Hirundo rustica (Barn swallow): 120763117
Help
Entry
120763117 CDS
T09369
Symbol
TSHZ1
Name
(RefSeq) teashirt homolog 1
KO
K09236
teashirt
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120763117 (TSHZ1)
Transcription factors [BR:
hrt03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120763117 (TSHZ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_2
zf-C2H2_4
zf-C2H2
zf-C2H2_6
Zap1_zf1
zf-met
Zf-C2H2_ZNF451
DUF760
Homeobox_KN
zf-C2HC_2
zf-C2H2_12
DUF7410
DUF7086
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
120763117
NCBI-ProteinID:
XP_039942142
LinkDB
All DBs
Position
1:59613014..59667701
Genome browser
AA seq
1074 aa
AA seq
DB search
MPRRKQQAPRRSAAYVPEEELKAAEIDEDSVEDDGLSLDIQENEYLCNEEAEIKEAQSYQ
NSPVSTATNQDAGYGSPFSENSDQLAHFKSTSSKEEKEDPQCTDNVSYPQDSLAQIKAVY
ANLLSETCWSSLALDLKKSNPTTSNNGISQNENMTSTDTNANSQSACTTSTNTSTSTTTS
STSNSNSNSGGSGYDWHQAALAKTLQQTSSYGLLPEPSLFSTVQLYRQNNKLYGSVFTGA
SKFRCKDCSAAYDTLVELTVHMNETGHYRDDNRDKEADKTKRWSKPRKRSLMEMEGKEDA
QKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVPLKEPVPAITKLVPSTKKRALQDLASPC
SPEPTGITAEASLGESAKDQKTANPYVTPNNRYGYQNGASYTWQFEARKAQILKCMECGS
SHDTLQQLTAHMMVTGHFLKVTNSASKKGKQLVLDPVVEEKIQSIPLPPTTHTRLPASNI
KKQPDSPAGSTNSEEKKDLEKEKLVVTETEKKIKEESEDSTEKFEPTTLYQYLREEDLDD
SPKGGIDILKSLENTVTTAISKAQNGAPSWGGYPSIHAAYQLPGTVKPLQPTVQSVQMQP
SYASSVKSLSSEHNALIHSPGNLTPPPHKSNVSAMEELVEKVTGKINVKKEEKPLEKEKS
SPVKPTSPAAKENKDFPKAEEINNKQQPKKSSESEVQKVKKDSPAEAHTPNGTEPLKTKV
ANGCNNLGIITDHSPEPSFINPLSALQSIMNTHLGKISKPVSPSLDPLAMLYKISNSMLD
KPIYPTTPVKQADAIDRYYYENSDQPIDLTKSKTKPLVSSVADSASSPLRESALLDISDM
VKNLTGRLTPKSSTPSTVSEKSDADGSSFEEALDELSPVHKRKGRQSNWNPQHLLILQAQ
FASSLRETPEGKYIMSDLGPQERVHISKFTGLSMTTISHWLANVKYQLRRTGGTKFLKNL
DTGHPVFFCNDCASQFRTASTYISHLETHLGFSLKDLSKLPLNQIQEQQNVSKVLTNKTL
GSLGIAEEDLGSTFQCKLCNRTFASKHAVKLHLSKTHGKSPEDHLIYVTELEKQ
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggagaaagcagcaggcaccccggcgctccgcagcatatgttcctgaggaagaa
ttgaaagcagcagaaatagatgaagacagcgtggaagatgatgggctgtctctggacatc
caggagaatgagtatttgtgcaatgaagaagcggagatcaaagaggctcaaagctaccag
aactccccagtcagcactgcaactaatcaggatgcaggctatggttcgccgtttagtgaa
aacagcgatcagctggcccatttcaaaagcacttcctctaaagaagagaaagaggatcct
cagtgcacagacaatgtttcctatccacaggacagcttggcacaaataaaagctgtgtat
gcaaatctgctttcagagacttgctggtccagtttagctttggacttaaagaaatccaat
ccaaccaccagcaacaacggaatcagccaaaatgaaaacatgaccagtactgacaccaat
gccaattcccagagtgcttgtactaccagtaccaacactagtaccagtacaaccaccagt
agtacaagtaacagtaatagtaacagtggtggctcaggttacgactggcaccaagctgca
ttagctaaaactctgcagcagacctcatcgtatggacttctcccagagccgagtctcttc
agcacagtacagctttaccggcaaaacaataaactctatgggtctgtgttcaccggtgcc
agcaagttccgatgcaaagactgcagcgcagcctacgacacgctggtggagctaacggtg
cacatgaatgaaactggacattaccgtgatgacaacagagataaagaagctgataagacc
aagcggtggtcaaagcctaggaaacgatcacttatggaaatggaaggcaaagaggatgcc
cagaaagtgctgaagtgcatgtactgtgggcattcgtttgagtctttgcaagacctcagc
gtccatatgataaaaacaaagcattaccagaaagtgcctctgaaggagccagtaccagcc
atcaccaaattggtcccttctaccaaaaagcgagcacttcaggacttggcttcaccttgt
tcacctgagccaacagggatcacggcagaagcttcactgggtgagtctgcaaaggatcag
aaaactgccaacccctacgtgactccgaacaaccgctatggctatcaaaatggtgctagc
tacacttggcagtttgaggcacgcaaagcccagatattgaaatgcatggaatgtggcagt
tcccatgatactttgcagcagctcactgctcacatgatggtcaccggtcatttcttgaaa
gtgaccaattctgcttccaaaaaaggcaaacagctagtgttggacccagtggtggaggag
aaaatacagtctatacctcttccacccaccacccacacaaggctaccagcctccaacatt
aaaaagcagcccgattccccagcgggctccacaaactcggaggaaaagaaagacctagag
aaggaaaagctggtggtcactgaaacagagaagaaaattaaagaagagagtgaggactct
acagagaaatttgagccaacaactttgtatcaatacctcagagaggaggacctagatgat
agtcctaaaggcggaatagacatattgaaatccctggagaacacagtgacaacagccatc
agcaaagcccagaacggagccccttcctggggaggatatcccagtattcatgcagcttac
cagctcccaggaacagtcaaaccccttcagcccacagtgcagagcgttcaaatgcagcca
tcctacgcaagcagtgtgaaatcactgtcgtcagaacacaacgcactcatccattcccca
ggcaatctcacacccccacctcacaagagcaatgtatctgctatggaggagctagtggag
aaagttacaggtaaaatcaacgtgaagaaggaagagaaacctttggagaaagagaagagt
tctccagttaaacccacatcacccgctgctaaagaaaacaaggacttcccaaaagcagaa
gaaataaataataaacagcagccaaaaaagagctctgagtctgaagttcagaaggtcaaa
aaagatagtccagcagaagcacatacgccaaatggtacagagccacttaaaacaaaggtt
gcaaatggctgtaacaatttaggaattatcacagatcattcacctgagccatccttcatt
aatccattgagcgctttgcagtccattatgaatacccacttaggaaaaatttctaagcca
gtaagcccttctctggaccctttggccatgctgtacaaaattagtaacagcatgttggac
aaacccatttacccaaccactccagtcaagcaagctgatgctattgaccggtattactat
gagaacagcgatcaacctattgatttaactaagtccaaaaccaagcctcttgtttccagt
gtggctgactctgcctcatcccctctgagggagagtgccctgctggatatttctgatatg
gtgaagaacctcacagggcgtttgacacccaagtcttcaactccctctaccgtgtcagag
aagtctgatgctgatggaagcagttttgaggaagctctggatgaactgtcaccagtacac
aagaggaagggcaggcagtccaactggaaccctcagcatcttctgatccttcaggcccag
tttgcttccagcttgagggagaccccagaaggcaaatacattatgtcggacctaggtcca
caagagcgggtacacatctctaagtttactggtctttccatgaccacaattagccactgg
ctggccaatgtgaagtatcagttaaggaggacaggtggaactaaatttttaaagaacttg
gacacaggacatcctgttttcttttgcaatgattgtgcctctcagttcaggactgcttct
acatacataagtcacttagagacacacctagggtttagtttgaaggatctgtcaaagttg
ccacttaatcagattcaagaacagcagaatgtttcaaaagtcctcacaaacaagactttg
ggctcacttggaattgccgaggaggacttaggctccacattccaatgtaagctctgtaac
cgaacttttgcaagcaagcatgcagtcaaactgcaccttagtaaaacacatggcaagtcc
ccagaggaccatctgatctatgtaactgagttagaaaaacaatag
DBGET
integrated database retrieval system
