Hirundo rustica (Barn swallow): 120764147
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Entry
120764147 CDS
T09369
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03013
Nucleocytoplasmic transport
hrt03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120764147 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120764147 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120764147 (NUP153)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120764147 (NUP153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
120764147
NCBI-ProteinID:
XP_039943884
LinkDB
All DBs
Position
1:90597988..90643389
Genome browser
AA seq
1455 aa
AA seq
DB search
MASGGGGGGGGGGKIRTRRHHLGAAKPPYARGKQQLGLLSRVTESVKNIVPGWLQKYFNK
REDKCVDMNESASEEENPVNYHHDYANEDAMVIDGRVTPESARINLEEPSTSRSALNFSD
VLTRPSLHRSHLNCTVLDSTVPHCQPSTSSALGIGSPGLSLVKEIKDSTSQHDDDNISTT
SGFSSRASDKDVTVSKNTSAPLLWSPEAERSHSLSHHPPSSSKKPAFNLSAFGSPSPSLG
NTSVFKTRQLGDSPFYPGKTSYGGAAAAARQTKVQISAYQPPIKRQMKAKQANVQSYGVT
SSTARRILQTLEKMSSPLADAKRIPSSVSSPLSSPVDRSVLNVTSFQSRQNQMDSQHPPV
QKLVTPKPISLTGSRITYFKPSLKSATNSRKIHQRVDTDHQDMVEESFPAEKPVKSSESN
SSYPKHDTPASNGLSSGGRMDSACGKMRRERERYCASRPGQKQQLEMEQEELPEVPLPIS
TASLPTFSFSFPASSAESSSPSIVSKAVMNKVQPASNVGSPTFVFSSPIVKSTEVEVLPP
LSQIKFTFSVPVVKSSELSKSTDTPVTSILSPGSATVNSTSNKKEEEEEYDGFCKPAKFL
KQGSVLDILKTPGFMSGKSPSCSSAQPVTSTVVYTRPAISSFSAGKDTSKQASSFWQSDT
QDPCLQNKATDGKCVTCEAAKVSTVESTKQTISVSPCVSSKTAAPTAGALGFEDKFKPAP
NTWDCDTCLVQNKPEATKCIACETPKPGTGVMPALTLPVVTDNSVTVTSTPSSTGTAVTL
GFGDKFKQPKGSWNCSVCLLQNKAEDSKCVACQSEKPGSSVPVTSSNVSAFSASSGGFLD
LDKFKKPEGSWECEVCLVQNKAEATKCIACESAKPGTKAELKGFGTAAASTNAAMPSFTF
GVPSSSSESSQTLGSTGNFKFGEQSFKFGIASESASSSSVIGGFKFPTGGSGNFKFGVSS
SDSKSDDSKKESKSNSFTFGLPSTSSQAPSTFQFGTTSLGQQEKKEEPVLGGFGFATSST
SSVATNENKTGVSGFTFGTVAEKDAASPALPFKKSDEKKDETVSTKGGFSFGSVESAPAS
QFVLGRAEEKRDSVTSTGPLAFGKKADSEELKAQPIFSSGTTEHTKEESTAKPVFNFSFG
KPSEKESEQAKAPFAFGAPTSTCDQGASFSFLSSSSSSTVVPTTSASSSSMFGSTLSSSN
PQPVPTPFVFGQPSNTVTSSVFGNPAESATAQSFGFSQENKPATTSSSTGSTLTPFLFAS
GESSTNAANSGFTFGATTTSSSTGSSSSFLFGSGPPALAAGPAFGASQPPTFGPSPGSGQ
QSAPSFGSLSTTLFSGGSQPAPSAFGSVTSSTQPPVFGQQAAHQPAFGSGTPGTGSVFRF
GGSNTNFSFPSNPGVFTFGANPPAPAPPAPPSGTSGFSFNQHSAFTVGTNGKNVFSASGS
SVPARKIKTAVRRRK
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggtggcggcggcggcggcggtggcggcggcaagatccggacccgacggcac
cacctgggagccgcgaagccgccctacgcgaggggcaagcagcagctggggctccttagc
agagtgactgaatcagtgaaaaacattgtaccaggatggttgcagaagtatttcaataaa
agggaagataaatgtgtagatatgaatgaatctgcaagcgaggaagagaatccagtaaac
tatcaccatgattatgcaaatgaagatgccatggtaattgatgggagagtcacgcctgaa
tcagcaagaattaatttagaagaaccatccacgagcaggtctgcactgaatttctcagac
gtgctaacaaggccctcccttcaccggagccatttgaactgcaccgtgttggattccaca
gtcccacactgtcagccctccacatcttccgcacttggcatcggcagtcctgggctgtcc
ctcgtaaaggaaataaaagattctacctctcaacacgatgatgataacatctcaacaacc
agcggcttctcttctagagcatctgataaggatgtcacagtttcaaaaaatacttcagca
ccactgctctggtccccagaagctgaaagatctcattccctctcacatcatcctccatct
agctctaaaaaacctgcattcaatttatctgcttttggatctccatctccttcacttgga
aacacttctgtctttaagacaagacagcttggggattctccattttaccctggaaagacc
tcttatggtggtgcagctgctgcagcaaggcagacaaaagtgcagatttctgcttatcag
ccaccaataaaaagacaaatgaaagctaaacaagcaaatgtgcaatcctatggtgtgaca
agttccacagcgcggcgcatcttgcagacgttggagaagatgtcgagtcctttggcggat
gctaaaaggattccatcttctgtttctagtccgctgtcttctcctgtggacaggagcgtg
ctgaacgtgactagcttccaatccagacaaaaccagatggattcgcaacatccacctgtc
cagaaacttgtgacaccaaagccaatctccctgacagggagtcggatcacgtattttaaa
ccatctctgaaatcagctactaattccagaaaaattcaccaaagggtagatacagaccat
caagatatggtggaggagagttttcctgcagaaaagcctgtaaaatcatctgaaagcaat
tcgagctaccccaaacatgatactcctgcatccaacggtctgtcttcaggaggaaggatg
gatagtgcctgtggcaagatgagaagggaaagggagcgatactgtgcatcaagacctgga
caaaaacaacaactggagatggagcaagaagaactacctgaggtacccctgcccatcagc
actgcatcgctgccgacgttcagcttcagtttccctgccagtagtgctgagtcttcatca
cccagcattgtttcaaaagcggtgatgaacaaggtacaaccagcaagtaatgttggcagt
cctacgtttgtattttcatctccaattgtgaaatctaccgaggtggaagtgctacctcca
ttgtctcagattaagtttacatttagtgttcctgtcgtaaagtcatcagagctttctaaa
tccactgatacaccagtgacatccatccttagtccaggtagtgccactgtaaacagcacc
agcaataagaaggaagaggaagaagaatatgatgggttctgcaaacctgctaagttcttg
aagcaaggaagtgtgttagacattctaaaaacccctggctttatgtctgggaaatcaccc
tcctgttcatctgcacagcctgttacgagcacagtggtctatacaaggcccgcaataagt
agtttttctgcaggtaaagatacctctaaacaagcatcctcgttttggcagtctgacaca
caggacccgtgtctgcagaacaaagccacagatggcaaatgtgtaacatgtgaagctgct
aaagtgtccactgttgagagtacgaagcagacgatcagtgtgagcccttgtgtttcctcc
aagacagcagctcctacagcaggggcgctgggctttgaagacaaatttaaaccggcaccc
aacacgtgggattgtgatacctgtctggtccagaacaaacctgaagctacaaaatgtata
gcatgtgagacaccaaagcctggaacaggagtgatgcctgctctgacactgccagtggtc
acggacaactcggtgacagtgacatccacccccagcagcactggcacagcagtcactctg
gggtttggagacaaatttaaacagccaaaaggctcttggaactgttcagtgtgccttcta
caaaacaaggcagaagacagcaaatgtgtagcttgtcagtctgagaaaccagggagttca
gtgcctgtgaccagtagcaatgtttctgcattttctgcttcttctggaggttttttggat
ttagacaaattcaagaagcctgaaggaagttgggaatgtgaggtctgcttggtccaaaac
aaagcagaagccacaaaatgcatagcctgtgaaagtgcaaagccgggcaccaaagcagag
ctcaaaggttttggtactgctgctgcatctacaaatgctgcaatgccatcatttacattc
ggtgtcccgtcatcgtcctctgaatcgtctcaaacattaggtagcacgggaaattttaaa
tttggagaacaaagctttaagttcggcattgcatccgaatccgcatcatccagcagtgtg
attggaggatttaagtttcctactggtggttcagggaacttcaaatttggagtttcttct
tcagactctaaatcagatgacagcaaaaaagaaagcaaaagcaacagttttacctttgga
cttccatctacaagcagtcaggctccttcaacatttcagtttggaacgacgagtctggga
cagcaggaaaagaaagaggaaccagttttgggaggtttcggttttgctacaagttctact
tcttccgtagctactaatgagaataaaactggagtcagtggcttcacttttggaactgtg
gcagaaaaggatgcagcatcacctgctttgccatttaagaagtcagatgagaaaaaggat
gaaactgtttcaacaaagggaggcttctcttttggcagtgtggaatctgcacctgcctca
cagtttgttctgggaagggcagaagagaagcgggactctgtcacttccactggtccgtta
gcatttggaaagaaagctgacagtgaagagttaaaggcacagcctatcttttcatctggg
acaactgagcataccaaagaggagagcacagcaaaacctgtattcaattttagttttggt
aaaccatcggaaaaggagagtgagcaggcaaaggcaccttttgcatttggggctccaacc
agtacttgtgatcaaggagcatccttcagcttcttgagctccagttcctccagcacagtg
gtacccaccacttcagccagcagcagcagcatgtttggcagcaccctctcttcctcaaat
cctcagccagttcccactccctttgtgtttggacaacccagcaacactgtgaccagctct
gtttttggcaatcctgcagaatctgcaacggctcagtcatttggcttctctcaagaaaac
aaaccagcaaccacatcttccagcactggctcgactcttactccatttctctttgcttca
ggagagagcagtaccaatgcagcaaattcaggatttacttttggagccacaactacatcc
agttcaacagggtcatcgtcttcgtttctctttggctctgggcctccggcgcttgctgct
ggcccagcctttggcgccagtcagccaccaacatttggcccaagcccaggctccggccag
caaagcgctccaagttttggatcgctgtcgacaacgttgttttctggtggctctcagcct
gctccttctgccttcggctcggtcacaagcagcactcagccccctgtgtttggacagcag
gcagcacatcagccagcttttggctctggtacccccggtactggttctgtattccggttt
ggaggtagtaatactaatttcagctttccaagtaacccaggagtattcacttttggtgca
aatcctcctgcaccagcacctcctgcaccgccttctggcacttcaggattctcgttcaac
cagcattcagcatttacagtggggactaatgggaaaaatgttttctctgcctctggatct
tcagttcctgctcggaagataaagactgcagttagacgtagaaagtaa
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integrated database retrieval system
