Hirundo rustica (Barn swallow): 120764287
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Entry
120764287 CDS
T09369
Symbol
UBQLN4
Name
(RefSeq) ubiquilin-4 isoform X1
KO
K04523
ubiquilin
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120764287 (UBQLN4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120764287 (UBQLN4)
03051 Proteasome [BR:
hrt03051
]
120764287 (UBQLN4)
Membrane trafficking [BR:
hrt04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
120764287 (UBQLN4)
Proteasome [BR:
hrt03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
120764287 (UBQLN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
STI1-HOP_DP
UBA
Rad60-SLD
YukD
Ubiquitin_5
UBA_7
UBA_HOIP
Rad60-SLD_2
UBA_NBR1_C
CUE
Arm_2
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
120764287
NCBI-ProteinID:
XP_039944115
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All DBs
Position
29:496604..508229
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AA seq
611 aa
AA seq
DB search
MAEPSGGGGGGGPGPGSGGDGQAGPGGALIRVTVKTPKDKEEIVIADGASVREFKEEISR
RFKAKQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTPQKVQDSASAASASSAASA
PTATPSSPAAPSQPSTSSSAGPDAGSGSRRSSGSGTVGGPGDGGPNSAASILSGFGGITG
LGNLGMGSANFMELQQQMQRQLMSNPEMLSQIMENPLVQNMMSNPDLMRQMIMANPQMQQ
LMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYT
DIQEPMFSAAREQFGNNPFSSLTGNSDSSSSQPLRTENREPLPNPWSPTPPASQSQAPSS
EGSTGSATTQGTPSVSNPFGLNAASFGAGMFNSPEMQGLLQQISENPQLMQNMISAPYMR
SMMQTLAQNPDFAAQIMVNVPLFAGNPQLQEQLRLQLPVFLQQMQNPDSLSILTNPRAMQ
ALLQIQQGLQTLQTEAPGLVPSLGSFGMPRMPPSSTGGSTIPENPVPSVSTPASASPAGG
GNPQQQLMQQMIQLLAGGSSQAQSPEVRFQQQLEQLNAMGFINREANLQALIATGGDINA
AIERLLGSQPS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccgagtggtggcggcggtggcggcggccccggccccgggtccggcggggac
ggccaggcagggcctggcggggcgctcatccgcgtcaccgtgaagacccccaaggacaag
gaggagatcgtcatcgcggacggtgcctccgtgcgcgagttcaaagaagagatttctaga
cggtttaaagccaaacaggatcagctggttctgatctttgctgggaagatcctgaaggat
ggagacacgttgaatcaacatgggatcaaagatgggctcactgttcacttggtcattaag
actccgcagaaggtccaagattcagcatctgctgcttctgcctccagtgctgcttctgcc
cccactgcaaccccttcttctcctgctgccccatctcagccctctacatccagcagtgct
gggccggatgcagggagtggcagcagacggagcagcgggtcggggaccgtgggaggtcct
ggagatggaggccccaacagtgcagcatccatcctgtctggcttcggtggcatcactggg
ctgggcaaccttgggatgggctctgccaacttcatggagctccagcagcagatgcagcga
cagctgatgtccaacccagagatgctttcccagatcatggagaatcccttggtgcagaac
atgatgtctaaccctgacctcatgaggcagatgatcatggccaatccgcagatgcagcag
ctcatggagcgaaatccagagataagccacatgctcaataacccagagctcatgaggcag
acgatggaattggctcgtaaccctgccatgatgcaggagatgatgcggaaccaggaccgt
gctttgagtaacctcgagagcattccaggaggatacaatgccctgcgccggatgtacacg
gacatccaggagcccatgttcagtgcggccagggaacagtttggcaacaatcctttctct
tccttgacggggaattctgacagctcgagctctcagcctttgcggacggagaacagagag
ccgttgccaaacccctggagccccacaccccctgcttcccagagtcaggcacccagcagt
gaagggagcacgggctcggcaaccacccagggcaccccgagtgtatccaacccctttggg
ctgaatgctgccagttttggcgctggcatgttcaacagcccggagatgcaaggactcctg
cagcagatttctgaaaaccctcagttgatgcagaatatgatctctgccccgtacatgcgg
agcatgatgcaaactcttgcccagaacccggactttgcagcacagatcatggtaaatgtc
cccctctttgctgggaatccacagcttcaagaacagctccgccttcagctccctgtcttc
ttgcagcagatgcagaatccggactccctgtccatcctcaccaacccccgcgccatgcag
gccctgctccagatccagcagggactccagacgctgcagacggaggcccctggactagtg
ccaagcctcggctcctttggcatgccccggatgcccccgtcctccacaggaggaagcaca
atcccggagaaccccgttccctccgtttcgacgccggccagtgcctctccagctgggggt
ggtaaccctcaacagcagctcatgcagcagatgatccagctgctggccggaggaagctct
caagctcagagtcccgaagtgcgattccaacagcagctggagcagctgaatgccatgggc
ttcatcaaccgtgaggccaatctccaggcgctcatcgccactggtggggacatcaacgca
gctatcgagagactgctgggctcccagccttcctaa
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