Hirundo rustica (Barn swallow): 120762475
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Entry
120762475 CDS
T09369
Symbol
CRTAM
Name
(RefSeq) cytotoxic and regulatory T-cell molecule
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120762475 (CRTAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hrt04515
]
120762475 (CRTAM)
04090 CD molecules [BR:
hrt04090
]
120762475 (CRTAM)
Cell adhesion molecules [BR:
hrt04515
]
Immunoglobulin superfamily
Nectin family
120762475 (CRTAM)
CD molecules [BR:
hrt04090
]
Proteins
120762475 (CRTAM)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
I-set
ig
Ig_2
C2-set_3
C2-set_2
DUF7027
Syndecan
US29
Motif
Other DBs
NCBI-GeneID:
120762475
NCBI-ProteinID:
XP_039940850
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Position
23:complement(3913511..3925150)
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AA seq
602 aa
AA seq
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MLLSVPGVLLRVPGVLLTLPGVLLRVPGVLLRVPGVLLRVPGVLLSVPGVLLRVPGVLLT
LPGMLLRVPGVLLSVPGVLLSVPGVLLTLPLLLLQGGFPGAACDPVTLKEGENLNLRCTF
STPSSSSNSTLQWLNPQGFTIFLNAQRVLRDQRYKLLRHSEDELSIQLSNVTVQDEGIYS
CFYYSSHFKSKSQNVEILAAPSHPVLEVSQDSGRGIKLSCHTQGCKPQPQISWLLDNGIE
LPGDTRHQLGADGKKWSTSSSLRILSYGPKVTASCAIQHPALRGQRLMASLPFQDLPSTG
CNKSTGLSEDAEVPSPSGNPAVPSSPANPGFSSPSASPEDPLTSSTSTSPEDLVASSLST
SQKDPEAPSPSTSPKDPEVSSPSTSPENPGFSNPSASPENPEVSSPSTSQKDPEASSPSA
PPEDSAVPSSAPAQPNLPGATSEGTGTAPSANGTEEEPPGTEVSPPRENTTGISTLGMRQ
SPESKGFVKKEKNLLLPILVAALIFVLLVIVLLFMVKLKKAHGVWKRENDVSEQTLESYK
SRSNEESPGHEKNGQAVNPKSNMQYVTEGHVETPEKIPETPEKNPGGKNVAKMFECGRET
DV
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgctgctcagcgtgcccggggtgctgctcagagtgcccggggtgctgctcaccctgccc
ggggtgctgctcagagtgcccggggtgctgctcagagtgcccggggtgctgctcagagtg
cccggggtgctgctcagcgtgcccggggtgctgctcagagtgcccggggtgctgctcacc
ctgcccgggatgctgctcagagtgcccggggtgctgctcagcgtgcccggggtgctgctc
agcgtgcccggggtgctgctcaccctgcctctgctcctgctgcaaggggggtttccaggg
gctgcctgcgaccctgtgacgctgaaggaaggagaaaacctaaatcttcgctgcaccttc
agcacccccagcagcagcagcaactctaccctgcagtggctgaaccctcagggtttcacc
attttcctcaacgcccagcgggttttaagagaccagaggtacaaactcctccgccactcc
gaggatgaattatccatccagctgtccaacgtgacagtgcaggatgaaggaatttacagc
tgcttctactacagcagccacttcaagagcaagagccagaatgtcgagattttggctgct
ccttcccatccagtgctggaagtatcccaggactcgggaagaggcatcaaactctcctgc
cacacccaggggtgcaaaccccagccccagatctcctggctgttggacaacgggatagag
ctcccaggtgacaccaggcaccagctgggagctgatgggaagaaatggagcacaagcagc
agtctgaggatcctcagctacggccccaaagtgacagccagctgcgccatccagcaccct
gcactcaggggacagaggctgatggcatctctccccttccaggacctccccagcacgggc
tgcaacaaatcaaccggactttcagaggatgcagaagttcccagcccttcagggaatcca
gcagttcccagttctccagcgaatccaggattttccagtccctctgcatcaccagaagat
ccattaacttccagcacctctacatccccagaagatctagtagcttccagcctctctaca
tcccaaaaagatccagaagctcccagcccctctacatccccaaaagatccagaagtttcc
agcccctctacatccccagaaaatccaggattttccaacccctctgcatccccagagaat
ccagaagtttccagcccctctacatcccaaaaagatccagaagcttccagcccctctgca
cccccagaagattcagcagttcccagctcagcaccagcccagccgaacctcccaggtgcc
acatccgaggggactggaacagcacccagtgcaaacggcaccgaggaggaacctcccggg
acagaggtgtcaccaccacgtgaaaacacgacggggatttccaccctgggtatgaggcaa
agccctgaatccaaaggcttcgtgaagaaggagaagaatctcctgctgcccatcctggtg
gctgctctgattttcgtgctgctcgtcattgtcctgctgttcatggtgaagctgaagaaa
gcccacggagtttggaagagagaaaatgatgtttcagagcagacgctggagagttataaa
tccagatctaacgaagagagtccaggccatgagaagaatggacaagctgtaaatcccaaa
tccaacatgcaatatgtaacagaaggacatgtggaaaccccagagaagattccagaaacc
ccagagaagaatccaggaggcaaaaacgtggcgaaaatgtttgagtgtggaagggagaca
gatgtataa
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