Hirundo rustica (Barn swallow): 120763293
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Entry
120763293 CDS
T09369
Symbol
CILP2
Name
(RefSeq) LOW QUALITY PROTEIN: cartilage intermediate layer protein 2
KO
K24436
cartilage intermediate layer protein
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
120763293 (CILP2)
Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
120763293 (CILP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
TSP_1
CarboxypepD_reg
Ig_2
I-set
TSP1_CFP_C
TSP1_spondin
CarbopepD_reg_2
ig
Motif
Other DBs
NCBI-GeneID:
120763293
NCBI-ProteinID:
XP_039942407
LinkDB
All DBs
Position
26:complement(6444..12987)
Genome browser
AA seq
1250 aa
AA seq
DB search
MARLAHLAQLAHLAQLAVLVLLVVGAPRVAGAAEPLENESEPGKAGAAGKPWKGEPDLEE
LDLGTAGKGAAWTSWFNIDHPGGDGDHESLAAIRFYFGDRVCARPLALEARSTGWELPAA
LGQVVHASPERGFRCLHREQPPGKACANYHVRFLCPLDDVYWSHWSAWSPCSRSACGSRG
VQSRSRRCRSARARSRLKELRCRGKATERRACSAGPCPEPSWTEWGAWGPCSRTCGGSGT
RSRRRSCKPAKRSPPCPGRATEAQECHPPPCPGDPGRVPAAGCALRGTVVTAAGAALPDA
RLYLENRPGEPLARSDSRGRFTAPGLCPGPAANLSAHRDGFAPALAPIVTDGSGAAVAHL
RLRRLEKPHMVLHPADRVREAGQDVTFCCEASGTPAPQNYSWYHNGTLLAPGPGGRLELR
ALAPEQAGTYRCKATSEAGAILSEPAQLTVLAQGRPSCRAEPEPSLVELPSDCSQDAGGS
RYYNVGRCPASPCPGGSAEPSACGEESGRCCGVRRMELRQVPCAGSLLPVKVVAECGCGP
CARPRALVQGRVTAADTGEPLRFGRIFLGGRRAGFTGYQGSFTIEVPPDTRRLVARFVDG
QQRLLDAVRVLPFDRRGGAVYQEVKMLRKKEPVELDGGRSNAIPLGEAGGREPVGELLLP
AGAFLRPSGEVFNGTVKASVTFVDPRDVGTAGAASSDLSFADADGEIAPLRTYGMFAVDF
REGDSGAELQAGPVRVRMDAGQVRMPEHLGKMKLWSLNPESGLWEEEGVLRAAGGGRRKR
KRKREERTFLVGNLEIRERRLFNLDVPEDRRCFVKVRAYSNEKFNPHEQLEGVVVTLVNL
EPQPGFPSNPRAWGRFDSAVTGPNGACLPAFCDGRRPDAYAALLTATLGGEELEAVASSP
KLNPGAVGVAQPYLGKLGYRRSDHEDAALKKTAFQINVAKPDPGDPDESNGPVYSYRSLR
ECQEAPVSANHLRFYRVEVDRYEYNVVPFKESDVSSWTGDYLAWWPNPQEFRACFIKVRL
EGPQEYMVRSRNAGGSHPRTRGQLYGLRDSRSVRDPLLDNTSGACVEFKCGGMLFDQGLA
DRTLVTVVPQGGCRRTATNALLRDYLSRHXPLADNNHTAAFSMLAPLDPLGHNYGIYTVT
DQSPRLAKEIAIGRCFAGTSDGFSREMRAAEGAAVTFSCQERPPGSESLFQRLLNAPAEA
LQEIRREMGRSELRRAPPEVMDFASGAPGPTAARRSPGGQQRPGGQRGRP
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggcacggctggcacatctggcacagctggcacatctggcacagctggcggtgctggtg
ctgctggtggtgggagctccgagggttgccggggctgcagagcccctggagaacgagtcg
gagccgggcaaggccggagccgccgggaaaccctggaaaggcgagcccgacctggaggag
ctggacctgggcacggcaggcaaaggcgccgcgtggacgtcgtggttcaacatcgaccac
cccggcggggacggggaccacgagagcctggccgccatccgcttctacttcggggatcgc
gtgtgtgcgcggccgctggcgctggaggcgcggagcacgggctgggagctgccggcggcg
ctgggacaggtggtgcacgccagccccgagcgcggcttccgctgcctgcaccgcgagcag
ccgcccggaaaggcctgcgccaactaccacgtgcgcttcctgtgcccgctggatgacgtg
tactggtcccactggtctgcctggagcccctgctctcgcagcgcctgcggctcccgcggc
gtccagagccgctcccggcgctgccgcagcgcccgcgcccggagccgcctcaaggagctg
cggtgccggggcaaagccaccgagcgccgggcctgcagcgccgggccctgcccagagccc
tcctggaccgagtggggcgcttggggtccgtgctcccgcacctgcggcggctccgggacc
cgctcccggcgccggagctgcaaacccgccaagaggagccccccgtgcccgggccgtgcc
accgaggcgcaggagtgtcacccgccaccctgccccggtgaccccggccgcgtccccgcc
gcgggctgcgcgctgcggggcaccgtggtgacggcggccggggcggccctgcccgacgcc
cgcctgtacctggagaaccgcccgggcgagcccctggcccgcagcgactcccgggggcga
ttcacggccccggggctgtgcccgggccccgccgccaacctcagcgcccaccgcgacggc
ttcgccccggcgctggcgcccatcgtcaccgacggctcgggagcggccgtggcgcacctg
aggctgcggcggctcgagaagccccacatggtgctgcaccccgcggacagggtcagggag
gccgggcaggacgtgaccttctgctgcgaagcctcgggcacccccgcgccccaaaactac
tcctggtaccacaacgggacgctgctggctccgggccccggcggccgcctggagctgcgg
gcgctggcgccggagcaggcgggcacctaccgctgcaaagccacctccgaggccggagcc
atcctctcggagcccgcgcagctcaccgtgctggcccagggccggccgagctgccgggcg
gagcccgagcccagcctggtggagctgcccagcgactgctcgcaggacgccggcggctcc
cgctactacaacgtggggcgctgcccggcctcgccgtgcccgggaggctccgccgagccc
tcggcgtgcggcgaggagtccgggcggtgctgcggggtgaggaggatggagctgcggcag
gtgccgtgcgccggctccctgctgcccgtcaaggtggtggccgagtgcggctgcgggccc
tgcgcccggccccgggcgctggtgcagggccgggtgacggcggccgacaccggggagccg
ctgcgcttcggccgcatcttcctcggcggcaggagagccggcttcaccggctaccagggc
tccttcaccatcgaggtgccgccggacacgcggcgcctggtggctcgcttcgtggacggg
cagcagcgcctgctggacgccgtcagggtgctgcccttcgaccggcggggaggagccgtg
taccaggaggtgaagatgctgcgcaagaaggagccggtggagctggacggcggccggagc
aacgccatccccctgggagaggccggcggccgggagcccgtcggggagctgctgctgccg
gccggagccttcctccggccgtccggggaggttttcaacggcaccgtcaaggccagcgtc
accttcgtggaccccagggacgtgggcacggccggcgccgcctccagcgacctgagcttc
gccgacgccgacggggagatcgcgcccctgcgcacctacgggatgttcgccgtggatttc
cgcgagggcgacagcggcgcggagctgcaggcggggccggtgcgggtgaggatggacgcc
gggcaggtgcggatgccggagcacctgggcaagatgaagctgtggtccttgaaccccgag
agcggcctgtgggaggaggaaggcgtcctgcgggcggccgggggcggccggaggaagagg
aagaggaagagggaggagaggaccttcctggtgggcaacctggagatccgcgagcgccgc
ctcttcaacctggacgtgcccgaggaccgccgctgcttcgtcaaggtcagggcctacagc
aacgagaagttcaacccccacgagcagctggagggggtggtggtcaccctcgtcaacctg
gagccgcagcccggcttccccagcaacccgcgggcctggggccgcttcgacagcgccgtc
acggggcccaacggcgcctgcctgcccgccttctgcgacggccggcgccccgacgcctac
gcggcgctgctgaccgccacgctgggcggcgaggagctggaggccgtggcctccagcccc
aagctgaaccccggcgccgtgggcgtggcgcagccctacctgggcaagctgggctaccgg
cgctcggaccacgaggacgcggcgctcaagaagacggccttccagatcaacgtggccaag
cccgaccccggcgacccggacgagagcaacgggcccgtctactcctaccggagcctgcgg
gagtgccaggaggcgccggtcagcgccaaccacctgcgcttctaccgcgtggaggtggac
aggtacgagtacaacgtggtgcccttcaaggagagcgacgtctcctcctggaccggcgac
tacctggcgtggtggcccaacccgcaggagttccgggcgtgcttcatcaaggtgcggctg
gaggggccgcaggagtacatggtgaggtcgaggaacgcgggcgggagccacccccgcacc
cgggggcagctctacgggctgcgggacagccgcagcgtgcgggacccgctgctggacaac
acctcgggggcctgcgtggagttcaagtgcggcgggatgctcttcgaccagggcctggcc
gacagaacgctggtgaccgtggtgccgcagggcggctgccgccgcacggccaccaacgcg
ctgctgcgggactacctgagccggcacncgccgctggccgacaacaaccacaccgcggcc
ttctccatgctggccccgctggacccgctgggccacaactacggcatctacaccgtgacg
gaccagagcccgcggctggccaaggagatcgccatcggccgctgcttcgcgggcacctcg
gacggcttctcccgggagatgagggctgcggagggcgcggccgtcaccttcagctgccag
gagcggccgccgggcagcgagagcctcttccagcgcctgctgaacgctccggccgaggcg
ctgcaggagatccgcagggagatggggcggtccgagctgcgccgcgctccgcccgaggtg
atggacttcgcctccggagcccccggccccacggccgcccgccggagccccggaggccag
cagagaccgggcgggcagcgggggcggccctga
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