Hirundo rustica (Barn swallow): 120763098
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Entry
120763098 CDS
T09369
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 4 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120763098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120763098
03036 Chromosome and associated proteins [BR:
hrt03036
]
120763098
Transcription factors [BR:
hrt03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
120763098
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
120763098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
Chromo_MORC2_6th
MSL3_chromo-like
MMU163
Motif
Other DBs
NCBI-GeneID:
120763098
NCBI-ProteinID:
XP_039942105
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All DBs
Position
25:6465621..6507362
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AA seq
689 aa
AA seq
DB search
MPRQAVPCSDSQTREQMDCFENGKICTQTGSQQHKESSGCQVTEAGRPVRRLRRKRRLPL
DSEDEEENAYEDEEKNKSNNMKSRRNTKPIKQVLPGKKKAWNWSSYLEEEQMPAAPQKLF
REYQSFPQGRNGFKVGMKLEGVDPEHPSRFCVLTVAEVQGYRMRLHFDGYPECYDFWANA
DSSDIHPVGWCEKTSHKLLPPKGFKEGEFNWTSYLKNCKAQAAPKSLFKTLSSPVTPSGF
RLGMKLEAVDKKNPSLVCVATITDMVENRLLIHFDNWDESYDYWCETSSPYIRPVGYCQE
TGIPLTTPPGHKDSKAFSWEKYLEETNSQAAPARAFKLRPPHGFQVNTKLEAVDRRNPIL
IRVATIVDKDNHRVKIHFDGWDHHYDFWVDADSPDIHPVGWCDKTGHALQVPLGAEDPEG
AVGQACPTPGCQGIGHIRGPRYGTHYTLVGCPYSDVNLSRENLLQDRLSGERPSAGNSMQ
KARRVETPGPLLRAGESSQGDSSQSRKSAPDSEKWCQSSIHTPSEQSENSRERGWGEEDS
SADIKATPKTLGCSHAYIKFQLVKQESNGKGPDLDLQQALHQSIFMPSLASNPTHRLHLF
WEQHCRLLPEVSGLTAKQVAKWTVEEVVSFIQRLPGCKEQASVFREEQIDGEAFLLLKQN
DIVKILSIKLGPALKIYNAILMFKSAEDN
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgcccagacaagccgtgccctgctctgattcccagacccgtgagcaaatggattgcttt
gagaatggaaagatttgtactcagacgggctcccagcagcacaaggagagcagtggctgt
caggtgactgaagctggcagacctgtcagacgtctccggaggaagagaagattgcctctg
gattcagaggatgaggaagaaaatgcatatgaggatgaggagaagaataaatcaaataat
atgaaaagccgcagaaacactaaaccaataaaacaagtgcttcctggaaagaagaaggca
tggaactggtcttcctacttggaagaggaacagatgccagctgctccccaaaagctgttc
agagagtatcaatcatttccacaaggccgaaatggatttaaagttggaatgaaattggaa
ggggtggatcctgaacacccttctcgattctgtgttctcacagtggctgaggtccagggg
tacaggatgcgactgcacttcgatggttacccagagtgctacgacttctgggctaatgct
gattcctcagacatccatcctgtgggctggtgtgaaaaaacaagccataagctgctccct
cctaaaggtttcaaggagggagaatttaattggacttcctatctgaagaactgcaaagct
caagcagctccaaaaagcctttttaagaccctcagcagtcctgtcacaccttctgggttt
cgtctgggaatgaaattggaggcggtggacaagaagaacccgtcgctggtttgtgtggcc
accatcacagacatggtggaaaaccggctgctgatccatttcgataactgggatgagagc
tatgactactggtgtgaaacaagcagcccatatatccgtcctgtcggatactgccaagaa
actggaatcccactgacaacaccacctggacacaaggattccaaagccttctcatgggag
aaatacttggaagaaactaattcccaagcagccccagcaagagcctttaaactgcgtcct
cctcatggattccaggttaatacaaagttagaggctgtggacagacgaaatcccatcttg
ataagagtggcaacaatcgttgacaaagacaaccatcgtgtcaagatacatttcgatggc
tgggaccatcactacgatttctgggtggatgcagatagccctgacatccatcctgtgggc
tggtgtgacaaaactggacacgctctgcaagtccctctaggtgctgaagatccagaggga
gcagtgggacaggcgtgtcctactccgggctgccagggcatcgggcacatccggggcccc
cgatacggaacccattacaccttagttggctgcccatactctgatgtgaacctcagcaga
gaaaacctgttacaggaccggctgagtggggagagaccttctgctgggaacagcatgcag
aaagccaggagggtggaaacccctggcccattgctgagagcaggggagtcttctcagggt
gactcttcacaatccagaaaatctgcaccagacagtgaaaagtggtgtcaaagcagcatc
cacactccatcagagcagtcggaaaacagtcgggagagaggctggggagaggaggattcc
tctgcagacatcaaagccacaccaaaaacgcttgggtgctcacatgcctatatcaagttt
cagctggtgaaacaggaaagtaatgggaaaggccctgatttggatctccagcaggccctc
caccagtctatcttcatgccttccctggcctctaacccgacccaccgcctgcatctcttc
tgggagcagcactgcaggctcttgccagaggtctcgggcctgacagccaaacaagttgcc
aaatggactgtggaggaggtggtgagctttatccagcgtttacctggctgcaaagaacaa
gcatctgtgttcagggaagagcagatagacggcgaggccttcctgctcctcaagcagaat
gacatcgttaaaatactcagcatcaagctgggccctgccctgaagatctacaatgccatc
ctcatgttcaagtctgcagaagacaactga
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