Hirundo rustica (Barn swallow): 120762599
Help
Entry
120762599 CDS
T09369
Symbol
DDX25
Name
(RefSeq) ATP-dependent RNA helicase DDX25 isoform X1
KO
K18656
ATP-dependent RNA helicase DDX25 [EC:
5.6.2.7
]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120762599 (DDX25)
Enzymes [BR:
hrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120762599 (DDX25)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120762599 (DDX25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
Queuosine_synth
Motif
Other DBs
NCBI-GeneID:
120762599
NCBI-ProteinID:
XP_039941089
LinkDB
All DBs
Position
23:complement(1724734..1730223)
Genome browser
AA seq
470 aa
AA seq
DB search
MNKLIHTSLVESQQHVEILQRDPKSPLFSIKTFEELPLKKELLQGVYMMGFNRPSKIQEQ
ALPLMLAYPPQNLIAQSQSGTGKTAAFVLAMLSRASASEKYPQCLCLAPTYELALQIGQV
VRAIGKFCTDIKVNYAVRGNRVLKGTVLEEQIVIGTPGTTLDWCFKQRILDLTKISLFVL
DEADIMIDTQGLSCQSIRIHRALPKSCQVLLFSATYKEPVRAFAERIIPNPMVIKLREEE
LTLTNIRQYFMVCQSSDEQYRALCNLYGTFTIGQVMIFCQTRRLADWLAGKMSRDGHQVA
ILTAELTVVQRASVIQRFREGKEKVLIATNVCARGIDVQQVTTVVNFGIPMDQDGEPDFE
TYLHRIGRAGRFGHRGIAFSVVEKGALELVHKIEEYFRECPRSGRRGRDCDPLQLISCSH
IVLVGLLLSPGLISLGTNAAFRVTFAPQQANFPRNSHGGCVQLARDVTSP
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaattgatccacacatccctggtggagtcccagcagcatgtggagatcctgcag
cgggatcccaagtccccactcttctccatcaagacctttgaggagctgcccctgaagaag
gagctcttgcagggggtttatatgatgggcttcaacagaccatccaaaatccaggagcag
gctctgccgctcatgctggcatacccgccccaaaatctgattgcccagagccagtcaggg
acagggaaaacagcagcttttgtcttggccatgttgagcagagccagtgccagcgagaaa
tatccacagtgcctctgcctggctcccacctacgagctggctctgcagatcgggcaggtg
gtgcgggccattgggaaattctgcactgacatcaaggtgaactacgctgtccggggaaac
cgagttctgaagggcacagtgctggaggagcagatcgtcatcggaacgccgggcaccaca
ctggactggtgcttcaagcaacgcatcctggacctgacaaagatctccttgttcgtgctg
gacgaggccgacatcatgatcgacacgcagggcctctcctgtcagagcatccgcatccac
agggctcttcccaagagctgccaagtgctgctgttctcagccacttacaaggagcccgtg
cgggccttcgccgagcggatcatccccaaccccatggtgatcaagctgcgtgaggaggag
ctcaccctgaccaacatcaggcagtacttcatggtgtgccagagctcggatgagcagtac
agagccctctgcaacctctacggcaccttcaccatcggtcaggtcatgatcttctgccag
acgcggcggctggcggactggctggcggggaagatgagccgggacgggcaccaggtggcc
atcctgacggcggagctgacggtggtgcagcgggccagcgtcatccagcgcttccgcgag
ggcaaggagaaggtcctcatcgccaccaacgtctgtgccagaggcattgatgtgcagcag
gtcaccaccgtggtgaacttcggcatccccatggatcaggacggcgagccggattttgag
acctacctgcaccgcattgggagggcgggacgcttcgggcaccgcggcatcgccttcagc
gtggtggagaaaggggccctggagctcgtgcacaagatagaggagtatttccgtgagtgt
ccgcgctccgggaggcggggtcgggactgtgatcccctccagctcatttcctgttcccat
atagtccttgtcgggctgctcctctccccagggctcatctcgctgggaacaaatgcagct
tttagggtgacttttgctccccagcaggcaaatttcccaagaaacagccatggaggttgt
gtgcaacttgcaagggatgttaccagtccctag
DBGET
integrated database retrieval system
