Hirundo rustica (Barn swallow): 120764171
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Entry
120764171 CDS
T09369
Symbol
DENND4B
Name
(RefSeq) DENN domain-containing protein 4B
KO
K20163
DENN domain-containing protein 4
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120764171 (DENND4B)
Membrane trafficking [BR:
hrt04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
120764171 (DENND4B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
Motif
Other DBs
NCBI-GeneID:
120764171
NCBI-ProteinID:
XP_039943909
LinkDB
All DBs
Position
29:1598059..1615003
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AA seq
1444 aa
AA seq
DB search
MSDEKPPQLVDYFVVAGLAEASRALEEEQQPRPARPGEPITDVAVIIRSQGEEVPQGFTC
IETSTSGHPVDLNAGLLNNPQMFLCYKRGRDKPPLIELGVHYEGKDRPKPGYHILDTTPY
SRSANLASGSPGHQRTFLTFRRAAEPPGHHTLGVTDICLVMPSKGESTPHTFCRVDKNLN
TSMWGPALYLCYKIAVAKDNTLVYEAGLLSRYPEQDSESFPLPESVPVFCLPMGATIESW
PVGTKYPLPVFSTFVLTGASGDKVYGAAIQFHEAFPRERLSEAQALRLGLLSVVDRRPVP
GRSLHTRKSICVLSHWPFFDVFRKFLMFIYRYSISGPHVLPLETHISHFMHNVPFPSPQR
PRILVQMSPYDSLLLCRPVSSPLPLSGASFLTLLQNLGPDNAVALLVAVLTEQKLLIHSL
RPDVLTSVGEALVAMIFPLRWQCPYIPLCPLALADVLCAPVPFIVGIHSSYFDLYEPPRD
VIFVDLDTNTIFQSEERKLLSPRALPRRPCKVLLASLHSLSQQLDELLSAPGEEEPPELV
LSDAEAAGARRAQLELEARAAFLRFMACALRGYRSFLRPIAPAPAPAGRDAGSLFALQGF
LHSRERAYQRFYGQLLRTQLFTQFIEDCSFASDREPCLEFFDTCVDKVQVDLEKPEDAPL
MELDDPRGGEHTVFITPPEQPAGPDGTEPPARYRYDGFPTLRPELLEPPRDPLVAQLCQA
RSSAPSSPAPRRTKQEMKVAQRVAQKSSAVPELWARCLLGHCYGLWFLYLPTHVRAAPAK
LRALQLAYDVLRKMEQHKVVLPDEVCYRILMQLCGQYGEPVLSVRVLLEMKRAGIVPNTV
TYGYYNKAVLESKWPAGTQGGRLRWAKLRNVVLGAAQFRQPLRQRERRSAAGDPPGARAA
PAPRPPLQRQTTWAGRSLRDPTPAPRLVKSGSLSFPGSSRSEGGARAGPGSPPAPPAPPT
PPAPPGSAHGSLSDVGTDESGGDEGPGGGPGGGPGGGVTPRRGLAAKLQQLLSPGKRPPP
PPPRPAEPPREPGTRRGSEQRDAEPPWRRSPAAESLLRPRERPESTASESSVSLGSELDL
SDASGGSTGAPKPTEPCMDGTAGTEPPALEVLLSSCSRCPGCAGLVFDEELMAGWTSDDS
NLNTSCPFCSRSFVPFLSIEIRDFRRPPSPPGAGPVPPSPQGPVLSDRRRCLELDESPEL
CNGCADTPPPGRCERVAFAYVSPLVLRKELESLVENEGGELLARPELVDSHPIIYWNLVW
YFQRLALPSNLPLLLLGSQHAPRDPQPPEPWRVRVRLLWDVLSPEPESCPPLYILWRVHS
NIPPRLHPWGPPPAPFSLPFLEALLSHVGLNEVHKAIGLFLETLAAPGAPRTLHRSIYRE
LLFLTLAAMGREHTDIAAFDRRYRSALGKLGGALGRDELRRRRAQPPSAKASDCRRTFGA
PPEC
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgagaagcccccgcagctcgtggattacttcgtggtggccgggctggcggag
gcgtcgcgggcgctggaggaggagcagcagccgcggccggcgaggcccggggagcccatc
acggacgtggccgtgatcatccgctcgcagggcgaggaggtgccgcagggcttcacctgc
atcgagaccagcacgtcgggtcaccccgtggacctcaacgcggggctgctcaacaacccc
cagatgttcctgtgctacaaacgcgggcgggacaaaccccccctgatcgagctgggggtg
cactacgagggcaaggaccgcccgaagccgggctaccacatcctggacacgactccctac
agccgctcggccaacctggcctcgggctccccgggccaccagcgcacgttcctgacgttc
cggcgcgcggccgagccccccggccaccacacgctgggggtcaccgacatctgcctggtg
atgcccagcaagggcgagagcacgccccacaccttctgccgcgtggacaagaacctcaac
accagcatgtggggccccgcgctgtacctgtgctacaagatcgccgtggccaaggacaac
acgttggtctacgaggcagggctgctgagccgctaccccgagcaggacagtgaatccttc
ccgctgcccgagtcggtgcccgtgttctgcctgcccatgggggccaccatcgagagctgg
cccgtgggcaccaagtaccccctgcccgtcttctccaccttcgtcctcaccggcgcctcg
ggggacaaggtgtacggcgccgccatccagttccacgaggcgttcccgcgggagcggctg
tcggaggcgcaggcgctgcgcctggggctgctcagcgtggtggaccggcggccggtgccc
gggcgctccctgcacacccgcaagagcatctgcgtcctgtcccactggcctttcttcgac
gtcttccgcaagttcctcatgttcatctaccgctactccatctcgggcccccacgtgctg
cccctggagacgcacatctcccacttcatgcacaacgtgcccttcccgtccccgcagcgc
ccgcggatcctggtccagatgtccccgtacgacagcctgctgctgtgccggcccgtgtcc
tccccgctgccgctcagcggggccagtttcctgacgctgctgcagaacctgggccccgac
aacgccgtggcgctgctggtggccgtcctcaccgagcagaagctgctcatccactccctg
cgccccgacgtcctgaccagcgtgggcgaagccctggtggcgatgatcttccccctgcgc
tggcagtgcccctacatcccgctgtgcccgctggcgctggctgacgtgctgtgtgccccc
gtgcccttcattgtaggcatccactccagctacttcgacctctacgagcctccccgcgac
gtcatcttcgtcgacctggacaccaacaccattttccagagcgaggagcggaagctgctg
tcgccccgcgctttgccccgccggccctgcaaggtgctgctggcctcgctgcacagcctg
tcccagcagctggacgagctgctgagcgctccgggcgaggaggagcctccggagctggtg
ctgagcgacgcggaggccgcgggcgcgcgccgggcgcagctggagctggaggcgcgggcg
gctttcctgcgcttcatggcctgcgccctgcgcgggtaccgctccttcctgcgccccatc
gcgcccgcgcccgccccggccggccgcgacgccggcagcctcttcgcgctgcaggggttc
ctgcactcccgggagcgggcgtaccagcgcttctacgggcagctgctgcgcacgcagctc
ttcacgcagttcatcgaggactgctccttcgccagcgaccgcgagccctgcctcgagttc
ttcgacacctgcgtcgacaaggtgcaggtggatctggagaagcccgaggacgctcccctg
atggagctggacgatccccggggcggggagcacacggtgttcatcacccccccggagcag
ccggcggggccggacggcaccgagccccccgcgcgctacaggtatgacgggttccccacg
ctgcgcccggagctgctggaacccccccgggacccactggtggctcagctgtgccaggcc
cggagcagcgccccgagcagccccgcccctcggcgcaccaaacaggagatgaaggtggcc
cagcgcgtggcccagaagtcgtcggcggtgccggagctgtgggcgcggtgcctgctgggc
cactgctacggcctctggttcctctacctgcccacgcacgtgcgcgccgcccccgccaag
ctgcgcgcgctccagctcgcctacgacgtcctgcgcaagatggagcagcacaaggtggtg
ctgcccgacgaggtgtgctaccgcatcctgatgcagctctgcgggcagtacggcgagccc
gtgctgtccgtgcgcgtcctgctcgagatgaagcgcgccggcatcgtccccaacaccgtc
acctacggctactacaacaaggcggtgctggagagcaagtggccggcggggacgcagggc
gggcggctgcgctgggccaagctccggaacgtggtgctgggggcggcgcagttccggcag
ccgctgcggcagcgggaacgccggagcgccgccggagaccctccgggtgcccgggccgcc
cccgccccacgccccccgctgcagcgccagaccacctgggcaggtcgcagcctccgggac
ccaaccccggcgccgcggctggtgaagagcggcagcctcagtttccccggcagctcccgg
agcgaggggggggcccgagccgggccggggtcgccccccgcgccccccgcgccccccacc
ccgccggccccccccggctctgcccacgggagcctctcggacgtgggcacggacgagagc
ggcggggacgagggcccgggcgggggtcccggggggggtcccgggggcggggtgaccccg
cgccgggggttggcggccaagctgcagcagctgctgtcgcccggcaagcggccgccgccg
ccgccgccgcgccccgccgagcccccccgggagcccgggacgcgccggggctcggagcag
agggacgcggagcccccgtggcgccgcagccccgcagctgagagcctgctgagaccccgg
gagcggcccgagtccacggcgtcggagagctccgtgtcgctgggcagtgagctggacctg
tccgatgcctcggggggcagcaccggagcccccaaacccacggagccctgcatggatggg
acagcggggacagagccccctgccctggaggtgctgctgtccagctgctcgcgctgcccg
ggctgcgccgggctcgtgttcgacgaggagctcatggccggctggacctcggacgactcc
aacctcaacacctcctgccccttctgctcccgctccttcgtgcccttcctgagcatcgag
atccgcgacttccgacggccccccagcccccccggggccggcccggtgcccccctccccg
caggggccggtgctcagcgaccgccggcgctgcctcgagctggacgagagccccgagctc
tgcaacggctgcgccgacaccccgcccccggggcgctgtgagcgcgtggccttcgcctac
gtgagcccgctggtgctgcgcaaggagctggagagcctggtggagaacgagggcggggag
ctgctggcacggcccgagctggtggacagccaccccatcatctactggaacctggtgtgg
tacttccagcgcctggccctgcccagcaacctccccctgctgctgctgggctcccagcac
gccccccgcgacccccagccccccgagccgtggcgggtgcgcgtgcggctgctgtgggat
gtgctgagccccgagcccgagagctgcccgccgctgtacatcctgtggagagtgcacagt
aacatccccccacggctgcacccctggggaccccctcccgccccgttctcgctgccgttc
ctcgaggccctgctgagccacgtggggctcaacgaggtccacaaagccatcgggctcttc
ctggagaccctcgcggcgcccggagccccccggaccctgcacaggagcatctaccgggag
ctgctgttcctgacgctggcggcgatgggccgggagcacacggacatcgccgccttcgac
cgccggtaccgctcggcgctggggaagctcggcggcgccctgggcagggacgagctgcgg
cggcggcgggcgcagccccccagcgccaaagcctccgactgccgccgaaccttcggggct
ccccccgagtgctga
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