Hirundo rustica (Barn swallow): 120762010
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Entry
120762010 CDS
T09369
Symbol
FMR1
Name
(RefSeq) fragile X messenger ribonucleoprotein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120762010 (FMR1)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120762010 (FMR1)
Factors involved in mRNA localization
Other mRNA localization factors
120762010 (FMR1)
mRNA cycle factors
Stress granule specific factors
120762010 (FMR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
FXMR_C2
Tudor_FRX1
KH_1
Agenet
KH-I_KHDC4-BBP
KH_2
pAdhesive_11
KIF2A-like_1st
Motif
Other DBs
NCBI-GeneID:
120762010
NCBI-ProteinID:
XP_039939874
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All DBs
Position
21:6112142..6141982
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AA seq
565 aa
AA seq
DB search
MEELVVEVRGSNGAFYKAFVKDVHEDSITVSFENNWQPERQIPFHDVRFPPPAGYNKDIN
ESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKP
ATKDTFHKIKLAVPEDLRQMCAKESAHKDFKKAVGAFSVTYDSENHQLIILSINDVTTKR
ANMLIDMHFRSLRTKLSLILRNEEASKQLESSRQLASRFHEQFVVREDLMGLAIGTHGAN
IQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSYLEFAEDVIQVPRNLVGKVIGKN
GKLIQEIVDKSGVVRVRIEAENDKNIPQEEGMVPFVFVGTKDSITNATVLLDYHLNYLKE
VDQLRLERLQIDEQLRQIGATSRPPPNRTDKDKGYMTDDGPGLGRGSRPYRNRGHSRRGP
GYASGTNSEASNASETESDHRDELSDWSAAPAEEERDNYLRRGDGRRRGGSTRGQGGRGR
GGFKGNDEQSRTDNRQRNSREAKGRTADGSLEIRIDCNNERSVHTKTLQNTSSEGSRLRA
GKERNPKKEKTDGADAQQPLVNGVP
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggtggtggaggtgcggggctccaacggggccttctacaaggcatttgta
aaggatgtgcatgaagattcaataacagtttcatttgaaaacaactggcaaccagagaga
caaatcccattccatgatgtgaggttcccaccacctgcaggctataataaagacatcaat
gaaagtgatgaagtagaggtttattccagggcaaatgaaaaagaaccctgctgttggtgg
ttggctaaagtgagaatgataaagggtgagttctacgtaatagaatatgcagcctgtgat
gctacatacaacgaaatcgtcacaattgagcgtttgagatctgtgaaccccaataaaccc
gcaacaaaagatacttttcacaaaatcaaactggcagttcctgaagatttaaggcaaatg
tgtgccaaagaatctgcacataaggacttcaaaaaggcagttggagctttttctgtaaca
tatgattctgaaaaccaccagcttattattttgtcaatcaacgatgtaaccacaaagcgg
gccaacatgctgattgacatgcactttcggagtcttcgcaccaagttatccctgatcctg
aggaatgaagaagccagcaaacagctggagagttctaggcaacttgcatcacggttccat
gaacagtttgtagtacgtgaagacctaatgggtttggccattggcactcatggtgccaat
attcagcaagccaggaaagtccctggagtgactgccattgatcttgatgaagatacttgt
acattccatatttatggagaggatcaagatgcggtgaaaaaggcaagaagttaccttgaa
tttgctgaagatgtcatccaagtcccaaggaatttagtaggaaaagtaataggaaaaaat
ggaaaactgattcaggagatagtggacaaatctggcgttgtaagagtgagaattgaggct
gaaaatgataaaaatattccacaagaagagggcatggtaccatttgtgtttgtaggaacc
aaggatagcatcactaatgcaactgttcttctggattatcatcttaattatttaaaggaa
gtggaccagctgcgtttggaaagattgcagattgatgagcaactgcgacagatcggagct
acttccaggccccccccgaaccgtacggacaaggacaaggggtacatgacggacgatggg
ccgggcctgggccgcggcagccgcccctaccggaaccgcgggcacagccggcgcgggcca
ggctatgcctcaggaactaattctgaagcatcaaatgcttctgaaacagagtctgatcac
agagacgagctgagcgattggtccgcggcgccggcggaggaggagcgggacaattacctg
cgcaggggggacgggcggcggcgcggcggcagcacccggggacaaggcgggaggggccgc
ggaggattcaaaggcaatgacgaacagtcgcgaacagataaccgtcagcgtaactcgaga
gaggcgaaggggaggacagcagacgggtctcttgagatcaggattgactgcaataatgaa
aggagtgtccacactaaaaccttacagaatacctcgagcgaaggcagccggctgcgcgcg
ggcaaggagcggaacccgaagaaggagaagacggacggcgcggacgctcaacagcccctg
gtgaacggagtcccctaa
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