Hirundo rustica (Barn swallow): 120763503
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Entry
120763503 CDS
T09369
Symbol
REXO1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120763503 (REXO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hrt03009
]
120763503 (REXO1)
Ribosome biogenesis [BR:
hrt03009
]
Eukaryotic type
Pre-60S particles
RNases
120763503 (REXO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
120763503
NCBI-ProteinID:
XP_039942823
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Position
26:4044987..4087938
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AA seq
1231 aa
AA seq
DB search
MLRSTGYFRGIDCPFLNAGGSGPGRGCRRPYCHFRHPPVAPAPCGASGASGDPSVGLQLG
RGAERGYDPYNPDLPRPSLEAEDGTLADITDVTPGILELELVNKAIEAVKNEVEREQKKY
EELLETTKEFGASEGSSLISNTPVSATGPQNDSFASLEYNPGSYNFSNNSDYNPTPLAAA
GRSSKYTLDSSRSKGSSLEYVPKAVVQNKKYSSTVTNNKYVIDDSKPSTDLEYDPLSNYS
ARLLGKATTKGSKRERAADYEDSYSPSRKKLCEDPDDDEVLARFSSSEDEAEVEYKTASG
SSPSKAGSESESNNEISSKGQSTKVDGSASQKSKEAAPHREELPNSQKNLGKNSADKNSK
AAKLCSGKSNTEIENKNKDSKDKTKKKKTDVSKTPGLSEAGKKEKNKNADKDKVLKKEEK
LKTKNEEKNSKDKSIKVKTDGNLKKPEKQKSEKVDGCKKEKSKSTASSSGKSKSEGVTKG
SEKVGSSKKESQSKTADGKNGKESSGHKNKEKGTKTSLERKKDKVSSGGQGEPKKGRKQR
SLSHVDLFGDESGDEDDKGRPLSSSLLDVSSDLDGADSGSASESDKDRTKKVKRSKLSRS
SSSSSTSDDIDYSILEKDVDFESDPMEECLRIFNESKDVKTEDKGRLGKQPSKEEANEEK
TEDNLTTLFPGQKRRISHLVKQGNAEAPSKPVVRPYRPPTAQEVCYQRIQLAQQQAAQLV
GAVQKTSLCLPGEKRRIAHVPNAALTAAAKQSLGSSKATLGGRSVTPSNDSEAPTLPLKP
CTLAGMASKTTSTIVPKRVAHVPSLQSTALQRPVIPTEFGAKVPTNIRQRYLNLFIDECL
KFCSSSQEAFDKALAEEKVAYERSTSRNIYLNVAVNTLKKLRSLVPNSPASTNKTSNKKV
VSHEAVLGGKLAAKTSFTLNRSGSLRAEDLTGAALYRRLKEYLMTEEQLKENGYPMPHPE
KAGRAVLFTAEEKKVIDSSCRICCRCGTEYMVSASGSCIRKEECVHHWGRLRKQRVPGGW
ETHYSCCSGAVGSPGCQVAKQHVHDGRKESLDGFVKTFEKLPTTDGYPGIYALDCEMCYT
KQGLELTRVTVINSELKVVYDTFVKPDSKVVDYNTRFSGVTEEDLENTSITLRDVQAVLL
NMFSADTILIGHSLESDLFALKLIHGTVVDTAIVFPHRLGLPYKRALRTLMADYLKRIIQ
DNVEGHDSSEDARACMELMVWKIKEDAKVKR
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgctcagatccaccggctactttcgcggcatcgactgcccattcctcaacgccgggggg
tcggggccgggccgggggtgccgcaggccctactgccacttccgtcaccccccggttgcc
ccggcgccgtgcggagcctccggagcctcgggcgaccccagcgtggggctccagctcgga
cgcggcgcagagcgaggctatgatccctacaaccctgatcttcccaggccctcgctggag
gccgaggatggcactctggctgacattaccgatgtcacacccgggatcctggagctggag
ctggtcaacaaggccatcgaggcagtgaagaacgaagtggagagggagcagaagaagtac
gaggagctgctggaaaccaccaaggagtttggtgcttcagagggctcctcactcatttca
aacacacccgtgtcagctactgggcctcagaatgattcctttgcctccttggagtataat
ccagggagctacaacttcagtaataactcagactacaaccccactcctctggctgctgct
ggccggtccagtaaatacactttggattcctcccgctccaaagggagctcgctggaatac
gtccccaaggctgtagtacagaataaaaaatacagcagcactgtcactaacaataaatat
gtgattgatgactccaagccttccacggacttggaatacgaccccctttccaattactct
gccaggctgttgggcaaagccacaaccaaggggtccaaaagggaaagggccgctgattac
gaggactcttactctccctcacggaagaagctctgtgaagatcccgatgatgacgaggtg
ttggccaggttctcctcctctgaggatgaggctgaggtggaatataaaacagcttctggt
agttcaccctcaaaagctggttctgagagtgagtcaaacaacgaaatctccagcaaaggg
cagagcacgaaagtggatggctctgcttcccagaagagcaaagaagcagcaccgcacagg
gaggaacttccaaattcacagaaaaaccttggcaagaactcagcagacaagaactcaaaa
gcagcgaagttgtgttccggtaagagcaacacggaaattgaaaataaaaacaaagactcc
aaagacaaaacaaaaaagaagaaaacagatgttagtaaaacaccaggcctcagtgaggct
gggaagaaggagaaaaataaaaatgcagacaaagacaaagtgctcaaaaaagaagaaaaa
ttaaaaaccaagaatgaagagaaaaacagcaaagacaaaagcatcaaagtgaaaacagat
gggaacttgaagaaacctgaaaaacagaagtcggaaaaagtggatgggtgtaagaaagag
aagtccaagtccaccgccagcagttcagggaaaagcaagagcgagggtgtcaccaagggc
tcagagaaagtggggagcagcaagaaggagtcacagagcaaaacagctgacgggaaaaat
ggcaaggaaagctctggtcataaaaacaaggagaaagggaccaagacctccctggagcgg
aagaaagacaaggtcagttctgggggacaaggagagccgaagaagggtcggaagcagcgg
agtttgagtcacgtcgacctgtttggagacgagagtggagatgaggatgacaaaggccga
cctttgtcctcctcgttacttgatgtgagctcggacttggatggggctgactctggctca
gcctctgagagcgacaaggacaggacaaagaaggtgaagcgctcaaagctgtccaggtca
tcatcatcctcctcgacatctgacgacatcgattattccatccttgagaaagatgtggac
tttgagtcagatcccatggaggagtgtctcaggatctttaatgaatctaaagatgtgaaa
actgaagacaagggaaggctggggaaacagccatccaaagaggaagcaaatgaagaaaag
acagaagataatttaactactttgtttcccggccaaaaaagaaggatctctcatcttgtc
aaacaaggaaatgcagaggccccgagcaagccggtagtgcggccgtaccgtccccccacg
gcccaggaggtgtgttaccagaggatccagctggctcagcagcaggcagcacagctggtt
ggggccgttcaaaagacctctctctgtttgccaggagaaaagaggaggattgctcatgtg
ccaaatgcagccctcaccgcagcagccaagcaaagcctcgggagcagcaaggcgactctt
ggtggcaggagtgtcacaccttccaatgactctgaagcccccaccctgcctctgaagcct
tgcaccttggctgggatggcttccaagaccaccagcaccatcgtgcccaaaagggtagca
catgttccctccttacagagcaccgctttacagaggcctgttattcccacagaatttgga
gctaaagtcccaaccaacattcgtcagaggtatctcaatctcttcattgatgagtgcctg
aaattctgctcctcctcacaggaagccttcgacaaggccctggcagaggagaaggtggcc
tacgagcgcagcaccagtcgcaacatctacctgaacgtggccgtgaacaccctgaagaag
ctgcgcagcctcgtgcccaactccccggccagcaccaacaagacaagtaacaagaaggtg
gtgtcccacgaagctgtgctgggagggaagcttgctgccaagaccagcttcactctgaac
cgctcagggagcctgagagccgaggatctgacaggagctgccctgtaccggcgcctcaag
gagtacctgatgaccgaggagcagctcaaggagaacgggtacccgatgcctcaccccgag
aaggccggacgtgccgtgctcttcactgcagaggagaagaaagtgattgactcctcgtgc
aggatctgctgtcgctgtggcaccgagtacatggtctcagcctcggggagctgcatccgc
aaggaggagtgcgtccatcactggggccggctgcgcaagcagagagtgccaggtgggtgg
gaaactcactacagctgctgctccggagctgtggggtcaccaggctgccaggttgctaaa
caacacgtgcacgatgggcgcaaggagagcctggatggctttgtgaagacgtttgagaag
ctgcccacgactgatggctaccctgggatctacgccttagactgtgaaatgtgctacact
aagcaaggactggagctgacgagagtgaccgtgatcaactcggagctgaaggtggtgtac
gacacctttgtcaagccagactccaaggtggtggattacaacaccagattctcaggtgtg
acagaagaggacctggagaacacgagcatcaccctgcgcgatgtccaagctgtcctgctg
aacatgttcagtgcagacaccatattgatagggcacagcttggaaagtgacttatttgca
ctaaagctgatccacggcaccgtcgtggacacagccatcgtgttcccccaccgcctgggg
ctgccctacaagcgggccctgcgcacgctgatggccgactacctcaaacgcatcatccag
gacaatgtggaaggacacgactccagcgaggacgccagagcctgcatggagctgatggtg
tggaagatcaaagaggacgccaaagtgaagcgatga
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