Hirundo rustica (Barn swallow): 120764146
Help
Entry
120764146 CDS
T09369
Symbol
MEF2D
Name
(RefSeq) myocyte-specific enhancer factor 2D isoform X1
KO
K09262
MADS-box transcription enhancer factor 2D
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
120764146 (MEF2D)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120764146 (MEF2D)
04131 Membrane trafficking [BR:
hrt04131
]
120764146 (MEF2D)
Transcription factors [BR:
hrt03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
120764146 (MEF2D)
Membrane trafficking [BR:
hrt04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
120764146 (MEF2D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
TFIIA
VPS13_N
FAM101
MecA
CPSF100_C
EOS1
DDHD
Connexin
Presenilin
eIF-3_zeta
Dala_Dala_lig_N
Piezo_TM1-24
TERB2
SpoIIP
Ig-CFAP74_2
FHIPEP
TMEM51
V_ATPase_I
Folate_carrier
Tim54
RR_TM4-6
OATP
DUF7165
SLC52_ribofla_tr
CSG2
Motif
Other DBs
NCBI-GeneID:
120764146
NCBI-ProteinID:
XP_039943872
LinkDB
All DBs
Position
29:561453..636417
Genome browser
AA seq
525 aa
AA seq
DB search
MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYAST
DMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKG
SEDLDILFKRYGSTVPAPNFAMPVTVPVTNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLS
PQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNG
SSLGKIIPAKSPPPPSHGTQLATNSRKPDLRVITSQSGKGLMHHLTEDHLALQNTQRLGV
SQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLTSAELSSLPAFSSPGGLSLGN
ISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQQQHLVPVSLGNLIQGSH
LSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSS
YEGSSERDDPARPDFGSSLGLLRSTSEPEGESPSVKRMRLDTWVT
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggggagaaaaaagatccagatccagcggatcacggacgagcgcaatcggcaggtgacc
ttcaccaagcgcaagttcggcctgatgaagaaagcctacgagctgagtgtcctgtgcgac
tgcgagatcgccctcatcatcttcaaccactccaacaagctgttccagtatgccagcacc
gacatggacaaggtgctgctcaagtacacggagtacaacgagccccatgagagccggacc
aacgcagacatcatcgagacgttaagaaagaaaggttttaacggctgtgacagcccagag
cccgacggcgacgactccatagaccagagccccttgatggaggataaataccgcaaaggc
agcgaggatctggatatcctgttcaagcgatacggttccacagtgcccgctccgaacttc
gccatgcccgtgacggtgccggtgaccaaccaaaacacgctgcagttcagcaacccgggc
agctcgctggtgacccagtccctggtgacctcctcgctgacagacccccggctcctgtcc
ccacagcagccagcattgcagaggaacacagtgtccccagggctgccgcagcggcccgcc
agtgcaggagcgatgcttgggggagacctgaacaacacgaatggagcctgcccaagcccc
gtgggaaatggctacgtcagtgccagagcctctccgggtctccttcccgtgtccaacggc
agcagcctgggcaagatcatcccggccaagtccccgccgccaccctcgcacggcacgcag
ctggccaccaacagccgcaagccggacctgcgcgtgatcacctctcagagcggcaagggg
ctgatgcatcatctgaccgaggaccacttggctctgcaaaacacgcagcggttgggtgtc
tctcaagcaactcactctctaaccacaccagttgtttccgtggcgactccaagtttgctg
acgcagggtctgcccttctcggccatgcccacagcctacaacacagattatcagctgacg
agcgccgagctgtcctcgctgccggcgttcagctcacctggagggctgtcccttggcaac
atctctgcctggcagcagcagcagcagcagcagcagcaacagcagcagcagcagcaacag
caacaacagcagcaacagcagcaacagcaacaacagcaacaacagcagcagcaacagccg
cagcagcagcagcagcacctggtcccggtgtcgctaggaaacttaatacaagggagtcac
ttgtcccacaccaccactttgactgtcaacaccaaccccaacatcagcatcaagtcggag
cccgtctcgcccaaccgggagaggaacactgccaccccgctcagcaccttcccccaccag
ccccggcacgagcccaccggccgctcgcccgtcgacagcctcagcagcaacaccagctcc
tacgagggcagcagcgagcgggacgatcccgcccgccccgatttcggctcgtccctgggc
ctcctgcgatccaccagcgagcccgagggggagagcccctccgtaaagcgcatgcggttg
gatacctgggtcacataa
DBGET
integrated database retrieval system
