Hirundo rustica (Barn swallow): 120763166
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Entry
120763166 CDS
T09369
Symbol
MATN1
Name
(RefSeq) cartilage matrix protein
KO
K19467
matrilin
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
120763166 (MATN1)
Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
120763166 (MATN1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
FXa_inhibition
cEGF
EGF_CA
EGF_LRP2
EGF
Motif
Other DBs
NCBI-GeneID:
120763166
NCBI-ProteinID:
XP_039942231
LinkDB
All DBs
Position
25:5912697..5935178
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AA seq
493 aa
AA seq
DB search
MARICCALLLSLLLLLHSRGAGGASPQPRGALCRTKPTDLVFIIDSSRSVRPHEFEKIKV
FVSRVIEALDVGPNATRVGVINYASAVRSELSLQGPQSKAALLQAVRRIQPLSTGTMTGL
AIQFAISRAFSAAEGGRDGAPSFKKVAIVVTDGRPQDGVQDVSARARAAGIELFAIGVGR
VDMGTLRQMASEPLDEHVDYVESYSVIEKLTHKFQEAFCVVSDLCATGDHDCEQVCVSSP
GTYRCACRDGFSLNSDGKTCTACNGGLGSALDLVFLIDGSKSVRPENFELVKKFINQIVD
SLEVSDKQAQVGLVQYSSSVRQEFPLGQFKSKKDIKAAVKKMSYMEKGTMTGQALKYLVD
SSFSVINGARPSVPKVGIVFTDGRSQDYISDAAKKAKDSGFRMFAVGVGNAVEDELREIA
SEPVAEHYFYSADFRTISKIGKKLQMKICVEEDPCECKSIVKFQTKVEDLINSLQQKLEA
VAKRIEALENKII
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggccaggatctgctgtgccctgctgctctcgctgctgctgctcctgcacagccggggc
gccggcggggcctctccgcagccccgcggcgccctgtgcaggaccaagcccacggacctg
gtgttcatcatcgacagctcgcgcagcgtgcggccgcacgagttcgagaagatcaaagtg
ttcgtgtcgcgcgtgatcgaggcgctggacgtggggcccaacgccacgcgcgtgggcgtc
atcaactacgccagcgccgtgcgcagcgagctgtccctgcagggcccccagagcaaggcg
gccctgctgcaggccgtgcgcaggatccagccgctctccacgggcaccatgaccggcctg
gccatccagttcgccatcagccgcgccttcagcgccgccgagggcggcagggacggcgcg
cccagcttcaaaaaggtggccatcgtggtgaccgacggccggccgcaggacggggtgcag
gacgtgtctgcccgggccagggccgcgggcatcgagctcttcgccatcggcgtgggcagg
gtggacatgggcacgctgaggcagatggccagcgagcccctggacgagcacgtggactac
gtggagagctacagcgtcatcgagaagctgacccacaagttccaggaggctttctgtgtg
gtgtcggacctgtgcgccacgggggaccacgactgcgagcaggtgtgtgtcagcagcccg
gggacgtacaggtgcgcctgcagggacggcttcagcctcaacagcgacggcaagacctgc
accgcttgcaatggtggcttggggtctgctctggatctcgtgttcctcatcgatggctcc
aagagtgtgaggcctgagaacttcgagctggtgaagaaattcatcaaccaaatcgtggat
tctctggaggtgtcggacaaacaggcccaggtggggctggtgcagtactccagctctgtc
cggcaggagttcccgctggggcagttcaagagcaagaaggacatcaaagcagcggtgaag
aaaatgtcctacatggagaaggggaccatgacaggccaggctctgaagtacctcgttgac
agctccttttccgtcatcaacggggcccggcccagcgtccccaaggtggggattgtcttc
acggatgggcgctcacaggattacatctcagatgctgccaagaaagccaaggactcagga
ttccggatgtttgccgtgggagtcggcaacgccgtggaggatgagctgagggagatcgcc
tcagaaccagtggctgagcattatttctacagcgccgacttcaggaccatcagcaagatc
gggaagaagctgcagatgaagatctgtgttgaggaagatccgtgtgagtgcaaatccatc
gtgaagttccagaccaaagtagaagacctcatcaattccctgcagcagaaactggaagct
gtggccaaaaggatcgaagccctggagaacaagatcatctaa
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