Hirundo rustica (Barn swallow): 120761955
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Entry
120761955 CDS
T09369
Symbol
AFF2
Name
(RefSeq) AF4/FMR2 family member 2 isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrt03021
]
120761955 (AFF2)
Transcription machinery [BR:
hrt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120761955 (AFF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
120761955
NCBI-ProteinID:
XP_039939689
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All DBs
Position
21:6235730..6588380
Genome browser
AA seq
1284 aa
AA seq
DB search
MDLFDFFRDWDLEQQCHYEQDRSALKRKEWERRNQEVQQDEDLFASGFNLFGEPYKTNKG
DALANRVQNTLGNYDEMKDLLTNHSNQSHLVGIPKNSVPQTPIEKNEQSFFPEPRNRMIP
SHQISGNSSTSMPPPSSLSSNPTLLHGHQSSRKSRTDWSRSGHNSSGAQPSQSSGQQSRT
KHSSSHDQSQGRYEDLYNCQSEQHKSGGTEEANAMAASSHSRRHAHAKPAPGEHAYKENS
HSKSPTEPEFVGHGPGSPLPSTSLLTANNGLSTQNFPPGLHCKNSMVQQKPTAYVRPMDG
QDQVPNDSPELKPPVEIESGYGNQSFGTLLEGKVNTPSSKNKVPKLNIPPVSEVALPNDS
SCVEEILREMTHSWPPPLTAIHTPGKAEQTKFSIPSKDSQHLTSGYNVQKWSDPAGKVAT
KSVPQKSMLEDDLKLSSDEDDSEQAAEKTKLRNIPVNSLPVPVAHPAGLAHSSGGSGSSS
ESESSSESDSDSESSSSDSECNEESRSATPEPEPPSTNKWQLDKWLNKVNPHNKTIINNQ
NEPHSESSSQAQGSQQAEGPNKGKLNSSLPPTDSKDRAILSPIREKAKPRVAQKTPEAKS
SKQKSPAHNEPTSQRTTGKKQPKKVERTSSVEEYNWPKPNNTSNTPKEKDTQEPPEQPKV
RTKAAVGKTAPRKEPRTSTGLTSEKKKYRGPSKIVPKSREFIETDSSTSDSNTDQEESLQ
AKVLPACTGSGTGVKVKDSGSNILSVSSLTSNGSNTSIDQTSNDLEEQLFSPIPIVQNEL
LSPLREYEELKSLWVKIDLSLLSRIPGQETFETTSVKSEPREANVKHRRPSRESPTPAAE
KPSTKSKRKHKQTESLDTFVESKKQRLEEPPASCLLPPCISPIPNHRITSTKESSSGSVK
KVTKKREEKLFPPPLSPLLDDPVHRRHGSDSSAFSQEPAVTSTSQSSSSSSSASKHRKNE
SKSSSNPKGICEEESHGTPTANALLDTSHLEPDIWSAMPMLSNGNSEPRRPKITFDDVLH
NADYYMQEAKKLKHKADALLEKFGKAVNYADAALSFIECGNAMERDPLEAKSPYTMYSET
VELIRYAMRLKNFTGSSATEGDKKLAVLCYRCLSLLYLRMFKLKKDHAMKYSRSLMEYFK
GFTRCYTDVKGRMSKQNSSKASQAPSPWGGNGKSTETPSPMSLSPSPVSSAGSSAGAAGS
SSAGTITIPQRIHHMAASHVNITNNVLRSYEHWDMADKLAKENKEFFVDLDSVMGPLTQH
SSMTNLVRYVRQGLHWLRIEAHLL
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggacctattcgactttttcagggactgggacttagagcagcagtgtcactatgagcaa
gaccggagtgcacttaagaggaaggaatgggagagaagaaaccaggaggtccagcaggat
gaagatctctttgcttcaggttttaacctctttggggaaccctacaagacaaataaaggc
gacgcccttgcaaaccgtgtccagaacacattgggaaattatgatgagatgaaggatctg
ttaaccaaccactccaaccagagccaccttgtaggaatcccaaagaattctgtcccacag
acacccattgaaaaaaatgagcagagctttttcccagaaccgaggaacaggatgatccca
tctcatcagatcagcggcaactcatcaacatcgatgcctcctccttcttcattgtcatcc
aatcctactttgctgcacggccaccagagcagcaggaagtcaaggacagactggtcacgc
agtggtcacaactccagtggggcccagccaagccaatccagtggtcagcagagtcggaca
aagcacagctcttctcatgaccagtcccagggcaggtatgaagatctctataactgccag
agcgagcagcataaaagtgggggaactgaggaggcaaacgctatggcagcatcttctcat
tcgaggaggcacgctcacgcaaagccagcgcccggagagcacgcttacaaagagaacagt
cactcgaagtcacccacagagcctgagttcgtgggccatggtcctggatctccgcttcct
tccacttctttgttaactgcgaacaatggtctctcgactcagaatttcccaccaggactc
cactgtaaaaacagcatggtccagcaaaagcctacggcttatgtcaggcccatggacggc
caggaccaggtacccaatgactcacctgaactgaaacccccggtagaaattgagagtgga
tatggaaatcagtcctttggaacgctgctggaaggaaaagtgaacacgcctagttcgaag
aacaaagtaccaaagctcaacattcctcctgttagtgaagttgcccttccaaatgactcc
agctgtgtggaagaaatactgagggagatgacccattcctggcctcctcctcttactgct
attcacactcctggcaaggctgagcagaccaagttttctatcccaagcaaggactcccaa
catctgacctcaggatacaatgtacaaaagtggagtgatccagcagggaaagttgcaact
aagtcagtgccacaaaagtcaatgcttgaggatgacctgaaactcagcagtgatgaagat
gacagtgaacaggctgccgaaaagacaaaattgagaaacattcctgtaaacagcctgccg
gtgccggtggcacaccccgcgggcttggcccactccagcggcggctccggcagctccagc
gagtccgagagcagctccgagtccgactccgacagcgagagcagctccagcgacagcgag
tgcaacgaggagtcccgcagtgccacgccagagcccgaacccccctcaacaaacaaatgg
cagctggacaagtggctaaataaggtgaacccccacaacaagaccatcatcaacaatcaa
aatgagcctcacagcgagagcagctcccaggcccagggcagccagcaggccgaagggcca
aacaaagggaagctcaacagcagcctgcccccgaccgattccaaagaccgggcgatcctt
agtcccatccgagagaaagccaaaccacgggttgcccagaaaaccccagaggcaaagagc
tccaagcagaagtcgccagctcataatgagccaacttcacaaaggactactgggaaaaaa
caacccaaaaaggtagaaaggacttccagtgtagaagagtataactggcccaaaccaaat
aataccagcaacactcccaaagaaaaagacacacaggaaccccccgagcagccaaaggtg
cgaactaaagcagcagttgggaagacagctccaaggaaagaaccacgaactagcacaggt
ctcacttcagagaagaaaaagtacagaggccccagcaaaattgtcccgaagtcccgggag
ttcattgaaacggattcatctacttctgactccaacacagaccaggaggagagcttgcag
gccaaggtgctgccagcctgcactgggtctggcactggtgtcaaggtgaaggactctggc
agtaacatcctcagcgtaagtagcctaaccagcaatggcagcaacacttccattgaccag
accagcaatgacctggaggagcagctcttttctcctatcccaatcgtacaaaatgaactt
ctgtccccgctgagagaatatgaagagctcaaatctctgtgggtgaaaatagaccttagt
ttactctctaggatacctggacaggaaactttcgagaccacctctgtgaaaagcgaaccc
agagaggcaaatgtgaaacacaggcgaccatctcgagagtcccctaccccagcagctgaa
aaaccctccacaaaatccaaaaggaaacacaagcagacagaaagcctggatacctttgtt
gaaagcaagaagcagcgcctggaggagcctccagcttcctgtctgctcccaccttgtatc
tctccaataccgaaccacagaataaccagcactaaagagagcagcagtggctcggtgaag
aaggtgacaaagaaaagagaagagaagctgttccctcctcccttgtccccgctcttggac
gaccccgtgcaccggcggcacggcagcgacagcagcgccttcagccaggagcccgctgtc
accagcacctcacagagcagcagctcgtcctcctctgcctctaaacacagaaagaatgaa
agtaaatcttcttctaaccccaaaggaatctgtgaggaagaatctcacggtacacccaca
gccaacgctcttcttgacaccagccatctagagccagacatctggtctgcaatgccaatg
ctttccaacgggaattctgagcccaggagacccaaaataacgtttgatgatgtgcttcac
aatgcggattattacatgcaagaggctaagaagctgaagcacaaagcagatgcactgctg
gagaagttcggcaaagcagtgaattacgctgatgctgccctctccttcatcgagtgcggg
aacgccatggagcgagatccattagaagctaaatctccatacaccatgtactcagagact
gtggaactcatcaggtatgcaatgagactcaagaatttcacaggctcttctgccacagaa
ggggacaagaaattagcagttttatgctaccgatgcttatcacttctctacttgagaatg
tttaaactaaagaaggaccacgctatgaagtactccagatctctgatggaatattttaag
ggttttacaaggtgctacacagacgtgaaaggcagaatgagtaagcagaactcttcaaaa
gcctcacaggccccctcaccttggggcggcaatggaaagagcacagaaaccccctcgccc
atgtccctgagcccgtcccctgtcagctctgctgggagcagcgcgggcgccgccggctcg
tcctcggcggggaccatcaccatcccccagcgcatccaccacatggctgccagccacgtc
aacatcaccaacaacgtcctgcgcagctacgagcactgggacatggctgacaagctggcc
aaggagaacaaagagttctttgtagacctggactcagtgatgggacccctaacacaacac
agcagtatgaccaatctggttcgttacgttcgccagggactccactggctccgcatcgag
gctcatttgttgtag
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