Hirundo rustica (Barn swallow): 120761995
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Entry
120761995 CDS
T09369
Name
(RefSeq) nuclear pore glycoprotein p62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120761995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120761995
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120761995
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DUF4164
Nup188_C
Motif
Other DBs
NCBI-GeneID:
120761995
NCBI-ProteinID:
XP_039939837
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Position
21:complement(3757248..3763907)
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AA seq
578 aa
AA seq
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MNQFSFGAAAPGGAFSLGAPRAATTTAPSGGFSFSAPASTSGGFSFGGAAPAAGGGQPAG
LFSFSRPGAAAQPSGFSFGSGSAAAAPAAPAAAAFPLGANTPKVNFGASTATATPGITAG
FSFGTPAATSTPSSQAAAPSGFAFGSAGTSSTSTAPAGTTGGFTFSSGTTTQAGAAGFGV
GTAAPQATSAGLTFGTAPAAAATTSTATLGAAAPSAAPFSLGGQPTGVTFGQLPSTAAAS
TSTATLTTSTSQAPTLSFGTKLGATSTAASTASTSSSTSVLGSTGPSLFASVATSSAPAS
SSSTGLSLGATSTASTGTAGLGTLGFGLKVPGTTAATTSTATGTTSASGFPLSLKPLTTT
GAIGAVTSTAAITTTTTPSAPPVMTYAQLESLINKWSLELEDQEKHFLHQATQVNAWDRM
LIENGEKITSLHREVEKVKVDQKRLDQELDFILSQQKELEDLLTPLEESVKEQSGTIYLQ
HADEERERTYKLAENVDAQLKRMAQDLKDIIDHLNTSGGPADTSDPLQQICKILNAHMDS
LQWIDQNSAVLQRKVEEVTKVCESRRKEQERSFRITFD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagttcagcttcggggcggccgcgcccggcggcgccttcagcctgggcgcgccc
cgagccgccaccaccacggcgcccagcggcggcttctccttctccgcgcccgcctccacc
tcgggcggcttcagcttcggcggcgcggcgccggcggcgggcggcggccagcccgccggg
ctcttctccttcagcaggccgggcgcggccgcgcagccctccggcttcagcttcggctcc
ggctcggccgccgccgcccccgccgccccggcggccgccgccttcccgctgggggccaac
acaccaaaagtgaactttggagccagcactgccactgcaactcctggaatcacggcgggc
ttttcttttggtacccctgcggcaaccagcactccctcgagtcaggcagcagccccgtct
ggctttgcctttggctctgctggcaccagcagcaccagcacggccccggctgggacaaca
ggaggcttcaccttctccagtggcaccacgactcaggcgggagcagccgggttcggcgtc
ggcaccgcggctccgcaggcaacgtccgcagggctgacctttggcacggcccctgcggct
gctgccaccaccagcacggccaccctgggagctgccgccccgtcagcagcgcccttcagc
cttgggggacagcccacaggtgtaacctttgggcagctgccttcaacagcagccgccagt
acaagcacggcaacgctgaccacaagtaccagccaggcgcccaccctgtcctttggaacc
aagcttggagccacatccacagctgccagcacagcctccaccagcagcagcacctcagtg
ctgggctccacggggccctcgttgtttgcatctgtggcaacttcttcagccccagcctcc
tccagcagcacaggcctctcactgggtgccacttccactgcttccactgggacagccggt
ctggggacccttggctttggattaaaagttcctggaacaacagctgccaccacaagcact
gccacagggactacttctgcttctggctttcctttgagtctgaagcctttgactaccact
ggtgccattggagctgtgacctccacagctgccatcaccacaaccaccacacccagtgcc
cccccagtgatgacttatgcccagctggagagtttgataaacaagtggagcctggaactg
gaggaccaagagaagcacttcctccatcaagctacacaagtcaatgcctgggaccggatg
ctgatagagaatggggagaagattacttcgttacacagagaagtagagaaggtgaaggtt
gatcagaagagactggatcaggagctggacttcattctgtcccagcagaaggagctggag
gacttgctgacccctctggaggagtctgtgaaggagcagagcgggaccatctacctgcag
cacgccgatgaggaacgggagaggacctacaaactggctgaaaacgttgatgcacagctg
aagcgcatggcacaagatctgaaggacatcattgatcatttgaacacgtcaggaggccca
gcagacacgagtgacccgcttcagcagatctgtaaaattttgaatgcacacatggattcc
ctgcagtggattgaccagaactcagctgtgctgcagagaaaggtggaggaggtgacaaaa
gtttgtgagagtcgccgcaaggagcaggagcgcagctttcgcatcacctttgactga
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