Hirundo rustica (Barn swallow): 120762034
Help
Entry
120762034 CDS
T09369
Symbol
RPGRIP1L
Name
(RefSeq) protein fantom isoform X1
KO
K16550
protein fantom
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hrt01009
]
120762034 (RPGRIP1L)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hrt03037
]
120762034 (RPGRIP1L)
Protein phosphatases and associated proteins [BR:
hrt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120762034 (RPGRIP1L)
Cilium and associated proteins [BR:
hrt03037
]
Primary cilia and associated proteins
MKS complex
120762034 (RPGRIP1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-C2_1
RPGR1_C
Motif
Other DBs
NCBI-GeneID:
120762034
NCBI-ProteinID:
XP_039939945
LinkDB
All DBs
Position
21:73707..118310
Genome browser
AA seq
1063 aa
AA seq
DB search
MPVSADETVGNLAGRNTVLTPAETEGLQESSSTQNVKARQVISRISREELEDRFLHLRDD
HILLKQYANKQEDKIKRMTTKLIRLVNDKRKCDQDGCGPKQLGQALELEEMIEHLRERVR
ELEKQNESLRNKLISTKQQLQIQGHRPCLYNSIQSRVNTGLKKESEAAGMPEHTKKGMRC
QCLEVRSSDLVLPKYGQGLLEDSRAEIRNLETVIESQRKQIEELDRAKEILGSQLRRKEK
EIEESTLRLKEQGTASQRLNIQDNVEMIKVRKQLAEKSNALSAMEGKFLQLQENLKNLKT
NHDALLAKGDELNVQLKEERLKSFHLQKELQSVTVSNRRTEELQERINDLEKENELLKEN
YDKLQSSVFSLPLEQQWKSKEQQLKLQIAKLETAIKTDLADKNEILDKIKVERDQKEKLM
QDNKDLQLRYLEQKEQLEDLKNQVKFLTKFQEGDLGVAELNETLIKDRKQQKNMDLLFLE
KVEDDIHKDLQHSMQELQLTHAETVQELEKTRNLLLVQHKISKDYQTEVETMTRKMESLQ
KDCELKLEQYSHLLDIRAARIRKLEAQLKDIVYDTKPLKSRSEVLPCDPVGGFVETVHLE
RGENLFEIHISKVIFSSEAMHAFGDWEPATFCTYAFYDFELQITPVVHGNAPSYDFTSQF
LLQSDDSFFHYIQENSITLEVHRAYGIDYETIASCQLKFHEILENNGKIYNTANLVGKTG
HIQNYGTVEYWIRLQVPMDQAIIPYKQRSKALGYITSSFREHEQPSKTPTLKMKQRAAQA
HKRVSFLDLSTIQMAHGVQEAKQLAGDKVKEMAEEIQQEKEELSRLSEKQLADQTLITSR
DETEIIEELEPEDQEDHQEDDAVESIKTDSDDCIISSPVSTNIKQLSQSIRGNYLEVEKI
RIKITSLSLTESRITADETIQQLFVECRLNGFLAEETPLSLPKPTGGQRIHYNYSTVINV
DKEDNHAEREYLKSILLKPDLPADSLKFTVVSDPPEDEQDLECEDIGFAYVSLKEIFQKQ
RDIIEQDIDVFDSQDASTVIGKLTVTVEALNALRSVHEECEND
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtttctgctgatgaaactgtggggaacctggctgggagaaatacagtcctaact
ccagctgaaacggaaggattacaagaatcatcatctacacagaatgtaaaagctcgacaa
gtcatatcacgaatcagtcgagaggaactggaagatagatttcttcatctacgtgatgac
cacatcctactcaaacagtatgcaaataagcaagaggataaaattaaaagaatgaccacc
aagttaatacggcttgttaatgataaaagaaaatgtgaccaagatggctgtggacccaag
cagctgggtcaggctctggagctggaagaaatgattgagcatttgcgagaaagagttcgt
gagcttgagaaacaaaatgagagcctccgcaacaaactcatttcaactaaacagcagctc
cagattcaaggccataggccttgtctgtacaactccattcaatctcgtgtgaacactggt
ctcaaaaaagagagtgaggctgctggcatgccagaacacaccaagaagggaatgagatgt
cagtgtttagaagtgagatcatctgaccttgtgcttcccaaatatggacagggtctgctc
gaggattcaagggctgaaatcagaaatttggagactgttattgagtcccaaaggaaacaa
attgaggaactagaccgtgctaaagagattcttgggagtcagttaagaaggaaagagaag
gaaattgaagaatccaccctacggctgaaagagcagggtacagcaagccaaaggctaaac
attcaggacaatgtggaaatgatcaaagtccgtaaacagctggctgagaaaagcaatgct
ctttcagcaatggaaggaaaatttctccagcttcaagagaacctaaagaacttgaagacc
aaccatgatgctttattagcaaaaggtgatgaactgaatgttcagcttaaagaggagcgg
ttaaagtccttccatcttcaaaaggaattgcagtcagtgactgtttcaaacagaaggaca
gaagagttacaggaaagaataaatgatctagaaaaagagaatgaactcttgaaggaaaac
tatgataagctgcaaagcagtgtcttcagtctgccccttgaacagcaatggaaatcaaag
gaacagcaactgaaactgcaaattgctaaactagagacagctatcaaaactgatttagca
gacaaaaatgaaatccttgacaagatcaaagtagaaagagaccaaaaggaaaaactaatg
caggacaacaaagacttgcagttacgctacctggaacaaaaggagcaactagaagatctg
aaaaatcaagtgaagtttttgaccaagtttcaggaaggtgatcttggtgtggcagaactt
aatgaaaccctcataaaggatcgaaagcagcaaaagaatatggaccttctgttcttagaa
aaagtggaagatgatatccataaagatttacaacactccatgcaggagctgcagttaaca
catgcggaaacagtgcaagaacttgaaaagacaaggaatttgttacttgtgcagcacaaa
attagcaaagattaccagactgaagtagaaacaatgacaagaaagatggaaagtctacag
aaagactgtgagttaaaactggaacaatatagccatcttctcgatattagagctgcacgt
atcagaaaactagaagcccaactaaaagacattgtctatgatacaaaaccacttaagtcc
agatcagaagtattgccatgtgatccagtgggtggatttgttgaaactgttcatttagaa
agaggagagaacctgtttgaaattcatatcagcaaagtgatcttctcttctgaagctatg
cacgctttcggtgactgggaacctgcgaccttttgtacttacgcattttatgactttgaa
cttcagataaccccagtagttcatgggaacgccccatcatatgacttcacttctcagttt
cttctgcagtctgatgacagcttctttcactacatacaggaaaacagcatcacacttgag
gttcatcgtgcgtacggcatagattatgaaacaattgcttcttgtcagcttaagttccat
gaaatcttggaaaacaacggcaagatctacaacacagcaaatttagttggaaaaacagga
cacattcaaaattatggtactgtagaatactggatcaggttacaagttcctatggaccaa
gcaattattccctacaaacagaggtcaaaggctctgggatatataacatccagttttagg
gaacatgaacaaccatccaagacaccaacactcaaaatgaagcagcgtgcagctcaagca
cacaagagagtctcttttctggatcttagtacaatacagatggcacatggggtacaggag
gctaaacagctggcaggtgacaaagtgaaggagatggctgaagaaattcagcaggaaaaa
gaagagctctctcgtctgtctgagaagcagttggctgaccaaacattgattacttctaga
gatgagacagaaataattgaagaattggagccagaagatcaagaagatcatcaagaggat
gatgctgttgaatcaataaaaaccgacagtgatgactgtattatttcaagtccagtatcc
acaaatattaaacagctgagtcagagtatacgtggcaattatttggaagttgaaaaaatc
cggattaaaattacatcactcagtcttactgagtcacgaattacagcagacgaaacaata
cagcagctgtttgtagaatgcagattaaacggtttccttgcagaggagaccccactgtca
cttccaaaaccaacaggtggtcagcggattcactataactatagcactgtgataaatgtg
gataaggaagataatcatgcagagagagagtatctcaagtcaattcttctaaagccagat
ctgcctgctgacagcctaaaatttacagtggtcagtgatcccccagaagatgaacaggat
cttgaatgtgaggatattgggtttgcttatgtcagtttaaaagagatattccagaagcaa
agagatatcattgagcaagatattgatgttttcgattcacaagatgccagtacagtaatt
ggaaagctcacagtgacagtggaagccctcaatgcactgcgttcagtccatgaggaatgc
gaaaatgattag
DBGET
integrated database retrieval system
