Hirundo rustica (Barn swallow): 120762206
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Entry
120762206 CDS
T09369
Symbol
CASZ1
Name
(RefSeq) zinc finger protein castor homolog 1 isoform X1
KO
K25209
zinc finger protein castor
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120762206 (CASZ1)
Transcription factors [BR:
hrt03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120762206 (CASZ1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_CASZ1
zf-C2H2_CASZ1_1
Phage_YorO
Nop14
Merozoite_SPAM
Motif
Other DBs
NCBI-GeneID:
120762206
NCBI-ProteinID:
XP_039940278
LinkDB
All DBs
Position
22:complement(7233557..7317268)
Genome browser
AA seq
1984 aa
AA seq
DB search
MKVDYLSEYGFRLSDYAERTICTDAASGKPAMAAKRKGGLKLNAICAKLSRQVVFDHGGA
EQARVDKGPQPESINKDLPQPGTKDLGTEFSDGLSRVQKIEEDKRREVIEKWVNGEYNEE
PLLGRAEGKECKGTESAEVPPEGVYMVQPKGCSDEEDNGDEADTLRGSQDGNFLDDRDSD
GPAKDDAYRSSSGEPGSKLGAGTTSGEASSLRDYAATTMNEFLGMFGYDDQNMRDELARK
ISFDKLNTATSEATATAASLPGEDAMSKRARFSKYEEYIRKLKAGEQLSWPMHLAKSEEL
GSKLGKEPPSVLAQPIRVPAPDTSMLTETKATILPLPSPSSSQMQGLMSRASKYDFFIQK
LKTGESIRPQNGNTYKKASKYDLENVKYLHLFKPGEGSPDMGGAIAFKTGKVGRPSKYDV
RNIQKLTPVKAPVPSLAPASLASTPSSTPVAGPEQSISLPFNTPEYLKSTFSKTDSITTG
TVSTVKNGLPTDKPAVSEDVNIYQKYIARFSGSQHCGHIHCAYQYREHYHCLDPECNYQR
FTSKQDVIRHYNMHKKRDNSLQHGFMRFSPLDDCSVYYHGCHLNGKSTHYHCMQVGCNKV
YTSTSDVMTHENFHKKNTQLINDGFQRFRATEDCGTVECQFYGQKTTHFHCRRPGCTFTF
KNKCDIEKHKSYHIKDDAYAKDGFKKFYKYEECKYEGCVYSKATNHFHCIRAGCGFTFTS
TSQMTSHKRKHERRHIRSSGVLGLPASLLGSKDNEQEESSNDDLIDFSAMSSKNSSLSAS
PTSQQSSVSLIVPAAPSSAAELSSSQATKSANSMTPATKISGLLSQALPSNIPLALALSN
SALPGTAGSFFPIIPSRVSTPLPASSANLMTAGSSSTNPASSAPTDSSSQAVSGTGEPVA
TSSPAPAASIMERISASKGLISPMMARLAAAALKPSVALEAGNGQPAPPGRFNPVQVKQE
PVEAVGPSSATSQDPLQEHSLDLSVKDHGNESNGHTVSANSSLLSSLMNKMSKTSASLGN
LLNIKTEGEGSQAGAGEPTQYLGKAVKALVQEKLSEPWKMYLRRFGTKDFCDAQCDFLHK
VHFHCVVEECGALFSTLDGAIKHANFHFRTEGGTVKSNSESPFSTATENKASLAPLSPSA
ASATMAGAPALDVPTPNPAAMPSAPTLLAWKQLASTIPQMPQIPATVPNLAASPLATTSL
ENAKPQVKPGFLQFQENDPCLATDCKYANKFHFHCLFGNCKYVCKTSGKAESHCLDHINP
NNNLVNVRDQFAYYSLQCLCPNQHCEFRMRGHYHCLRPGCYFVTNITTKLPWHVKKHEKA
ERRAANGFKYFTKREECGRLGCKYNQVNSHFHCIREGCQFSFLLKHQMTSHARKHMRRML
GKNFDRVPTQVIGHTPRNENLPQVGSMAPSPASSGTPASFQGPPSMMDTETEEYMDYTGC
SPGGISSESSNMDRSCSSTPVGNESTSAGCLVPSTATAADDDATHTAPQPPPASLHPSFP
QALLRSPLPTLPYLFSPSCLSYSLLSATLGASRGIVMPAASTAGFAPIIATPTPVKSDVP
LVQDAAGNTITMPTASGAKKRFWIIEDMSPFGKRRKTASSRKMLDEGMMLEGFRRYDLYE
DCKDSSCQFSLKVTHYHCTRENCGYKFCGRTHMYKHAQHHDRVDNLVLDDFKRFKSSLSC
NFPDCQFSGNSTHFHCLRCGFRCTDSTKVTAHRKHHGKQDVISAAGFCQFSSSVDCEVPD
CKYKLKCSHFHCTYPGCKHTVVGMSQMDSHKRKHEKQERGELPAISPGPEGLAHSTLEYD
IQNSSINLDSSLNLSTDNNSSLFFLQNAAGVGLSDSLDLSKKQAEVSEGPSPSRAGAAPQ
ERGAGAPGSADVEDEDDSSQEDEEDDEEEMNEEEEDDEEEDDDDDDEEDEEEEDLNTDSE
ESLPDPEGLATKEDGEPEECASSTDHGDASRPQGEPALTPAPPPAPAPAPAAASASTIAP
AASP
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgattatttaagtgaatacggctttcgtctctccgactatgctgaaagaact
atatgcactgacgcagcctcaggaaaacccgcgatggctgccaagcgcaaaggcggcctg
aagctaaatgccatctgtgccaagctgagccgccaagttgtctttgaccatgggggagct
gagcaggcacgtgtggacaaggggccacagccagagagcatcaacaaggacctgccccag
cctgggaccaaagacctggggacagagttttcagacggactcagccgcgtgcagaagatc
gaggaggacaaaaggagggaggtgatcgagaagtgggtgaatggggagtacaacgaggag
cccttgctggggagagcagagggcaaggaatgtaagggcaccgagagcgcagaggtgccc
cccgaaggcgtttacatggtgcagcccaagggctgcagcgatgaggaagataacggggac
gaggcagacactctgaggggctcacaggatggcaacttcttggatgacagggattcagat
gggccagcgaaagacgatgcctaccggtcctccagtggcgaaccaggctccaagctgggg
gcaggaaccacctcaggggaagcttcatcactgcgggattacgccgccaccaccatgaac
gagttcctgggcatgttcggctacgacgaccagaacatgcgggatgagctggcccgcaag
atcagcttcgacaagctgaacactgctacctcagaggccactgccactgctgcctctctg
cctggcgaagatgccatgagcaaacgagcccgcttctccaagtacgaggaatacatccgc
aaactaaaagctggagagcagctctcgtggcccatgcacttggccaaatctgaggagttg
ggctccaagctgggcaaagagccgccctcagtgctggcacagcccattcgagtgccagct
ccagacacctccatgctgacagagaccaaagccactatcctgccactgccctctcccagc
agttcccagatgcagggcctgatgtcacgggcctccaaatatgacttcttcattcagaag
ctgaagacgggtgagagcatccggccacaaaatggcaacacttacaagaaggcctccaag
tatgacctagaaaacgtgaagtacttgcaccttttcaagcccggggaaggaagtccagat
atgggaggagccatcgccttcaagacaggcaaggtaggccggccttccaagtacgacgtg
aggaatattcagaagcttactccagtaaaagctccggtccccagcctggcccctgcttcc
ctcgccagtacccccagcagcactcccgtggccgggccagagcagtccatctcattgcca
ttcaacactcctgagtacctgaaatcaactttctccaagacagactccatcacaactgga
acagtctctacagtaaagaatggattacccactgacaaaccagccgtcagcgaagacgta
aatatttaccagaagtatattgccaggttctctggcagccagcactgtggacacatacat
tgcgcctaccagtacagagaacattaccactgcctggatcccgagtgcaactaccagaga
ttcactagtaaacaggacgtgattcggcattacaacatgcacaagaaacgtgataactcc
ctgcagcatggcttcatgcgcttcagccccctggacgactgcagcgtgtactaccacggc
tgccacctgaacgggaagagcactcactaccactgcatgcaggtgggttgtaacaaggtc
tatacaagcacctctgatgtgatgacccatgagaactttcacaagaagaatacacagctc
atcaacgacgggttccagcggttccgtgccacggaggactgcggcactgtggaatgccag
ttctacgggcagaaaaccactcacttccattgcaggagacctgggtgtacattcaccttc
aagaacaagtgtgacattgagaagcacaagagctaccacatcaaagatgatgcctatgcc
aaggatggcttcaagaagttctacaagtatgaggaatgcaagtatgagggctgtgtctac
agcaaagccaccaaccacttccactgcataagggcaggctgtggtttcaccttcacctcc
accagccagatgacctcccataaacgcaaacacgagcgccggcacatccggagctcaggg
gtgctgggcctacctgcctcactcctgggctccaaggataacgagcaagaggagtccagt
aacgatgaccttattgacttctcggccatgagctccaagaactccagcctgagtgcctcc
ccaaccagtcagcagtcttccgtttctctcatcgtcccagctgcaccctcctctgcggct
gagctctcttcctcacaggccaccaagtctgccaacagcatgacaccagccacaaagatc
tctggcctgctttcccaggctcttcccagcaatatacccttagccctggccctctccaac
tcagcacttccgggaacagctggatccttcttccccatcatccccagtcgggtctctaca
ccacttcctgccagctcggctaatctgatgactgctggttcttctagcaccaatccagca
tcatctgctcctacagattcctcatcccaggcagtttcaggaactggtgagccagtggct
acttcttcacctgctccagcagcctctataatggaaaggatctctgctagtaagggatta
atctctcctatgatggccaggctggcagcagctgcactcaagccctctgtggcacttgaa
gcagggaatggacaaccagcacctcccggccggttcaatccagtccaggtgaagcaggag
cctgtggaggccgtgggaccatcatctgccaccagtcaggaccccttgcaggagcacagc
ttggacctgagtgtcaaggaccatggtaatgaatcaaatggccacacagtctcggcaaat
tcatctcttttatcctcgcttatgaataagatgtccaagaccagtgccagccttggcaac
ctgctgaacattaagacagaaggcgaaggcagccaggctggggctggggagccaacccag
tacttgggcaaggcagtgaaggcacttgtccaggagaagctctctgagccatggaagatg
tacctgcgccggtttggcaccaaggatttctgcgatgcccagtgtgactttctccataag
gtgcatttccactgtgtggtggaggaatgcggggccctcttcagcaccctggatggagcc
atcaagcacgccaattttcacttccgaactgaaggtggaactgtgaaaagcaactcagag
tctcccttctcaactgctactgagaataaggcttcactggcccctttgtcaccatctgct
gcttctgccaccatggccggtgctcctgccctggatgtgcccactccaaatccagctgca
atgccctctgctcccacactacttgcttggaagcagctggcttcaaccataccccagatg
ccccagatcccagcaacagtgcctaacctggcagcttcacccttggcaacaacttccctg
gagaacgccaagcctcaggtcaaacctggatttctccaattccaggagaatgatccctgc
ttggcaacagactgcaagtatgccaacaaattccacttccactgtctctttgggaactgc
aagtatgtgtgcaaaacctctggcaaagcagaatcccactgcctggaccacatcaacccc
aacaataatctggtgaatgtgcgagaccagtttgcttactactccctgcagtgtctctgt
cccaaccagcactgtgaattccgcatgcgagggcattaccactgtctgcgtcctggctgc
tactttgtgactaacatcaccaccaagctgccctggcacgtgaaaaaacatgagaaggca
gagagaagggcagccaacggcttcaagtattttaccaagcgggaagaatgtggcagacta
ggttgcaaatacaaccaggtgaacagccacttccactgcatccgagagggctgccagttc
tccttcctgctcaagcaccaaatgacatcccatgccaggaagcatatgagaaggatgctg
gggaagaactttgatcgtgttcctactcaggttattggccacactccaagaaatgaaaat
ctcccccaggttggcagcatggcacccagcccagcctcatcaggaaccccagcttccttt
cagggacccccaagcatgatggacactgaaacagaagagtacatggattacactggttgt
agccctgggggtatctcctctgaatcttccaatatggaccgcagctgctccagcactcca
gtgggcaatgaaagtacatcagcaggctgcctggttccttctactgctactgctgctgac
gatgatgcaacccacactgcaccacaacctccaccagcatctctgcatccatctttccca
caagccctgcttaggtctccccttcccaccctcccctatctcttctctccatcttgtctc
tcatactccttgctcagtgccactctgggagccagcagaggcattgtcatgcctgccgcc
agcaccgctgggtttgcgcccatcattgccactccaactccagtaaaaagtgacgttccc
ttagtgcaggatgcagcagggaacaccatcactatgccaactgcctcgggggccaagaag
cgtttctggattattgaggacatgtccccatttggcaagcgccgcaagaccgcgtcctca
cgcaagatgctggacgaagggatgatgctggagggatttcggcgctatgacctctacgag
gactgcaaggactccagctgccagttctctctcaaggttacccactaccactgcacacgg
gagaactgcggctacaagttctgtggccgtacccacatgtataagcacgcccagcaccat
gaccgtgttgacaacctagtattggatgatttcaaacgcttcaagtcttcactgagttgt
aacttcccagactgtcagttctctggcaatagcacacacttccactgtctgcgctgcggc
ttccgctgcactgacagcaccaaggtgacagcccaccgcaagcaccacggcaagcaggat
gtcatcagcgctgctggcttctgccagttcagctccagcgtggactgcgaggtgcctgac
tgcaagtacaaactcaagtgctcccatttccactgcacctaccctggctgcaaacacacc
gtggtggggatgtcacagatggactcccacaagcgcaaacacgagaagcaggagcgaggg
gaactgcctgccatctctcccggccccgagggccttgcccactccactcttgagtatgat
atccagaactcttccatcaacctggacagctccctcaacctcagcactgacaacaacagc
tccctcttcttcctgcagaatgcggccggtgtggggctcagtgactccctggacctcagc
aagaagcaggcagaagtcagcgagggcccgtcccccagcagagccggggccgcgccgcag
gagaggggtgcaggggcacctggctctgctgatgtggaggacgaggatgactcttcccag
gaggatgaagaggacgatgaggaggagatgaatgaagaagaggaggatgatgaagaggag
gatgacgatgatgatgatgaggaggatgaggaggaggaagacctgaacacagattctgaa
gaatcgctgccagaccctgaaggtctggccactaaagaagatggagaaccagaggagtgt
gcttcttccacagaccatggcgatgcttccaggccacagggcgagccagccctcactcca
gccccacctcctgcccctgctccagctccggctgctgcctcagcctccaccattgctcca
gcagcttctccttaa
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integrated database retrieval system
