Hirundo rustica (Barn swallow): 120762211
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Entry
120762211 CDS
T09369
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04120
Ubiquitin mediated proteolysis
hrt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120762211 (UBE4B)
04120 Ubiquitin mediated proteolysis
120762211 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrt04121
]
120762211 (UBE4B)
Enzymes [BR:
hrt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120762211 (UBE4B)
Ubiquitin system [BR:
hrt04121
]
Ubiquitin ligases (E3)
U-box type E3
120762211 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
120762211
NCBI-ProteinID:
XP_039940294
LinkDB
All DBs
Position
22:7014244..7048592
Genome browser
AA seq
1333 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGSSSQPSTPLTSPQRETPPGPPGTAPAPGPSHSLGLSVHSM
TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLTDKESLSGSEVSEEQALQLVCKIFRVSWKDRDRDVIFL
NSLSAQFKQNPKDVFSDFKDLIGQILMEVLMMSTQARDENPFASLTATSQPIAAAARSPD
RSLILNMGSNPGSSPMFCNVGSFGSSSLSSLYGTSPAPPTNFTSYVPMTGSSLTPPASSV
PTPAVPPISGSPWWTQPSSPRYRPYTVAHSGGSAASATPRSLGVSIPSSSPSPPAVAAVT
SRHRPAATGAPLFTASPGALRRRPSFQSRIPPSLYDNPFSLLLLAVSDVSEDSSDEENED
DDFSCVQFGSSVGGSGSSSVSDSCSDHFTIENCKETEMLNYLIECFDRVGIEERKAPKMC
SQPTVSQLLSNIRSQCISHAALVLQGSLTQPRSLQQQSLLVPYMLCRNLPFGFIQELVRT
TYQDEEVFKQIFIPILKGLAVASKECSLDSDNFKYPLMALNELCEIKFGKTHPMCSLVVS
LPLWLPKSLSTGAGRELQRLSYLGAFFSLSVFAEDDNKVVEKYFSGPAITLENTRVVSQS
LQHYLELARQELFKILHSILLNGDTREAALGYMAAVVNANMKKAQMQTDDRLVSTDGFML
NFLWVLQQLSTKIKLETVDPMYIFHPRCRIELPTDETRVKATMEEVAAWTAELYRDPSPF
SEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATR
HREMLKRCKTQLKKLVRCKACADAGLLDENFLRRCLNFYGMVIQLMLRILDPAYPNIKLP
LTPEVPKVFASLPEFYVEDVAEFLFFIVQYAPQVLYEPCTQDIVMFLVVMLCNQNYIRNP
YLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYD
KFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRI
HEVQEEMKNKEQWDLLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHILTKQVQKPF
LRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFA
KAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDA
PDEFRDPLMDTLMTDPVRLPSGTIMDRSVILRHLLNSSTDPFNRQTLTENMLEPVPELKE
QIQAWMRDKQNDH
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgcggatgagatccgtcggaggcgcctggcacggctggcagggggc
tcctcatcgcagcccagcacgccgctgacgtccccgcagagagaaacccccccagggccg
ccgggcacggccccagcgccggggccctcgcacagcctgggcctcagcgtgcacagcatg
accccagctacctctcccatcggggcctcaggagtagcccaccgaagccagagcagcgaa
ggagtgagttccctcagcagttctccatcaaacagccttgaaacccaatctcagtccctc
tctcggtctcagagcatggacattgatagtgtctcctgtgagaaaagtatgtcccaagta
gatgtggattcaggaattgagaacatggaggttgatgagaacgatcgcagagagaaacgg
agtctgacagacaaggaatctctgtcaggttcagaagtgtcagaggaacaagctctacaa
ctggtctgtaagatcttcagagtctcgtggaaggaccgagacagagacgttattttcctg
aattcactctctgcccagttcaagcagaacccaaaggacgtgttttcagattttaaggac
ttgatcgggcagattttgatggaagtgctgatgatgtccacccaggcaagggatgagaac
ccctttgccagcctgacagccacctcccaacccattgctgcagctgcccgctctcctgac
agaagcctcatcttaaacatgggctccaaccctggaagcagccccatgttctgtaatgtg
ggctcctttggttccagctcgttatccagtctctatgggactagtccagctcctcctacc
aatttcacaagctatgtaccaatgaccggttcatctcttaccccaccagccagttcagtg
cccaccccagcagtgcctcccatttctggcagcccctggtggacacagccttcctctccg
cgctaccgcccctacaccgtggcgcattccgggggctccgctgcgtccgccacgccgcgc
tccctgggcgtttccatcccttctagttctccaagtcctccagccgtggctgccgtcaca
tcccgacacaggcccgcagccacgggtgcacctttgtttactgcttcccccggagccttg
cgcaggcgtccttccttccagagcaggattcctcctagtttatacgacaaccctttctcc
ctcctccttcttgctgtttctgatgtgtctgaggacagtagtgatgaagaaaatgaagac
gatgatttttcttgtgtccagtttgggtccagtgtgggaggctctggcagctcgagtgtt
tccgattcctgcagtgaccacttcaccattgagaattgtaaggagacagagatgctgaac
tacctcattgagtgttttgacagggttggaatagaggagagaaaagcaccaaagatgtgt
agccagccaacagttagccagttactgagcaacatccgatcccagtgcatttcacacgct
gctttggtgctacagggatccttaacacaaccaaggtcattgcagcagcagtctttgctg
gtaccatatatgctgtgtaggaatctcccatttggcttcattcaagaactggtgagaaca
acttaccaggatgaagaggtgttcaaacagatctttattcccatcttgaaaggcctggct
gtggcttccaaagagtgctctcttgacagtgacaattttaaatatccccttatggcacta
aatgaactttgtgaaatcaagtttgggaaaacacaccccatgtgcagtttggttgtctct
ttgcccttgtggttgcctaagtctttaagcacaggtgcaggaagagaactacaaagactt
tcctaccttggagccttcttcagtctgtctgtctttgctgaagatgataacaaagtggtt
gaaaagtacttctcagggcctgccattactcttgagaacacccgggttgttagccagtct
ttgcaacattacctggaattagcaaggcaagagctgttcaaaatcctgcacagtatcctg
ctcaacggggacacccgggaggcggctctcggctacatggcagctgtggtcaatgccaac
atgaagaaggcccaaatgcagacggacgatcgtttggtgtctacggatggcttcatgctc
aacttcctctgggtactacagcagctgagtacgaagataaagctggaaacagttgatccc
atgtacatattccatcccaggtgtcgcatcgagcttcccacagacgagacaagagtgaaa
gcaacaatggaggaggttgcagcctggactgctgaactttacagggatccgtctccgttt
tctgagccgaaattcccaacggaatgtttcttcctcaccctgcacgcccatcacctgtcc
atcctgcccagctgccgtcggtacatccggaggctgcgggccatcagggagctcaacagg
actgttgaagatttgaaaaacaatgaaagtcagtggaaggattctcctctggccaccagg
catcgagagatgctgaaacggtgcaagacacagctcaagaaactggtgaggtgcaaggct
tgtgcagatgctggtttgctggatgaaaacttcctcaggagatgcctgaacttctatggc
atggtgattcagctgatgcttcgcatccttgaccctgcctatcccaacataaaattgcct
ttaactcctgaggttccgaaagtatttgcatcattgccggagttttatgtggaagatgtt
gctgaatttttattttttattgtacaatatgctcctcaggtgctgtatgagccctgtact
caggacatagtgatgttccttgttgtgatgctgtgcaaccagaactacatccgaaatcct
tatttagtagccaagctggtggaagtgatgttcatgacaaatccagctgttcagccacgg
acacagaagttctttgaaatgattgagaatcaccctctctccactaaattgttagtcccc
tccttgatgaagttttacacagatgtggaacataccggagccactagcgagttctatgac
aagtttacaatccgctaccacatcagcaccattttcaaaagcctctggcagaatatagct
caccatggtacatttatggaagagttcaactctgggaagcagtttgttcgctacatcaac
atgctgataaatgacacaactttcttgctggatgagagtctggagtccctaaaacgtatc
catgaagtgcaagaggagatgaagaataaagagcaatgggatctgctgcccagggatcag
cagcaggcccggcagtcgcagctggctcaggatgagcgtgtgtcccgttcatatcttgcc
ctggcaacagaaactgttgatatgttccatatccttaccaagcaggtccaaaagcctttt
ctcagacctgaacttggaccacggctggctgctatgttgaactttaacttacagcaactg
tgtggccccaagtgccgtgacctgaaagttgaaaacccagagaaatatgggtttgaacca
aagaagctgttggaccaactgactgacatttatctgcagctggattgtgctcgctttgct
aaagcaattgctgatgatcagagatcctacagtaaagagctctttgaggaggttatctcc
aagatgaggaaggctggaatcaagtctaccatagcaatagagaaattcaaactgctggca
gagaaagtggaggaaattgttgccaagaatgcccgtgcagagattgattacagcgatgct
ccagatgaattcagagatccgctgatggacactctgatgactgaccccgtgaggctgccc
tccggaaccatcatggacagatcagtcatcttgaggcacctgctgaactcctccacagat
cctttcaatcgtcagacgctgacggaaaatatgctggaaccagtgccagaacttaaagag
caaatccaagcctggatgagagacaagcagaatgaccattaa
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integrated database retrieval system
