Hirundo rustica (Barn swallow): 120763429
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Entry
120763429 CDS
T09369
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120763429 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrt03021
]
120763429 (TAF4B)
03036 Chromosome and associated proteins [BR:
hrt03036
]
120763429 (TAF4B)
Transcription machinery [BR:
hrt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120763429 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
120763429 (TAF4B)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
120763429 (TAF4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
120763429
NCBI-ProteinID:
XP_039942657
LinkDB
All DBs
Position
1:complement(46490031..46563092)
Genome browser
AA seq
752 aa
AA seq
DB search
MASKGPPAAALQLPANLQLPPGTVLIRSSNGHLMLVSQQAIAGAQKQTQNNTSVRPSVPT
STPAIRICALQNSGTQLVKKIAAAPVKTLSQTTNAVVSTVQTPAVIQPAAATASVTAVTA
VKPLSTGTPVKLPVTGPPAQAISQKAVSVKAEGTTVAQTSASTEMLENVKKCKNFLATLI
KLASSGPQAPEMGQNVKNLVQNLLEAKIEPEEFTKKLYIELKSSPQPYLVPFLKKSVLAL
RQLMPNPQSFIQQCMEQPAPIQEVVSTRTSAVPAPPTAATTALPAVKPVPASVAVSAPLV
VAPVLAGTSAAPPLPALKAVPSPAAATASLGPAAPVLPTTVASSGPTAVQPGKLVFTSTV
PKAPLQPAKPVLVSTAASSAATPLQPLKPVVRAPVGIKISQPSSMASQSVVKVKQLVVQQ
PLGTIVKQVSTLPQPSVLTLQTPAEKKMPLNTLVQTNQLPAGSILKQITLPRNKILSLQA
SPVQKVKIKENGATSFRDEDDLNDVTSMAGVNLNEENARILAANSELVGTVIHSCSEEPF
LSLEALQSKILNIGKRHDIMELNSDVVNLISCATQERLRGLLEKLTVIARHRISTHKGSD
KYIICSDTRAQLRFLEKLDHLEKQRKDEEEREMLLRAAKSRSNKEDPEQLRLKQKAKEMQ
QLELAQVQQREANLTALAAIGPRKKRPLDSSNVGSGLEGLNGTGIAGSSGFSLTKQILCP
RVTRVCLRDLIFCMEQEREMKHSLHLYRALLK
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaaggggccgcccgcggccgccctccagttgccggccaacttgcagctgccc
ccaggaactgttcttatcagaagcagtaatggccacctaatgctggtatctcaacaggca
atagcaggagcccagaaacagacacaaaataacacaagtgtgagaccatctgtgccgacc
agcacacctgcaatcagaatatgtgctctgcagaattctggcacacagttagtaaagaaa
atagcagctgctcctgtgaaaacgttatctcaaacaacaaatgctgtggtttctactgtt
cagacacctgctgtaatacagccagcagctgcaacagctagtgttacggcagttactgct
gtaaagcctttgagtactggaacacctgtaaaacttccagttacaggaccacctgcacaa
gctatctcccaaaaggcagtctctgtgaaagcagagggcacaacagtagcacagaccagc
gcttctacagagatgctagagaatgtgaagaaatgcaagaattttcttgctacgctaata
aaattggcatctagtggacctcaagcccctgagatggggcagaatgtgaagaatctggtg
caaaatctactggaagcaaaaattgaaccagaagaatttacaaaaaagctgtacatagaa
cttaagtcatccccacaaccatatttagttccttttctcaagaaaagcgtgcttgcctta
cggcaactaatgcctaatcctcagagcttcatccagcagtgtatggagcagccagctcca
atccaagaagtggtttcgactcgtacctctgcagtccctgcccctccgacagcagcaaca
accgctcttccagctgtgaaacccgtgcctgcctctgtagcagtctcagcccctctagtt
gtcgcgccagtccttgccggcacgtcggcagcacctcctctgccggcactgaaggccgtt
ccttcccctgcggcggcgacggcgtcgctcgggcccgcagctcccgtcctccccacgacc
gtggcgtcgtccgggccgaccgctgtccagcctggcaagctggtcttcacctccacggtg
ccaaaggcccctctgcagcctgcaaagccagtgctggtctccacggcggcgtcttcggcg
gcaaccccgctccagcctctgaaaccggtcgttcgagccccagttggtattaaaatctcg
cagcccagctccatggcgtcgcagtcagtggttaaagtgaaacagctggtagttcaacaa
ccattgggaaccattgtcaagcaagtatccacgctcccacagccctcagtgctcaccctg
cagacacctgctgagaagaagatgccgctgaacacgcttgttcaaaccaaccagcttcct
gcaggttccattctgaagcaaattaccttgccaagaaataaaattctgtcgcttcaagca
tctcctgttcagaaagtgaaaataaaagagaatggagcaacatccttcagagatgaagat
gacctgaatgatgtgacttctatggctggggttaatctgaatgaggagaatgcgcgcatt
ttggcagcaaactctgagctcgttggtacagtgattcactcttgctcagaggaacccttt
ctgtctttggaagctcttcagagtaaaatcctgaacataggtaaaaggcatgacattatg
gaacttaactctgatgttgtgaacttgatctcctgcgctacacaggagagattacgaggg
ctcctagaaaaactaactgtaattgctcggcacagaatatcaacccacaaggggagtgat
aagtacatcatctgtagtgacaccagagcacagctgaggtttcttgagaagcttgatcac
ttagaaaagcagagaaaagatgaagaggaacgtgaaatgttgcttcgagcagccaagagc
cgttccaataaagaagatccagagcaactgcggttaaagcagaaggcaaaagagatgcaa
cagttggaattagcgcaggtgcaacaaagagaagccaacctcacagctttggcagccatt
ggaccaaggaagaaaagaccattggattcatcaaacgttggatctgggctcgagggtttg
aacggcactggaattgctggatcatcaggtttcagcctcacgaagcagattctctgtcca
agagtaacccgtgtttgtctcagggacttgatattctgcatggaacaagagagggagatg
aagcattctctgcacttgtaccgtgctcttctgaagtga
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