Hirundo rustica (Barn swallow): 120762502
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Entry
120762502 CDS
T09369
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04270
Vascular smooth muscle contraction
hrt04625
C-type lectin receptor signaling pathway
hrt04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
120762502 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
120762502 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
120762502 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120762502 (ARHGEF12)
Membrane trafficking [BR:
hrt04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120762502 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
120762502
NCBI-ProteinID:
XP_039940902
LinkDB
All DBs
Position
23:complement(4622609..4691821)
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AA seq
1539 aa
AA seq
DB search
MSGTQSTITDRFPLKKPSRHGSILSRESPADKKQKVERCSSTHDFDPTDSSSKKTKSSSE
ESRSETYGLVQRCVVIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNG
TLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSDVDLAAFGHMSPIMASPHSP
GTSGNAERITSPVLMGEENNIVHSQKVEILRKMLQKEQERLQVLQEEYGRTPSTRLLKEI
QEAKKHIPQLQEQLSKATGCTQDGVLSSRSVSESLQISEGEAESGDSGSKLDFSGDSPSR
PNSDTADSPRSGLKERIYPDESPEKAELQDTDSQSSVGSPLSRVGTQIIGAEDDDFDTEQ
EQINGQCSCFQNIELLKSRPAHLAVLLHHVVSQFDPAALLCYLYTDLYKQTNSKETRRVF
LEFYQFFLDRAANLKVPVPDEISLELDRRRPELLPEELHRQFIQTMQDKVCPEVQRNLED
FRQKRSMGLTLAEGELSRLDAERLRDRNAVERERSCAEQIIAKIEEVLMTSQPLEEDKSS
TMQYVILTYMKHLGVKVKEPRNLEQKRGRIGFLPKIKQSIKKEKEGEEKGKRRGFPNILG
PPRRPSRHDSSAIGRAMEMQKPRHPKHSPTASSVSPEPPESSKMRQSGSSSDGTDGPYPP
ANPMSPLAAGPFSSPEGSKDGDTGLKQPGEAPPASDSMDGTPRTPNNTFEFPSPLENLQE
EEGEAERMVDMGTPKPFRKTDSVGFADVQSEDELYDFDMDMDPPNWQQLVSREVLMGLKP
YEIKRQEVINELFYTERAHVRTLKVLHNVFYQRVTREGILSSSDKRKIFSNLEDILGLHV
ALNDQMKSVRKRNETSVIGQIGEDLLSWFSGAAEEKLKLATATFCSNQPFALEVIKSRQK
KDSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNIAKYTELPEEKEKVKKA
ADHCRQILNHVNQAVKESENKQHLEDYQRRLDLSYLKQSEDPMMDEFRNLDLTKRKMLHE
GPLTWKVNRDKTIDLYTLLLEDILVLLQKQDDKLVLKCHSKILASTADSKHTFSPIIKLN
TVLVRQVATDNKAFFVISMSATGAHIYELVAQTVSEKNVWQDLIAQMAGTVKMGSSRRVI
PLPQSGPGEEEREEEEQQKLKEQHDIPASSLQSPDKDLGLESPLILNPQSSSPIMSEKAK
VEGLLGAEGQFEKVQQAELALKDSSACYEHPASSSASVPEGQWARDALRNLGLLRQLLVQ
QLGLAEKGTLEDRQRLPRFRSVSQEAQTESGNELQPSDSKLQQPGEDRSLGRTREPAAGH
GPRTAAECPASGDATRPAGTEPGAGGALPMDSTNLEGSGSELEGLGAEESGERFFDAREA
HSDENPAESELLDRKEDEEVQIRISGNYLILDGYGTVQESSTDEEVSALVLQCTSHSQPP
LDCPQQQRQPLSPRDARSDGGSSPFPEELLGSRWAGLEEPCPFLGSPQLPLEIRVQLMQY
IHNIEDALEKLKEVEEDYSVLRRQGLAGSASTGEHSDKS
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtccacaatcacggacaggtttcctctcaaaaaaccttcgagacac
ggcagcattctgagcagagagtctccagcagacaagaagcagaaggttgaacgctgcagc
agcacccacgacttcgatcccacagatagctcctccaagaagacaaagtctagttctgag
gagagtagatccgagacgtatggcctggtgcagaggtgcgtggtgatccagcgggatgag
aacggcttcgggctgacggtcagcggggacaaccccgtcttcgtgcagtccgtcaaggaa
gatggagcagccatgcgggctggagtgcagacaggtgatagaattatcaaggtgaacggg
actctggtgacacactcgaaccatttggaggtggtcaagctgatcaagtcgggttcctat
gtagctctcactgtccaggggcgccctccagggtcgccccagattcccttggcggattcc
gacgtggatctggcagcttttgggcatatgtctcccatcatggcatccccccactctcct
ggcacgtcagggaatgctgaaaggatcaccagcccagtgctcatgggggaggagaataac
attgtccacagccagaaggtggagattctgaggaagatgctccagaaggagcaggagagg
ctgcaggtcctgcaggaggagtacggccggacaccctccacccgcctgctcaaggagatc
caggaggcaaagaaacacattcctcagctgcaggagcagctgtccaaggccacgggctgc
acgcaggatggagtcctgtcctccaggtctgtgtcggagtcgctgcagatcagcgagggg
gaggcggagagtggggacagcggcagcaaactggatttcagtggtgacagcccctccaga
cccaacagtgacactgctgatagtcctcgcagtggcctgaaggagaggatttatccagat
gagagcccagaaaaggctgagcttcaagatactgattcccagtccagtgttgggagtccc
ctgtcccgagtggggactcagatcattggagcagaggatgatgattttgacacggagcag
gagcagattaatgggcagtgcagctgcttccagaacatcgagctcctgaaatcccgccca
gctcacctggctgttctcctgcaccacgtggtgtcccagtttgatcctgcagcgctgctg
tgctacctttacacagacctgtacaaacagaccaattccaaagagacccggcgtgttttc
ctggagttttaccagtttttcctggacagagctgcaaacctgaaagtcccagttccagat
gaaatctccttggaattagacaggagacggccagagctcctccctgaagagctccaccgc
cagttcatccaaaccatgcaggataaagtgtgtccagaggttcagaggaacctggaagat
ttcaggcagaagaggagcatggggctgaccctggccgagggggagctgagccggctggac
gcggagcggctccgcgaccgcaacgccgtggagagggagaggagctgcgcagagcagatc
atcgccaaaatcgaggaagtgctgatgacatctcagcctctggaagaagacaagagctcc
acgatgcaatatgtgatcctcacctacatgaaacacctgggagtcaaagtcaaagagcct
cggaacctggagcagaagcggggccggatcggtttcctgccaaagatcaagcagagcatc
aagaaagagaaagaaggagaggagaaagggaagaggagaggcttccccaacatcctgggc
cccccgaggagaccaagccgacacgacagcagtgcaatcggcagggccatggagatgcag
aagcccaggcaccccaagcactcgcccacggcctcttccgtgagcccagagccccccgag
tccagcaagatgcgccagagcggctcctccagcgacggcaccgacggcccttacccccct
gccaaccccatgtcccccctggcagcggggcccttctcctccccggagggcagcaaggac
ggtgacacaggtttgaagcagcctggggaagccccacctgccagtgactccatggatggc
accccccgcacgcccaacaacacctttgagttcccatctcctctggaaaacctgcaggag
gaggagggagaggcagagaggatggttgacatgggaacaccaaagccttttcgcaagacg
gacagtgttggctttgcagatgtgcagagtgaggatgagctctatgacttcgacatggac
atggaccctcccaactggcagcagctcgtgagcagggaggtgctgatggggctcaaaccc
tacgagatcaagcgtcaggaagtgataaatgagctgttctacacggagcgcgcccacgtg
cgcacgctgaaggtcctgcacaacgtcttctaccagagggtcaccagggagggcatcctc
agctccagtgacaagaggaaaatcttctccaacctggaggatatcctcgggctgcacgtt
gcactgaacgatcagatgaaatctgtccgaaaaaggaacgagacttctgtcattggccaa
atcggggaagatttgctctcctggtttagtggagcagcagaggagaagctgaaacttgcc
actgccaccttctgcagcaaccagcccttcgctctcgaggtcatcaagtcccgccagaag
aaggactcgcgcttccagaccttcgtgcaggatgctgagagcaatcccctgtgccggcgg
ctgcagctgaaggatatcatccccacggagatgcagaggttgacgaaataccccctgctg
ctggataacattgctaaatacacagagctgcctgaggagaaggagaaggtcaagaaagca
gcagatcactgtcgccagatcctcaaccacgtgaaccaggctgtcaaagagtcagagaac
aagcagcacttggaggattatcagcggaggctcgacctctcctacttgaagcagtcggag
gatcccatgatggatgagttcaggaacctggatctaacaaagagaaaaatgctccacgaa
gggcccctgacctggaaagtgaatcgtgacaaaaccatcgatctgtacactctgctgctg
gaggacatcctggtgctgctgcagaagcaagatgacaaactggtgctgaagtgccacagc
aagatcctggcgtccacggccgacagcaaacacaccttcagccccatcatcaaactcaac
accgtgctggtccgccaggtggccacagataacaaagctttcttcgtcatctccatgtca
gcgacgggggctcacatctacgagctggtggcacagactgtctcagagaagaatgtctgg
caggaccttatagctcagatggcaggaactgtgaagatggggagcagcagaagagtgatc
ccactgcctcagtcaggccctggcgaagaggagcgtgaagaagaggagcagcagaagctg
aaagagcagcatgacattcctgccagcagcctgcaaagtccagataaagatttgggcctg
gagtctcccttaatactgaaccctcagtcctcttcgcccatcatgtctgaaaaggccaag
gtggaggggctgctgggggctgaggggcagtttgagaaggtgcagcaggcagagctggca
ctgaaggactcctctgcctgctacgaacacccagccagcagctcagcctcggtgccagag
gggcagtgggcacgggatgccctgaggaacttggggttgctgcggcagctcttggtgcag
cagctgggcctggccgagaagggcaccctggaggacagacagcgcttgcccaggttcagg
agcgtgtcccaggaagcccagacagagagcgggaacgagctgcagccctctgacagcaaa
ctgcagcagcctggagaggacaggagcctcggcagaactcgagagcccgcggccgggcac
ggcccccggactgcagccgagtgcccggcctcgggggacgccacgcggccggcgggcacc
gagcccggggccgggggcgctttgcccatggacagcacgaacctggagggctccggctcg
gagctggaggggctgggggctgaggagagcggggagcgtttcttcgatgcccgggaagct
cacagcgacgagaaccccgccgagagcgagctgctggacaggaaggaggacgaggaggtg
cagattcggatctcaggaaattatttgatcctcgacggatacggaacggtgcaggagagc
tccacggacgaggaggtgtcagccctggtcctgcagtgcacctcccacagccagcccccc
ctggactgtccccagcagcagcggcagcccctgtccccaagggacgcccgctcggacggg
ggcagctccccgttccccgaggagctgctgggctcgcgctgggcagggctggaggagccc
tgtcccttcctgggcagccctcagctccctctggagatccgagtgcagctcatgcagtac
atccacaacatcgaggatgccctggagaagctgaaggaggttgaggaggattacagcgtt
ctgcggcgccaggggctggctggctcagcctccacaggagagcactcagacaaaagctag
DBGET
integrated database retrieval system
