Hirundo rustica (Barn swallow): 120764282
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Entry
120764282 CDS
T09369
Symbol
KHDC4
Name
(RefSeq) KH homology domain-containing protein 4
KO
K25780
kelch domain-containing protein 4
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrt03041
]
120764282 (KHDC4)
Spliceosome [BR:
hrt03041
]
Complex B
Other components
Prp19-related factors
120764282 (KHDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
KH_12
RxLR_effector
Motif
Other DBs
NCBI-GeneID:
120764282
NCBI-ProteinID:
XP_039944110
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Position
29:complement(1017928..1030440)
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AA seq
619 aa
AA seq
DB search
MSAGGGAQRDAGAAGGRRSKWDQPGPAPNFLLPGTAPLPGRPFPGGGGDGGAAVAGSESS
AAPSGALDAAAAVAAKINAMLMAKGKLKPAPSTADKLQALGKGPATSKSKDDLVVAEVEI
NDVPLTCRNLLTRGQTQDEISRLSGAAVSTRGRFMTAEEKAKVGPGDRPLYLHVQGQTRE
LVDRAVNRIKEIITNGVVKAATGSSPTFNGATVTVYHQPAPIAQITPAVGQKPPFQSGMH
YVQDKLFVGLEHAVPTFNVKEKVEGPGCSYLQHIQIETGAKVFLRGKGSGCIEPASGREA
FEPMYIYISHPKPEGLAAAKKLCENLLQTVHAEYSRFVNQITTAVPLAGFTQPATINSVP
SQPSYYPSNGYQSGYPVVPPPQQPVQPPYGVPGIVPPAVPLAPGVLPALPAAVPPVPTQY
PIPQVQPPASTGQSPLSAPFLPAAPVKTTLPAATQPQVQPHPQGQKRRFTEELPDERESG
LLGYQHGPIHMTNLGTGFSSQSELEGAASKPASSSGKERERDRQLMPPPAFPVTGLKSES
EERKGAGSLPGNHDHQAKKMKTAEKGFGLVAYAGDSSDEEEEHGGHKNASTFSQGWSLGY
QYPSSQQRAKQQMPFWMAP
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgggcggcggagcgcagcgggacgcgggggccgcgggcgggcgtcgcagcaag
tgggaccagcccggcccggcgccaaatttcctcctccccggcacggcgccgctgcccggg
cgcccgttccccggcgggggcggcgatggcggcgccgccgtggccgggtccgagagctcc
gcggcgccctccggagcgctggatgcggccgcggccgtggcggcgaagatcaacgcgatg
ctgatggccaaagggaagctgaagccggcgcccagcacggcggacaagctgcaggctctg
ggcaaaggtccagctacgagtaaaagcaaggatgaccttgtggtggcagaggtggagatc
aacgacgtccccctcacgtgcaggaacctgctgaccaggggccagacccaggacgagatc
agtcgcctgagcggagcggctgtctccactcgagggaggttcatgactgcagaagagaaa
gccaaagtgggacctggagatcgtcccttgtaccttcatgttcagggtcagacacgggag
ctggttgacagagctgttaacagaatcaaagagatcattaccaatggagtggtgaaagca
gccacgggctccagcccgacgttcaacggagccacggtcactgtctatcaccagccagcc
cctatcgctcagataactccagctgttggccaaaaacctccgttccagtcagggatgcat
tatgtccaggacaagttatttgttgggctggaacatgctgtgcccacatttaatgtgaag
gagaaggtggaagggcctggctgctcctacttgcagcacattcagattgaaactggtgcc
aaagtctttcttcgagggaaaggctcaggttgcatagagccagcatcaggcagagaagcc
tttgaacccatgtacatctacatcagtcacccaaagccagaaggtttggcagctgctaaa
aagctgtgtgagaacctgttgcaaaccgttcatgccgagtactcccgatttgtcaaccag
ataaccactgcagttcccttggcaggcttcacccagccggccacaatcaacagcgtccct
tcccagccctcctattacccttccaacgggtaccagtcgggttatcctgtggttccccct
cctcagcagcctgtccagcctccctacggggtgccagggatagttcccccggcagtgccc
ttggctcctggagtgctcccagcgctgcccgcggcggtgccgcccgtgcccacgcagtac
ccgattcctcaggtccagcctccagccagcactggccagagtccgctgagcgctcctttc
cttcccgctgccccggtaaaaaccaccttgccagctgctacccagccacaggtgcagccc
catccccagggccaaaagagacgcttcaccgaggagctgcctgatgagagagagtcagga
ctgctgggataccagcatggacccattcatatgactaatttaggtacaggcttctccagt
cagagcgaactcgagggagccgcgtcgaagccagcaagttcctcaggaaaggagagagag
agggacaggcagttgatgcctccgccagcttttcctgtcactggtttgaaatcggaatcg
gaagaaagaaaaggtgcggggtctttaccaggcaaccatgatcatcaagccaagaagatg
aaaactgcagagaaaggctttggattagtggcctatgctggagattcgtcagatgaagag
gaggaacacggtggccataaaaacgcaagtactttttcacagggctggagtttggggtac
cagtacccatcctcccaacagcgagctaaacaacagatgccgttctggatggcaccataa
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