Hirundo rustica (Barn swallow): 120764067
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Entry
120764067 CDS
T09369
Symbol
PLAT
Name
(RefSeq) tissue-type plasminogen activator isoform X1
KO
K01343
tissue plasminogen activator [EC:
3.4.21.68
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
120764067 (PLAT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hrt01002
]
120764067 (PLAT)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hrt00536
]
120764067 (PLAT)
Enzymes [BR:
hrt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.68 t-plasminogen activator
120764067 (PLAT)
Peptidases and inhibitors [BR:
hrt01002
]
Serine peptidases
Family S1: chymotrypsin family
120764067 (PLAT)
Glycosaminoglycan binding proteins [BR:
hrt00536
]
Heparan sulfate / Heparin
Coagulation and fibrinolysis
120764067 (PLAT)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin
Kringle
Trypsin_2
EGF
DUF1986
Motif
Other DBs
NCBI-GeneID:
120764067
NCBI-ProteinID:
XP_039943734
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Position
28:complement(5224925..5238670)
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AA seq
558 aa
AA seq
DB search
MWKTLRMEGKLPCLLVLVEAIMTAQCQGLHIRFKRGARSRAICTDNSSAEIYQHRGTWLR
LSGSRIEYCRCDSGRSHCHTVPVRACTRNKCYNGGQCSQAYYSPQLFICQCHQGFSGKQC
EIDTEVKCYKDTGVTYRGTWSVTESGTECLNWNSNGLVDWMYSGQRQDAAELGLGNHNYC
RNPDKDSRPWCYIYKGGRYTWEHCSVPSCSKVRNINCRSGRGRDYRGSHSVTSSGATCLK
WNSRILVNKLYTAWRRDAYQLGLGSHNFCRNPDNDSKPWCHVLKGNQLTWEYCNVPTCST
CGLRQRRVRQYRIKGGSYADIAAHPWQAAIFVKYHRVPGEHFLCGGILISSCWVLSAAHC
FEEGFSTNQLKIVLGRTSRATPEENEQKFQVKNYTVHQRFDSENFNNDIALLQLKSDAED
CAVETDTVRAACLPMPEMQLPDWTECEISGYGRNEEFSPFYSEHLKEGHVRLFPASRCTA
QYLDNRTVTDNMLCAGDTRHLDDACKGDSGGPLVCMKDDRMYLIGIISWGIGCGRKDIPG
VYTNVNRYLDWIRDTMKL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaaacactcagaatggaaggcaagctcccctgtctccttgtgctggtggaagca
atcatgactgcccagtgccagggcttacacattcgtttcaaacgaggagccagatctaga
gccatttgcacagataattcatctgcagaaatttaccaacacagggggacctggctgagg
ctttcagggagcagaatagaatactgtaggtgcgacagtggtcggagtcactgccacact
gtgcctgtcagagcctgtactagaaataaatgctacaatgggggccagtgttcacaggca
tattattccccacagctcttcatctgccagtgccaccaaggtttctcagggaagcagtgt
gaaatagatactgaagttaaatgctacaaagacactggagtaacatataggggtacctgg
agcgtgacagagagtggaactgaatgtttaaattggaatagcaatggcctggtggactgg
atgtacagtggccaaagacaggatgctgctgagctgggattgggcaatcacaactattgc
agaaacccagataaggattccagaccttggtgctatatctacaaagggggaaggtacacc
tgggaacactgcagtgtgccctcctgttcaaaagttaggaacatcaactgcagatctgga
agaggcagagattaccgtggcagccacagtgttaccagttctggagctacctgtttgaag
tggaattctcgaatccttgttaacaagctatatactgcttggagaagagatgcctaccag
ttgggccttggtagtcacaatttctgcaggaatcctgataatgacagcaagccctggtgc
catgtcctgaaaggaaatcagctcacatgggagtactgcaatgtacctacttgctccacc
tgtggcttacggcagcgcagagtacgccagtacaggattaaaggtggttcctacgccgac
attgcagctcacccatggcaagctgccatctttgtgaaatatcaccgagtgcctggagag
cacttcctctgtggaggaattctgatcagttcctgctgggttttgtcagctgctcactgt
tttgaggaaggctttagtacaaatcagctgaagattgtgctcggtaggacttcccgagca
actcccgaggaaaacgaacagaagtttcaagtgaagaactacactgtgcatcagagattt
gactcagaaaatttcaacaatgatatagctctgttgcagttgaagtcagatgcagaagac
tgtgctgttgaaacagacactgtacgtgctgcctgcctccccatgccagagatgcagctg
cctgactggactgaatgtgagatctctggttatggcagaaatgaagaattttctccgttc
tattcagagcatctgaaggaaggccatgtcagattgttcccagccagtcggtgcacagca
cagtatctagacaaccggacagttacagacaatatgttatgtgcaggagacacaaggcac
cttgatgatgcctgcaagggtgactctggagggcctctggtctgtatgaaggatgatcgt
atgtatctgattggaatcatcagctggggaataggttgtggccgcaaagacatacctggt
gtttatacaaatgtgaatcgttatctcgactggattcgcgacaccatgaaactctga
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