Hirundo rustica (Barn swallow): 120762217
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Entry
120762217 CDS
T09369
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03013
Nucleocytoplasmic transport
hrt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120762217
03015 mRNA surveillance pathway
120762217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120762217
Enzymes [BR:
hrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120762217
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120762217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
120762217
NCBI-ProteinID:
XP_039940317
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All DBs
Position
22:complement(1513012..1523281)
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AA seq
479 aa
AA seq
DB search
MATDSWALAVDEQEAAAESLSTLHLKDEKTKPDANGAVVKADDNVEKTEDEEKEDRAAQS
LLNKLIRSNLVDTTNQVEVLQRDPTSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
NALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPGNKYPQCLCLSPTYELALQTGK
VIEQMGNFYPDLKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPRDCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKRE
EETLDTIKQYYVLCNNRDEKFRALCNIYGAITIAQAMIFCHTRKTAGWLAAELSREGHQV
ALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAINMVDSKHSMNILNRIQEHFNKKINKLDTDDLDEIEKINN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcgtgggccctggctgtggacgagcaggaggcggcggccgagtcgctg
agcactttacacctgaaggatgaaaaaaccaaaccagatgccaatggtgctgttgtcaag
gcagatgacaatgtggagaagacagaggatgaggagaaggaggacagagctgcccagtcc
ttactgaacaagctgatccgcagtaacctggttgacaccacaaatcaggtggaggtgctg
cagagggaccccacatcacccctctactctgtcaagtctttcgaggagctgcgcctgaaa
ccacagctcctgcaaggagtctatgccatgggcttcaacaggccttctaagatccaagag
aatgccctgcccatgatgcttgctgaacccccacagaacctcatcgcacagtcacagtct
ggtactggcaagacagctgccttcgtcctggccatgctcagcagggttgagcctgggaac
aagtatccacagtgtttgtgcctttcccccacatacgagctggcacttcaaacaggaaaa
gtgattgaacagatgggaaacttctacccggacctgaaactggcgtacgctgtccgaggc
aacaaactggagagagggcagaagatctcggagcagatcgtgatcggcacacccggcacc
gtgctggactggtgctccaaactgaaattcatagatcccaagaagatcaaggtgttcgtg
ttggatgaggccgatgtgatgattgccacgcagggccaccaggaccagagcatccgcatt
cagagaatgctccccagggactgccagatgctcctgttttcagccacttttgaggattct
gtgtggaagtttgctcagaaagttgttcctgacccaaacattatcaaactgaagcgtgag
gaggagaccctggacaccatcaagcagtattatgttctgtgcaataacagagatgagaag
ttccgggctctctgtaacatctacggcgccatcaccatcgcccaggccatgatcttctgc
catactcggaagacggcggggtggctggcggccgagctgtccagggagggccatcaggtg
gccttgctcagcggggagatgatggtggagcagagagctgccgtgatcgagcgcttccga
gagggcaaggagaaggtgctggtgaccacaaatgtctgtgccagagggatcgatgtagag
caggtctccgttgttatcaatttcgacctgcctgtggataaggacggaaatccagacaac
gagacctacctgcaccgcatcggccgcaccggccgcttcggcaagcgggggctggccatc
aacatggtggacagcaagcacagcatgaacattctcaacagaatccaggagcatttcaac
aaaaagataaacaaattggatactgatgacttggatgaaattgagaagataaataactga
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