacctgggccaccgcgacgccgcc
gacagcccgcagcgcgccgcgcccgaggacacgctcaccttcgaggaggccgtggccacc
aactcgggccgctcctcaaggacttcctacgtctcctccctgacctcgcagtcgcaccaa
atccgccgggtgcccaacgggtaccactacacgctggggctcaacacgggccccggtgcc
agaggacgcagttactaccacgaagccgatgaggatgactggtgctag
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