Hirundo rustica (Barn swallow): 120763415
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Entry
120763415 CDS
T09369
Symbol
POP1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1 isoform X1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120763415 (POP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hrt03009
]
120763415 (POP1)
03016 Transfer RNA biogenesis [BR:
hrt03016
]
120763415 (POP1)
03029 Mitochondrial biogenesis [BR:
hrt03029
]
120763415 (POP1)
Enzymes [BR:
hrt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
120763415 (POP1)
Ribosome biogenesis [BR:
hrt03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
120763415 (POP1)
Transfer RNA biogenesis [BR:
hrt03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
120763415 (POP1)
Mitochondrial biogenesis [BR:
hrt03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
120763415 (POP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Motif
Other DBs
NCBI-GeneID:
120763415
NCBI-ProteinID:
XP_039942638
LinkDB
All DBs
Position
1:complement(22374054..22395709)
Genome browser
AA seq
1007 aa
AA seq
DB search
MSGAREKKRAKKMRNQPASVTLPAEPGPFAGGGSRACPPPGDVHSEQQQKFSNQSSGSSY
RKDQYFSKGQNRGERGRARGGWQGGHQSVPEEMPKYITVSTFAQARAAEINAMLKAVSQK
SSNSLVFQTLPRHMRRRAMSHNVKRLPRRLQEMARKEAEKAVHQKKEQSKTKCRKARRRH
INLVAEFNHRQRKNIWLETHIWHAKRFHMVKKWGYCLGNSPTEKSYRACYRAMTKHCLLQ
DLSYYCCLELKGKENELLKQLARICSIDTGLTFQEGCCLSGRFEGSLHLYRADRYPEDML
GPVTFIWKPRDGSENRQLWIWVHPALKQDILRELKAIFQCSEPEEMCIAEPVTTSIQEEK
QAEVVRSLGNKRKKEDKEGEKAVPVKKIIGDGTRDPFQAYSWIARTTGIVISDRSMEILR
YRLIGPLSHSVLTETLKAASVQTEMADSETELNNWWVENCKDSEKVSLHQCQSSIFELLE
GMSSPSDMPPGTILGLTVGDPRVNLPKKKTKAMPDFEKYQDNDKIRQLYLKGVPADCAHS
FIWDHDICKNVTENKISEQDLNHMRAQLLVPGSHLDLGPCESKIPILLVQQPGKVAGEDR
PGWGSGWDIYLPKGWGMAFWIPFVYRGVRVGGLQEALKHSEYQRTPHTPNDFPDCQAGMQ
FAKELETSLLEKFKRRPPAKRANYVKLGTLSPFICPWGQLTKNWEGRMKASGGFLCPSSP
HPDYCTTEGQTLCDPKAEAVRGASPKTGEAEETMEITSPEGALKAEDVKSTQDFGEGDEA
KTSDFVVLRSEKLLMQLSAWCYPTAGKDRRIRLISRLGQKEMTEDVFLPILMSYPRALVW
VNLSLLRKGNPELHAMICIPTEDDLLHLSKDKLFCGPQEPKHRDIFKDKVQKQKEKKKKK
KDNVKSLESDPAGIPVEEATEDHEDLILGLWSDVLPDVTSHCSRTVLGYVTRGDFSLATG
CGEALGFVSLTGLIYMLHNQPADKKGLVLLRTPASLQYRFARLNIEV
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggcgcgggagaagaagcgagccaagaagatgaggaaccagccggctagcgtc
acgctgcccgcagagccggggcccttcgccggcggcgggagcagagcctgcccgccccca
ggagatgttcattctgagcagcagcagaaattttcaaatcagtcatctgggtcttcttac
aggaaagaccaatatttttcaaaggggcaaaatagaggagagagaggcagagcaagaggg
ggatggcaaggaggacaccagagtgtacctgaggaaatgccaaaatacataacagtgtct
acctttgctcaagctcgtgctgctgagatcaatgccatgctgaaagcggtttcgcagaag
tcttccaactctctggttttccagacgctgcctaggcacatgcgaaggcgagcaatgagt
cacaatgttaaacgcctccccaggcggctccaagagatggccaggaaagaggcagagaaa
gctgtgcatcagaaaaaagaacagtcaaagactaaatgccgcaaagctagaagacgccac
ataaatttggtagccgagtttaatcacaggcaaagaaagaatatttggctggaaacccat
atttggcatgcaaagagatttcatatggtaaagaaatggggatactgtttaggaaacagc
cctacagagaagagctacagggcttgttaccgagccatgacaaagcactgtcttcttcag
gacttatcgtattattgttgcctggagttgaagggcaaagagaatgagcttctgaagcaa
cttgctcgaatatgtagcattgacacaggattaacatttcaagagggttgttgtctgtct
ggaagattcgagggctccctgcatctttacagagcagatcgctatcctgaggatatgctt
ggtcctgttacatttatttggaaacccagggatgggtctgaaaacagacagttgtggatc
tgggtgcatccagctctcaagcaggacatactgagggagttaaaagcaatttttcagtgt
tcagagcctgaagaaatgtgtattgctgagcctgttacaacatcaattcaagaggaaaaa
caagcggaagtcgttaggagtcttggcaataaaagaaagaaagaggataaagaaggagaa
aaagctgtgccagtgaaaaaaataattggtgacggcactagagatccattccaggcctac
tcttggattgcacggactactggcattgtaatcagtgacagaagcatggagattctcaga
taccgcctgatcggcccattatcacactccgtccttacagagaccctgaaagcagcttct
gtccaaacagagatggcagattcagagacagaactgaataactggtgggtagaaaactgc
aaggactctgaaaaagtatctcttcatcaatgtcaaagttctatctttgagctattggaa
gggatgagctcaccatcagatatgccgccaggtacaatacttggcctcactgttggagat
cctcgagtcaatttgccaaaaaagaagacaaaagccatgccagactttgaaaaataccaa
gataatgataaaattaggcagctgtatctgaagggtgtacctgcagactgtgctcacagc
tttatctgggaccacgacatctgtaagaacgtcaccgaaaataaaatctcagagcaggat
ttaaaccatatgagagctcagttactcgtacctggatcacaccttgatttgggtccttgt
gaatccaagattcccatactgttggtgcagcagccagggaaagtggctggagaagatcga
ccaggatgggggagtggctgggatatctatcttccaaagggctggggcatggctttctgg
attccttttgtatatcgaggtgtacgagtcggtggcttgcaagaggcattaaagcattct
gaataccagagaacaccccacactccaaatgattttccagactgccaggcaggaatgcag
tttgccaaagaactggaaaccagtcttcttgaaaaattcaaacgacgtccacctgcaaaa
agggcaaattatgtcaagctgggcactctgtctcctttcatctgtccttgggggcagctg
accaagaactgggaaggaagaatgaaagcttcaggaggatttttatgtccttcttcccca
caccctgactactgcacaactgaaggacagaccctttgtgaccccaaagcagaagcggtc
agaggagcttcccctaagactggtgaggcagaggagaccatggaaataacaagtcctgaa
ggtgccctaaaggcagaggatgttaaaagcacccaagattttggtgagggagatgaagct
aagacaagtgactttgttgttctcaggagtgagaaactactaatgcagttatcagcctgg
tgttaccccactgctgggaaagatcggcgaatccgcctcatctctcggctgggacagaag
gaaatgactgaagatgtttttttgccaatcttgatgagctacccaagggctctcgtctgg
gtcaacttgtcgctcttgagaaaggggaaccctgaattgcatgccatgatttgcatccca
acagaagatgacttgctgcatctaagcaaagacaaactcttctgtggtccgcaagaaccc
aaacatcgtgatatattcaaggacaaggtacagaagcaaaaagagaagaagaagaagaaa
aaggataatgtgaagtctctagagagtgaccctgcaggcattccagttgaagaagcaact
gaggaccatgaagacctcattcttggtctttggtcagatgttctcccagatgttacttcc
cactgctccaggactgtcttggggtatgtcactcgaggggatttttcattggctacaggc
tgtggagaagcactaggttttgttagcttgactgggttaatttatatgttacacaaccag
ccagcagataaaaaagggcttgttttgttaaggactccagcatctttacagtacagattt
gcaagacttaatattgaggtttaa
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