Hirundo rustica (Barn swallow): 120762055
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Entry
120762055 CDS
T09369
Symbol
RLIM
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrt04121
]
120762055 (RLIM)
Enzymes [BR:
hrt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120762055 (RLIM)
Ubiquitin system [BR:
hrt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120762055 (RLIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING-like
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
120762055
NCBI-ProteinID:
XP_039939992
LinkDB
All DBs
Position
21:complement(2114185..2127375)
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AA seq
595 aa
AA seq
DB search
MESSDSSDKGSIDQSEAQRQSQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEIT
EEELLRRLHQVKEGPPQQNSDENRGAESAEDVSNGDSIIDWLNSVRQTGNTTRSGQRGNQ
SWRAVSRTNPNSGDFRFSLEINVNRNNGNTNPETENEPSVEPSNGEDLENSQSDSEIPRS
ESPSVRQPGSERSSAEELTAEEASPPRGQRRARSRSPEQRRTRARTDRSRSPINAVSEAP
RRSHHNTSSQTLDQSSASEAEGSSRTRQHVTLRQHTVGTEVPSENAVLFSPAETRPAPQA
AGSSESTGASESTAPGQRPPTIVLDLQVRRVRPGEYRQRDSIANRTRSRSQTPNNTVTYE
SERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELS
YFMYSDSDADPGAPAPSQNAESSEPQSGGGGTSGGENADVSSGEVYEGGHEASSTSGARR
EGRNMRGSVTFEESSSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLAMRNFGESDALKT
CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRESVV
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggaaagctcagattctagtgataaaggaagtattgatcagtcagaagcccaacgtcag
agccagctggatcggttagatcgagaagaagctttttatcagtttgtgaacaacctgagt
gaggaggactacaggcttatgagagataacaatttgctaggaacaccaggtgaaattact
gaagaagagttgctgagaaggctacaccaagttaaagaaggtccgccacagcaaaacagt
gatgagaatagaggtgcagagtccgcagaagatgtttcaaatggagattctataatagac
tggcttaattcagtccgacagacgggaaatacgacacgaagtgggcagcgaggaaaccag
tcctggagagcagtgagccggactaacccgaatagcggagacttcagattcagtttggaa
ataaatgtcaaccgtaataatgggaacacgaatccagaaactgagaatgagccatctgta
gagccttccaatggggaggatttggaaaacagccaaagtgactctgaaattccaaggtct
gaatcaccatctgtaaggcagcctggatcagaaaggagcagtgcggaggagctgacggct
gaggaggcttcccctcctagagggcagaggagagccaggagcaggagtccagagcagcgg
cggacgcgggctaggactgatagaagtaggtcacctattaatgcagtgagtgaggcccct
cgtaggtctcatcacaacacatcatctcaaacacttgaccagtcctcagcgagcgaggct
gagggcagctctagaaccaggcagcacgtgacgttaaggcagcacacggtggggactgag
gtgccaagtgaaaatgcagttctgttttcccccgctgaaacgaggcccgctcctcaagcg
gcaggttcttcggaaagcactggcgccagcgagtccacggctcctgggcagaggcctccc
accatagtgcttgacctgcaggtgagaagagttcgcccgggcgagtaccggcagcgggac
agcatagccaacaggacccgctcccgctcccagacccccaacaacacggtcacctacgag
agcgagcgcggaggcttccggcgcaccttctcccgctccgagcgggccggagtgagaact
tacgtcagcaccatcaggattcccatccggaggatcttaaacacgggcctgagcgagacc
acgtcagtcgccatccagaccatgctgaggcagatcatgacgggcttcggcgagctcagc
tatttcatgtacagcgatagcgatgcagatcccggtgcgccggctcccagtcagaacgcg
gagagctccgagccgcagagcggaggcgggggcacctcgggcggtgagaatgcagatgtt
agctcaggggaggtgtacgagggtgggcacgaggctagttcaacatctggtgccaggcgg
gaaggccggaatatgaggggatcggtcacttttgaagaaagcagttctctaccgttcctt
agccttgcacagtttttcctactcaacgaagatgacgacgaccagccgcgaggactcacc
aaagaacaaatcgacaacctagccatgaggaatttcggtgagagcgacgctctgaaaacc
tgcagcgtgtgcatcacagagtacacggagggcaacaagctccgcaagctgccgtgctcg
cacgagtaccacgtgcactgcatcgaccgctggctgtcggagaactccacctgccccatc
tgccgcagagcagtcttagcttctgggaacagagagagcgttgtctaa
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