Hirundo rustica (Barn swallow): 120764283
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Entry
120764283 CDS
T09369
Symbol
THBS3
Name
(RefSeq) thrombospondin-3
KO
K04659
thrombospondin 2/3/4/5
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04145
Phagosome
hrt04510
Focal adhesion
hrt04512
ECM-receptor interaction
hrt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120764283 (THBS3)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120764283 (THBS3)
09144 Cellular community - eukaryotes
04510 Focal adhesion
120764283 (THBS3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120764283 (THBS3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120764283 (THBS3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hrt04147
]
120764283 (THBS3)
00536 Glycosaminoglycan binding proteins [BR:
hrt00536
]
120764283 (THBS3)
Membrane trafficking [BR:
hrt04131
]
Endocytosis
Phagocytosis
Opsonins
120764283 (THBS3)
Exosome [BR:
hrt04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120764283 (THBS3)
Exosomal proteins of colorectal cancer cells
120764283 (THBS3)
Exosomal proteins of bladder cancer cells
120764283 (THBS3)
Glycosaminoglycan binding proteins [BR:
hrt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120764283 (THBS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF
cEGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
120764283
NCBI-ProteinID:
XP_039944111
LinkDB
All DBs
Position
29:complement(784730..791950)
Genome browser
AA seq
956 aa
AA seq
DB search
MGAPGSPALLALLLLGAAAAARQELQVIDLLLVSEARQMASVAHKIRMELLTVNDVYLLS
TFRLPPKQGGTLFGLYSKKDNTRWLEVSVVGKINKVLVRYLREDNKVHSVNLQHAHVADG
QSHSVIVRLSGLRRDTLNVELYVDCKQMDSSVGLPELSEIPLAEVESIEVRTGMKAYQRM
QGFVESMKLILGGSMSRVGALSECPFQGDESIHSAVTSALASILGEQTKALVTQLTLFNR
VLTELREDIRDQVKEMSLIRNTIMECQVCGFHEHRSRCNPNPCFSGVDCMETYEYPGYRC
GPCPPGLEGNGTHCVDIEECAHANPCFPGSKCINTAPGFRCEPCPRGYRGNTVSGVGVDY
AKASKQVCTDIDECNDGNNGGCDPNSICTNTLGSYKCGPCKSGFVGNQTSGCVPQRSCST
PTSNPCDINGFCLFERNGEISCACNVGWAGNGNVCGPDTDLDGYPDEPLPCIDNNKHCKQ
DNCRLTPNSGQEDADNDGIGDQCDDDADGDGVKNVEDNCRLFPNKDQQNSDTDSFGDACD
NCPNVPNNDQRDTDSNGEGDACDNDIDGDGIPNMLDNCPKVPNPLQTDRDEDGVGDACDS
CPEMSNPTQTDMDSDLVGDICDTNEDSDGDGHQDTKDNCAEIPNSSQLDSDNDGLGDDCD
NDDDNDGIPDYVAPGPDNCRLIPNPNQKDSDGNGVGDVCEEDFDNDTVVDQLDACPESAE
VTLTDFRAYQTVILDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGT
FHVNTITDDDYAGFIFSYQDSASFYVVMWKQTEQTYWQATPFRAVAEPGLQLKAVKSSTG
PGEHLRNALWHTGHTPDHVRLLWKDPRNVGWRDKTSYRWQLAHRPQVGYIRVRLYEGPQL
VADSGVIIDTTMRGGRLGVFCFSQENIIWSNLQYRCNDTIPADFEPFRRFLLEGRE
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgggggcaccggggagccccgcgctcctggcgctgctcctgctgggcgccgccgccgcg
gcgcgtcaggagctgcaagtcatcgacctgctgctggtgagcgaggctcggcagatggcc
agcgtggcccacaagatccgcatggagcttctgaccgtcaacgacgtgtacctcctctcc
accttccgcctgccccccaagcagggcgggaccctcttcggcctctactccaagaaggac
aacacccgatggctggaggtctctgtcgtggggaagatcaacaaagtcctggtgcggtac
ctgcgggaggacaacaaggtgcactcggtcaacctgcagcacgcgcatgtggcggacggg
cagagccactctgtcatcgtgcgcctgagcgggctgcgcagggacacgctgaacgtggag
ctctacgtcgactgcaagcagatggactccagcgtggggctgcctgagctgtcggagatc
cccctggccgaggtggagtccatcgaggtgcgcacagggatgaaggcctaccagaggatg
caggggtttgtagagtcgatgaagctgatcctgggagggtccatgagccgtgtgggggcc
ctgagcgagtgccctttccaaggggacgagtccattcacagtgcagtgacgagtgcgctg
gcctccatcctaggtgagcagaccaaggcactggtcacgcagttgaccctcttcaaccgg
gtcctgaccgagctgcgggaagacattagggaccaggtgaaggagatgtctctgatccgc
aacaccatcatggagtgccaggtctgcggcttccacgagcaccggtcccgctgcaacccc
aatccctgcttcagcggggtggactgcatggagacctacgagtaccctgggtaccgctgc
gggccctgcccgccggggctggagggcaacggcacgcactgcgttgacatcgaggagtgt
gcccatgccaacccctgcttccctggctccaagtgcatcaacacggcccccgggttccgc
tgcgagccctgtccccgtggctatcgaggcaacacggtctctggtgtaggggtggactat
gccaaggccagcaagcaggtttgcacagatattgatgaatgcaacgatgggaacaacggg
ggctgcgaccccaactccatctgcaccaacacgctgggctcctacaagtgcggaccctgc
aagtcgggctttgtggggaaccaaacgtccggctgcgtcccacagaggtcctgcagcact
cccacctccaacccctgcgacatcaacggcttctgcctgtttgagaggaatggggagatc
tcctgcgcatgtaatgtgggctgggctggcaacggcaacgtgtgtgggccagacacggac
ctggatgggtacccggacgagcccctgccctgcatcgacaacaacaagcactgcaagcag
gacaactgccgcctgacgcccaattctgggcaggaggacgctgacaacgacggcattggg
gaccaatgcgatgacgacgctgacggcgatggcgtcaagaatgtggaggacaactgccgg
ctcttccccaacaaggaccaacagaactcggacaccgactcctttggggatgcctgtgac
aactgccccaacgtgcccaacaatgaccagcgggacacagacagcaatggcgagggggat
gcttgtgacaatgacattgatggggacgggatacccaacatgctggataactgccccaag
gtgcccaaccctctgcagactgatcgggatgaggacggtgttggggatgcctgtgacagt
tgccctgaaatgagcaaccccactcagacagatatggacagtgacctggtaggagacatc
tgtgacaccaacgaggacagtgatggggatgggcatcaggacaccaaggacaactgcgct
gagatccccaacagctcccagctggactcggacaacgacgggctgggggatgactgtgac
aacgacgatgacaacgatggcatcccggactatgtggcacctggcccagacaactgccgc
ctcatccccaatcccaaccagaaagactcggacgggaacggcgtgggtgacgtctgcgag
gaggacttcgacaatgacacggtggtggaccagctggacgcgtgccctgagagcgccgag
gtgacgctgaccgacttccgcgcctaccagactgtcatcctggaccccgagggggacgcc
cagatcgaccccaactgggttgtgctcaaccagggcatggagatcgtgcagactatgaac
agcgacccgggtttggctgtgggttacacagccttcaacggggtggactttgagggcacc
ttccacgtcaacaccatcaccgacgacgactacgccggcttcatcttcagctaccaggac
agcgccagcttctacgtggtgatgtggaagcagacggagcagacgtactggcaggccacc
cccttccgtgctgtggccgagccggggctgcagctcaaggcagtgaagtcctcgacgggc
cctggggagcacctgcgcaacgcgctgtggcacacgggccacacgcccgaccacgtccgc
ctgctctggaaggacccccggaacgtgggctggagggacaagacgtcctaccgctggcag
ctggcacacaggccccaggtgggctacatcagggtccgtctgtacgagggcccgcagctg
gtggccgactccggtgtgatcatcgacaccacgatgcgcgggggccggctgggggtcttc
tgcttctcccaggagaacatcatctggtccaacctgcagtaccgctgcaacgacacgatc
cctgccgacttcgagcccttccgccggttcctgctggagggacgcgagtga
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