KEGG   Hirundo rustica (Barn swallow): 120763372
Entry
120763372         CDS       T09369                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
hrt  Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:hrt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hrt03036]
    120763372 (KDM4B)
Enzymes [BR:hrt01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     120763372 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     120763372 (KDM4B)
Chromosome and associated proteins [BR:hrt03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    120763372 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C DUF7141 Tudor_3 DUF4537
Other DBs
NCBI-GeneID: 120763372
NCBI-ProteinID: XP_039942550
LinkDB
Position
26:1081480..1154192
AA seq 1087 aa
MTGTMGSENPSPQNPGCKIMTFRPSLEEFRDFGRFIAYMESQGAHRAGLAKVIPPKEWKP
RQTYDDIDDMVIPAPIQQVVTGQSGLFTQYNIQKKPMTVGEYRRLANSEKYCTPRHQDFE
DLERKYWKNLTFVSPIYGADISGSLYDADVDEWNIGNLNTLLDMVEHECGIIIEGVNTPY
LYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCD
AFLRHKMTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLR
WIDYGKMATQCTCRKDMVKISMDVFVRVLQPERYELWKQGKDIAVLDHMKPTALSSPELD
AWNETKADLKAKLLRRIGDEEEDNKHRSHRKRSQPRRHKTEDQKSLGDVMAIETALEDVK
VKEELKRGPDLEEEERSKGLEGEAGDCKAKARPPKAKGERKKKQPFPAQPPAPPQPPEAP
ARPPGPGAAPAVAQARPPAPLNVVQPSEAPAEEDEFKPRPIIPMLYVVPRSKKVVFDKEH
MSCQQAFEQFATQKGLGWPQGPLQSPAKDEDGAEAERAELGAEAASAFSKMKMEIKKSRR
HPLGKPPTRSPLSVVKQETSSDEETFPFSGEEDMSDPEALKSLLSFQWKNKAFNFPAERK
FNAAAALSEPYCAVCTLFYPYNQSSQVEKEAAPASTGEPSSFLHLSRCGQKTKPLIPEMC
FTSSGENTEPLPSNSYIGEDGTSPLISCAKCCLQVHASCYGIRPELVNESWWCSRCSAGA
WAAECCLCNLRGGALQMTTDGRWVHVICAIAVPEARFLNVIERHPVDISAIPEQRWRLRC
VYCRKRMKKVSGACVQCSYEHCSTSFHVTCAHAAGVPMEPDDWPYVVSITCFKHKAANHS
VPFRREVALGQTVITKNRNGLYYRCRVIGTSTQTFYEVNFDDGSYSDNVYPESIISRDCL
QLGPPLEGELVQLQWTDGIIYKAKFIAAQISQIYQVEFEDGSQLMVKRGDIYTLEEELPK
RVKSRLSLSTGAPQEDVFSGDEVRAAKRPRLGNPRNPEEYGQTPDYLAFMESLLQTQYQP
GTQSNMF
NT seq 3264 nt   +upstreamnt  +downstreamnt
atgactggaactatggggtcggaaaacccgagcccgcagaaccctggctgcaagatcatg
accttccgtccatcgctggaggagttccgcgatttcgggaggttcatcgcctacatggag
tcccagggagcccacagggccgggctggccaaggtgatcccccccaaggagtggaagccg
cggcagacgtacgatgacatcgatgacatggtgatcccggcccccatccagcaggtggtc
acgggccagtcggggctcttcacccagtacaacatccagaagaagcccatgaccgtgggc
gagtaccggcgcctggccaacagcgagaagtactgcacccctcggcaccaggacttcgag
gacctggagcgcaagtactggaagaacctgaccttcgtgtctcccatttatggggctgat
atcagcggctccctgtacgacgcagacgtggatgagtggaacattggcaacctgaacacc
ctcctggacatggtggaacacgagtgtggcatcatcatcgagggggtgaacacgccctac
ctctactttggcatgtggaagacaacttttgcttggcatacagaggacatggatctctac
agcatcaactacttgcattttggggagcccaaatcctggtacgccattcccccggagcac
ggcaagcggctggagcgcctggccaaaggatttttcccggggagctctcagggatgcgat
gctttcctccgtcacaagatgaccctcatttctccctccatcctgaagaaatacgggatt
ccctttgacaggatcacccaggaagctggggagttcatgatcacgtttccttacggttac
cacgctggcttcaaccacggcttcaactgcgccgagtccaccaacttcgccactctgcgc
tggatcgactacgggaaaatggcaacacagtgcacgtgccgcaaggacatggtgaagatc
tccatggacgtgtttgtgagggtgctgcagcccgagcgctacgagctctggaagcagggc
aaggacatcgctgtcctggaccacatgaagcccacggccctgagcagccccgagctggac
gcctggaacgagaccaaggcagacctgaaggcgaagctgctgcgcaggataggagatgag
gaagaggacaacaaacaccggtctcacagaaaaaggagtcaacccagaagacacaaaaca
gaggatcagaagtctcttggggatgtcatggctattgaaactgctttggaagatgtgaaa
gtaaaagaggagctgaaaagggggccggatctggaggaagaggagagaagcaaagggctg
gagggagaagcaggggactgcaaggccaaggcgcggcccccgaaggccaagggcgagagg
aagaagaagcagccgttccccgctcagcccccggcccctccgcagccccccgaggccccg
gcgcggcccccggggcccggggcagccccggccgtggcgcaggcccggcccccggccccg
ctcaacgtggtgcagccctcggaggcgccggccgaggaggacgaattcaagccgcggccc
atcatccccatgctgtacgtggtgccccgcagcaagaaggtggtgttcgacaaggagcac
atgtcctgccagcaggccttcgagcagttcgccacgcagaaggggctgggctggccgcag
ggcccgctccagagccccgccaaggacgaggacggcgccgaggccgagcgcgcggagctc
ggcgctgaggctgcttctgccttctccaagatgaagatggagatcaagaagagccgccgg
cacccgctgggcaagcccccgacgcgctccccgctgtccgtggtcaaacaggagacctcg
agtgacgaggaaacgtttccattttctggagaggaagatatgagtgatccagaggctttg
aaatctttactttccttccagtggaagaacaaagcatttaatttcccagctgaaaggaag
ttcaatgcagctgctgccctgagcgagccatactgtgctgtctgcaccctcttctacccc
tataaccagtcctcacaggtggagaaggaagctgcccctgcctccacaggggagccatcc
tcgttcctgcacctttccaggtgtgggcagaagaccaagcccctgatcccggagatgtgc
tttacctcaagtggagaaaacaccgagccccttccttccaattcctacattggagaggat
ggaaccagtcccttgatatcctgtgccaaatgctgcctgcaggttcatgctagctgttac
gggattcgcccggagctggtgaacgagagctggtggtgctcgcggtgctcggccggcgcg
tgggcagcggagtgctgcctgtgcaatctcaggggaggagctctccagatgaccactgat
ggccggtgggtccacgtgatctgtgcaatcgctgtcccggaggcgcgtttcctcaatgtc
atagagcgtcatcctgtggacatcagcgctatccccgagcagaggtggagactgaggtgt
gtgtactgcaggaagaggatgaagaaggtgtcgggggcctgcgtgcagtgctcctacgag
cactgctccacgtccttccacgtgacgtgcgcgcacgcggccggcgtgcccatggagccc
gacgactggccctacgtcgtgtccatcacctgcttcaagcacaaagcagcaaaccacagc
gtcccgttccggagggaggtggccctggggcagacggtgatcaccaagaacaggaacggg
ctctactatcgctgcagggtcatcggcaccagcacccagaccttctacgaagtgaacttc
gacgatggctcctacagcgacaacgtttaccccgagagcatcattagcagggattgcctc
cagctggggcctcctctggagggggagctggtgcagctgcagtggacggacgggatcatc
tacaaggccaagttcattgcagcgcagatcagtcagatttaccaggtggagtttgaggat
ggctctcagctcatggtgaagcgtggggatatttataccttggaggaagagcttcccaag
agagtcaagtctcgcctgtccctcagcactggggcccctcaggaagatgtattttcgggc
gatgaagtgagagcagccaagcgtccccggctggggaatccaagaaatcctgaagaatat
ggacaaaccccagattacctggcctttatggagagcctgctgcagacacagtaccagcct
gggactcagagcaacatgttttaa

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