Hirundo rustica (Barn swallow): 120764014
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Entry
120764014 CDS
T09369
Symbol
PDLIM2
Name
(RefSeq) PDZ and LIM domain protein 2
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120764014 (PDLIM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
120764014 (PDLIM2)
Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
120764014 (PDLIM2)
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Gene cluster
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Motif
Pfam:
PDZ
DUF4749
LIM
PDZ_6
PDZ_2
DmmA-like_C
HDV_ag
Zn_ribbon_double
DUF7623
Motif
Other DBs
NCBI-GeneID:
120764014
NCBI-ProteinID:
XP_039943620
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All DBs
Position
28:complement(3714756..3720815)
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AA seq
348 aa
AA seq
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MPVTVTLPGPAPWGFRISGGRDFGKPITVSKVTEHGKAAAGDLRPGDVIVTINGDSAAEM
LNVEAQNKIKQSRGQLRLQVERCPVPPPSHANGDSSPEMLATRFQDTLRMRSESQGALRT
LERSLAPLAHPPAASSHPVEQELACPGLPQERGRLSRQNSSQGPALPPPPRPPSPELGAP
QTPWETPRERRLSSPAPGTCHSQGSEPAMRRLEEDSEVYKMLQERRELRAAPRQSSTFRL
LQEALEDEEGGGPAAPFPSRLSAGARKPVAGVQKLHVCEKCGSSIATQAVRIQDGRYRHP
SCYTCADCGLSLKMRGHFWVGDELFCEKHARLRYQGPPGGPVPVSPRS
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgacggtgacgctgcccggcccggccccgtggggcttccgcatctctggggga
agagatttcgggaagcccatcacggtctccaaggtgacggagcacgggaaggcggccgcg
ggtgacctccggccgggggatgtcattgtcaccatcaacggcgacagcgcggccgagatg
ctcaacgtggaggcgcagaacaagatcaagcagagccgcgggcagctccggctgcaggtg
gagaggtgcccggtgccacctcccagccacgccaacggggacagctcgcccgagatgttg
gccacgcgcttccaggacacgctgaggatgaggagtgagagccaaggggccctgaggacg
ctggagcgcagcctggcacccctggctcacccacctgcagccagctcgcaccccgtggag
caggagctcgcctgtcccggcctcccccaggagcggggacgcctgagccgccagaacagc
tcgcagggcccggccctgcctccacccccccgcccaccctcaccggagctcggagccccc
caaaccccctgggagacccccagggagaggcgcctctcgtcccccgctcccggcacctgc
cacagccagggctcggagccggccatgaggcgcttggaggaggactcggaggtctacaag
atgctgcaggagcgccgggagctgcgggcggccccgcggcaatccagcaccttccgcctg
ctccaggaggctctggaggacgaggaagggggaggtcccgcagcccccttccccagccgc
ctctcggccggggctcgcaagcccgtggccggggtgcagaagctgcacgtctgtgagaag
tgcgggagcagcatcgcgacgcaggcggtgcggatccaggacggccgctaccgacacccg
tcctgctacacctgcgccgactgcggcctcagcctcaagatgcgcggccacttctgggtg
ggggacgagctgttctgcgagaaacacgcccgcctgcgctaccagggacccccggggggg
cccgtccctgtgtccccccgctcctga
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