Hirundo rustica (Barn swallow): 120763096
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Entry
120763096 CDS
T09369
Symbol
SRSF4
Name
(RefSeq) serine/arginine-rich splicing factor 4 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03040
Spliceosome
hrt05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120763096 (SRSF4)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120763096 (SRSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrt03041
]
120763096 (SRSF4)
Spliceosome [BR:
hrt03041
]
Common components
Common spliceosomal components
SR proteins
120763096 (SRSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
120763096
NCBI-ProteinID:
XP_039942102
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All DBs
Position
25:6450586..6459513
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AA seq
476 aa
AA seq
DB search
MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDL
CGERVIVEHARGPRRDSSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDL
KDYMRQAGEVTYADAHKGRKNEGVIEFKSYSDMKRALEKLDGTEVNGRKIRLVEDRPGSR
RRRSYSRSRSHSRSRSRSRHSRKSRSRSPSSSRSKSRSRSRSVSRSRSKSRSRSKSRSRG
QKERSRTPSKEDKSRSRSRSAEKSRNKSKDKSESILHNSDEKTKSRSRSKEKSRSTSGSK
ERGEARESVRSRSKEKSRSKDREKSISKARSRSKSRDESRSRSHSKDKRKSRKRSRDDSR
SRSRSRSKSEKSKRRSKRDSKGSSKRRKDSHERSRSGSKGKEQLKSESDKKEAKGEGEGA
VSRSRSRSISKSKPNVKSDSRSRSKSVSKPRSRSKSRSRSASRSHSRSQSRSRSRS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgggtctacatcggccgcctcagctaccaggcccgggagcgcgacgtggagcgc
ttcttcaagggctacggcaagatcctcgaggtggatctcaagaacgggtatggctttgtg
gagtttgatgatctgcgtgatgctgacgacgctgtttatgagctaaatgggaaagatctg
tgtggggagagagtgatcgtggagcacgcccggggcccacgccgggacagcagttacggt
tctggacgcagtggatatggttatagaagaagcggaagagataagtacggtcccccgacc
cgtacagaatacagattgattgtggaaaatttgtcgagccgctgcagttggcaggatctg
aaggattatatgcgtcaggcaggggaagtgacatatgcagatgcacacaaaggaaggaaa
aatgaaggtgtgattgagttcaaatcctattctgacatgaaaagagcccttgaaaagctg
gacgggacagaagtaaatggcagaaagattagattagtggaagacagacctggatcgaga
cggcgccgctcttactccaggagccgaagccattcaaggtctcgctctcgaagcagacac
tcccgtaagagcaggagccgcagtcccagtagcagccgctccaagagcagatccagatcc
aggtctgtgtcccgttccagaagcaagagccgtagtcgaagcaagagccgtagcagaggc
cagaaggagagaagcaggactccaagtaaagaggataaaagtaggagccgcagcaggagt
gcagagaaatcccgaaacaaaagcaaggataaatctgagagtattctccataacagcgat
gagaagaccaagagcaggagccgcagcaaggaaaagagcaggagcacgagtgggagtaag
gagagaggagaggcgagggagagtgtgaggagcagaagcaaggagaagagtagaagcaaa
gacagggagaagagcattagcaaggctagaagtaggagcaaaagtagggatgagagtagg
agcaggagccacagcaaggataaaaggaaaagtaggaagaggagcagggatgacagcaga
agtagaagccggagccgcagcaagagtgagaaaagcaagaggcgcagcaagcgagacagc
aaaggtagcagcaagagaaggaaggacagccacgagcggtccaggtcaggctccaaagga
aaggagcagctcaaatccgagtcagataagaaggaggcaaaaggagagggggagggtgca
gtgtcccgctccaggtctaggtccatttccaagtccaaaccaaatgtcaaatcagactct
cgttccaggtccaaatctgtttcaaagccaaggtcccggtccaaatccaggtctaggtct
gcctctaggtcacactcccggtcacagtcaaggtcccgctctagatcctaa
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