Hirundo rustica (Barn swallow): 120762023
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Entry
120762023 CDS
T09369
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-3-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04080
Neuroactive ligand-receptor interaction
hrt04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120762023
04082 Neuroactive ligand signaling
120762023
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hrt04040
]
120762023
Ion channels [BR:
hrt04040
]
Ligand-gated channels
GABA-A
120762023
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
DUF4985
Motif
Other DBs
NCBI-GeneID:
120762023
NCBI-ProteinID:
XP_039939923
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Position
21:3490872..3566701
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AA seq
471 aa
AA seq
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MALPGMGPFSLLSLGVLVLALALPADAGLSQKHVSDVVDDSKDNITIFTRILDRLLDGYD
NRLRPGLGDSVTEVKTDIYVTSFGPVSDTDMEYTIDVFFRQSWRDERLKFDGPMKILPLN
NLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLEDFP
MDVHACPLKFGSYAYTKTEVIYTWTLGKDKSVEVAKGGSRLNQYDLLGHVVGTEMVRSST
GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT
TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKKVLEAQE
MKKKEPVALAKKTNNTYNIVGTTYALNMAKEPGLPTISKSAAVTATAASVPPKMPRLEEK
LPESKKTYNSVSKVDKMSRIVFPVLFAIFNLVYWATYVNRESAIKGMIPKQ
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcactcccgggaatggggcccttctccctcctcagccttggagtcctggtcctggct
ctggctctccctgctgatgctgggctctctcagaagcacgtctcggacgtcgtggatgac
agcaaagacaacatcaccattttcacgcgcatcctggacaggctcctggacggatacgac
aaccgcctgcggcccgggctgggagacagtgtaactgaagtcaagacagacatttacgtg
acgagtttcggccctgtctcggacacagacatggaatacaccatcgatgtctttttccgg
cagtcctggagagacgaaaggctgaagtttgacggccccatgaaaatccttcccctgaac
aacctgctggccagtaagatctggactcctgacactttcttccacaacgggaagaaatct
gttgcccacaacatgacgacccccaacaagctgctgcgcctggtggacaacggcaccctc
ctgtacaccatgaggctgaccatccacgccgagtgccccatgcacctggaggacttccca
atggacgtgcacgcctgccccctgaaatttgggagctatgcctacacaaagacggaggtg
atctacacctggaccctggggaaggataaatctgtggaagtggccaagggtggatcccgc
ctgaaccagtatgacctgctgggccatgtggttgggacggagatggttcgatccagcaca
ggggaatacgtcgtcatgaccacgcacttccacctcaagaggaagatcgggtactttgtg
atccagacctacctgccctgcatcatgactgtcatcctgtcccaggtctccttctggctc
aacagggagtccgtccctgcccgcacggtttttggtgtcaccacggtgctcaccatgacc
acactaagcatcagcgccagaaactcgttacccaaagtggcgtacgcgacggccatggac
tggttcatagccgtctgttatgcctttgtgttttctgcgctgatcgagttcgccaccgtc
aactacttcaccaagcgcagctgggcctgggacggcaagaaggtgctggaggcccaggag
atgaagaaaaaggagccggtggcgctggccaagaaaaccaacaacacctacaacatcgtc
ggcaccacctacgccctgaacatggccaaggagcccggcctgcccaccatctccaagagc
gctgccgtcactgccaccgccgccagcgtgccccccaagatgccccgcctggaggagaag
ctccccgagagcaagaagacctacaacagcgtcagcaaggtagacaagatgtcccgcatc
gtcttcccagtcctctttgccattttcaacttggtctactgggccacctatgtgaaccgg
gagtcagctatcaagggaatgatccccaaacaatag
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