Hirundo rustica (Barn swallow): 120764122
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Entry
120764122 CDS
T09369
Symbol
PCNA
Name
(RefSeq) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03030
DNA replication
hrt03410
Base excision repair
hrt03420
Nucleotide excision repair
hrt03430
Mismatch repair
hrt04110
Cell cycle
hrt04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120764122 (PCNA)
03410 Base excision repair
120764122 (PCNA)
03420 Nucleotide excision repair
120764122 (PCNA)
03430 Mismatch repair
120764122 (PCNA)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120764122 (PCNA)
09144 Cellular community - eukaryotes
04530 Tight junction
120764122 (PCNA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hrt03032
]
120764122 (PCNA)
03400 DNA repair and recombination proteins [BR:
hrt03400
]
120764122 (PCNA)
DNA replication proteins [BR:
hrt03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
120764122 (PCNA)
DNA repair and recombination proteins [BR:
hrt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
120764122 (PCNA)
MMR (mismatch excision repair)
Other MMR factors
120764122 (PCNA)
TLS (translesion DNA synthesis) factors
Other TLS factors
120764122 (PCNA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Rad9
Hus1
FmdE
Motif
Other DBs
NCBI-GeneID:
120764122
NCBI-ProteinID:
XP_039943843
LinkDB
All DBs
Position
28:complement(650307..654727)
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AA seq
262 aa
AA seq
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MFEARLVQGSVLKRVLEALKDLITEACWDLGSGGISLQSMDSSHVSLVQLTLRSEGFDTY
RCDRNIAMGVNLSSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMD
LDVEQLGIPEQEYSCVVKMPSAEFARICRDLSHIGDAVVISCAKDGVKFSANGELGNGNI
KLSQTSNVDKEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSPTVTLSMSADVPLVVEYK
IADMGHLKYYLAPKIEDQQDGS
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaggcgcggctggtgcagggctcggtgctcaagcgagtgctggaggccctcaag
gacctcatcacagaggcctgctgggacctgggctcgggcggcatcagcctgcagagcatg
gactcctctcacgtctcgctggtgcagctcacgctgcgatcggagggcttcgacacgtac
cgctgcgaccgcaacatcgccatgggcgtcaatctgtccagcatgtccaaaatcctgaaa
tgtgcagggaacgaggacatcatcaccctgcgggccgaggacaacgccgacaccttggct
ctggtgttcgaggcaccgaaccaggagaaggtttctgattacgaaatgaagctgatggat
ctcgatgtggagcagctgggaatcccagagcaggagtacagctgtgtggtgaagatgccc
tcggccgagtttgcgcgcatctgccgggacctgagccacatcggcgacgccgttgtcatc
tcctgcgccaaggacggcgtcaagttctcggccaacggcgagctgggcaacggcaacatc
aaactgtcccagaccagcaacgtggacaaggaggaggaggctgtcacaatagagatgaac
gagccagtgcagctgaccttcgccctcaggtacctgaacttcttcaccaaagccaccccc
ctgtcccccacggtcacactcagcatgtctgcagatgttcctctggttgtggagtacaag
atcgctgacatgggacacctgaagtactacctggccccaaagatcgaggaccagcaggat
ggctcttaa
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