Hirundo rustica (Barn swallow): 120762513
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Entry
120762513 CDS
T09369
Symbol
CADM1
Name
(RefSeq) cell adhesion molecule 1 isoform X1
KO
K06781
cell adhesion molecule 1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120762513 (CADM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hrt04515
]
120762513 (CADM1)
Cell adhesion molecules [BR:
hrt04515
]
Immunoglobulin superfamily
Nectin family
120762513 (CADM1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
C2-set_2
Ig_5
Izumo-Ig
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
120762513
NCBI-ProteinID:
XP_039940935
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All DBs
Position
23:6489597..6624685
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AA seq
486 aa
AA seq
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MAGRAQPSGPAGSGAPGLLPLLLLLLSAAAIIPRGDGQNLVTEDVTVVEGDVATISCRVK
NSDDSVIQLLNPNRQTIYFRDFRPLKDSRFQLVNFSNSELRVSLTNVSVSDEGRYFCQLY
TDPPQEIYTTITVLVPPRNLVIDIEKETAVEGEEIELNCTAMASRPATTIRWFKGNKELT
GKSEVERWSDMYTVTSQLLLKVGREDDGVPVICLVDHPAVKDLQTQRYLEVMYKPQVRVS
QNYPLQGLTREGEPLELTCTAFGKPQPTDMRWLRVDDEMPQHVVVSGSNLLISNLNKTDN
GTYRCEASNAVGKSHADYMLFVYDPPTTIPPPTTTTTTTTTIPTTITDTTATTEPAVHGF
TQLPNSAEELDYGDLSGTSVPPTAPTEALPTVQLSNASLAFRPDSRAGEEGAIRSVDHAV
VGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGQNNSEE
KKEYFI
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcgcgcccagcccagcggccccgcgggcagcggcgccccggggctcctcccg
ctgctgctgctgctcctctccgccgccgccatcatccccagaggtgatggtcagaacctg
gtgacggaggacgtgacggtggtggagggggacgtggccaccatcagctgccgtgtcaag
aacagcgacgactcagtgatccagctgctgaaccccaacaggcagaccatctatttcaga
gatttcaggccgctgaaggacagcaggttccagctggtgaacttttccaacagcgagctg
cgagtgtccctgacgaacgtgtccgtctctgatgaggggaggtacttctgccagctctac
accgacccgccccaggagatctacaccaccatcacggtgctcgtcccgccgcgcaatttg
gtaattgatatcgagaaagaaacggccgtggagggagaggagatcgagctgaactgcacc
gccatggccagcagaccagccaccaccatcagatggttcaaaggcaacaaggagctcacc
ggcaagtcggaggtggagcggtggtccgacatgtacacggtgaccagccagctcctgctg
aaggtggggcgggaggacgatggggtccctgtcatctgcctggtggatcaccctgcggtc
aaagacttgcagacacagcgttacctggaagttatgtataagcctcaagtgcgcgtttct
cagaattaccccttgcaaggcctgacgagagaaggggagccgctggagctgacgtgcaca
gcctttggaaagccacagcctacggacatgaggtggttaagagtagatgatgagatgcct
caacacgttgtagtgtctggttcaaaccttctcattagtaacctaaacaaaacagataat
ggtacataccgctgtgaggcttccaacgcggtggggaaatcacatgcggattacatgctg
tttgtatacgatccccccacaactatccctcctcccacaacaaccaccaccactaccacc
accatccctaccaccatcacagacacaacggcgacgacagaaccggcagttcacggcttt
actcagttgcccaattcggccgaggagctggactatggggatctctcaggtacatctgtc
ccgcccacagctccaaccgaggctctgccgactgtgcaattaagtaatgcatcccttgcc
ttccgcccagattcccgcgcaggtgaggaaggggccatacggagcgtggaccatgccgtg
gttggtggcgtcgtggccgtcgtcgtctttgcgatgctttgcctgctcatcattttaggg
cgatattttgccagacataaaggtacatacttcactcacgaagccaaaggagcagatgat
gcggccgacgcagacacagccatcatcaacgcagaggggggacaaaacaactccgaggaa
aagaaagagtacttcatctag
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