KEGG   Hirundo rustica (Barn swallow): 120764248
Entry
120764248         CDS       T09369                                 
Symbol
SF3B4
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
hrt  Hirundo rustica (Barn swallow)
Pathway
hrt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hrt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120764248 (SF3B4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hrt03041]
    120764248 (SF3B4)
Spliceosome [BR:hrt03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    120764248 (SF3B4)
 Complex B
    120764248 (SF3B4)
 Complex C
   U2 SnRNP specific factors
    120764248 (SF3B4)
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB
Other DBs
NCBI-GeneID: 120764248
NCBI-ProteinID: XP_039944030
LinkDB
Position
29:complement(1314455..1318554)
AA seq 418 aa
MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
FLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK
DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSVPAPVVTALGPGVTPPGLPPP
GSFPPPVPPPGALPPGMPPAMPPPPMPPGAGAPGPPSGAAPAGGHPPHPHPFPPGGMHHP
GMPPMQVHHGPPGMGQHHPGPPGSGGQPPPRPPPGMPHPGPPPMGLPPRGPHFGSPMGHP
GPLPHHGLRGPPPLMPPHGYNGPPRPPPYGYQRVPLPPRPAQRPPGVPPRGPLRGPLP
NT seq 1257 nt   +upstreamnt  +downstreamnt
atggcggcggggccgatttcagagaggaaccaggatgccacggtttacgtggggggcctg
gacgagaaggtcagcgagcccctgctctgggagctcttcctgcaggccgggccggtggtc
aacacgcacatgcccaaggaccgggtcacgggccagcaccagggctacggcttcgtggag
ttcctgagcgaggaggacgccgactacgccatcaagatcatgaacatgatcaagctctac
gggaaacccatccgggtgaacaaggcctcggcccacaacaagaacctggacgtgggcgcc
aacatcttcatcggcaacctggaccccgagatcgacgagaagctgctctacgacaccttc
agcgccttcggcgtcatcctgcagacccccaagatcatgcgggaccccgacacgggcaac
tccaagggctacgccttcatcaacttcgccagcttcgacgcgtcggacgcggccatcgag
gccatgaacgggcagtacctgtgcaaccgccccatcaccgtgtcctacgccttcaagaag
gactccaagggcgagcggcacggctcggcggccgagcggctgctggcggctcagaacccc
ctctcccaggccgaccggccccaccagctcttcgccgacgcccctccgcccccgtccgtg
cccgcgcccgtggtcaccgcgctggggcctggcgtcaccccgccaggcctgcctcccccc
ggctcgttcccgccaccggtgccgccgcccggagcgctgcccccggggatgcccccggcc
atgccgccaccaccgatgccaccgggagccggagcgccgggacccccctcgggagctgcc
cccgccgggggacaccctcctcatcctcaccccttcccgccgggagggatgcaccaccca
ggaatgccgccgatgcaggtgcaccacggaccgcccgggatggggcagcaccacccggga
ccgccgggctccggagggcagccgcccccccggccccccccgggaatgccgcaccccggg
ccgccccccatggggctgccccctcgggggccgcatttcggctctcccatgggtcaccct
gggccgctgccgcaccacgggctccgcgggcccccgccgctgatgccgccccacggctac
aacgggcccccccggccccctccctacggctaccagagggtcccgctgccccctcggcca
gcccagagaccccctggagtccccccccgcgggcccctgaggggacccctgccctga

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