Hirundo rustica (Barn swallow): 120764288
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Entry
120764288 CDS
T09369
Symbol
VPS45
Name
(RefSeq) vacuolar protein sorting-associated protein 45
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120764288 (VPS45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120764288 (VPS45)
Membrane trafficking [BR:
hrt04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120764288 (VPS45)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
B12-binding
Motif
Other DBs
NCBI-GeneID:
120764288
NCBI-ProteinID:
XP_039944118
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All DBs
Position
29:1347908..1361229
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AA seq
570 aa
AA seq
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MNAVLAVRQYVSKMIEDSGPGMKVLLMDRETTGAVSVVYTQSEILQREVYLFERLDSPNR
EPMKHLKAICFLRPTKENVELLVQELRRPKYSVYFIYFSNVISKSDVKALAEADEQEVVA
EVQEFYGDYIAVNPHVFSLNLLGCCRGRSWDPAQLTRTTQGLTALLLSLKKCPMIRYQLS
SEPAKRLAECVKQVITKEYELFDFRRTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELL
GINNNRIDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGTNIKNLMEDFQRRKPK
EQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVAERNLLEVSEVEQELACQ
SDHSSALQSVRRLLQSPRVSELDAARLVMLYALRYERHGSSGLPALLEELRGRGGTDRYR
KLVSAVVEYGGKRARGSDLFSPKDAVAITKQFLKGLKGIENVYTQHQPLLQETLDQLIKG
KLKDSQYPYLGPNTLRDRPQDIIVFLIGGATYEEALAVFNLNRSNPGVRIVLGGTTIHNT
RSFLEEVTAAGFRGRSADSSQAPPRSSSRR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcggtgctcgcggtccggcagtacgtgtccaagatgatcgaggacagcggcccc
ggcatgaaggtgctgctgatggaccgggagacgaccggtgccgtgagcgtggtgtacacc
cagtccgagatcctgcagagagaggtttatctcttcgagcgcctcgactcgcccaacagg
gagcccatgaagcacctcaaggccatctgcttcctgcggcccaccaaggagaacgtggag
ctcctggtgcaggagctgcgaaggcccaagtacagcgtctacttcatctatttcagcaac
gtcatcagcaagagcgatgtgaaggccttggccgaggccgatgagcaagaggtcgtggct
gaagtccaggagttctacggcgactacattgcagtgaacccacacgtcttctccctcaac
ctcctgggctgctgtcggggccgcagctgggacccggctcagctcaccaggacaacgcag
gggctcactgctctgctcctgtccctgaagaagtgccccatgatccggtaccagctctcc
tcggagccggccaagcgcttggccgagtgcgtgaagcaagtgatcacgaaggagtacgag
ctgtttgatttccggcgcaccgaggtccctcccctgctcctcatcctggaccggtcagac
gatgccatcacccccctcctgaaccagtggacgtaccaggccatggtccacgagctgctg
gggatcaacaacaaccgcatcgacctgtcccgcgtgccggggatcagcaaggacctgcgc
gaggtcgtcctgtcggccgagaacgatgagttctatgccaacaacatgtacctgaacttt
gccgagattggcaccaacatcaagaacttgatggaggatttccagaggaggaagccaaag
gagcagcagaagctggagtccatcgcagacatgaaggcctttgtggagaactaccctcag
ttcaagaagatgtcgggcacggtgtccaagcacgtgacagtggtgggggaactgtcccgg
ctggtggcagagaggaacctgctggaggtgtcagaggtggagcaggagctggcctgccag
agtgaccattccagtgctctccagagcgtgcggcggctgctgcagagcccgcgggtgtcg
gagctggacgcggcacggttggtgatgctctacgcgctgcgctacgaacgccacggcagc
agcggcctcccggcgctgctggaggagctgcgcggccgcggcggcaccgacaggtaccgc
aagctggtgtccgccgtggtggagtatggagggaagcgggcccgaggcagtgacctgttc
agccccaaggatgctgtggccatcaccaagcagttcctcaaaggcctgaagggcatcgag
aacgtgtacacccagcaccagcccctgctccaggaaaccctggaccagctcatcaaggga
aagctcaaggacagccagtatccctacctgggccccaacacactccgggacaggcctcag
gacatcatcgtgttcctcatcggaggggccacctacgaggaggctctggctgtgttcaac
ctgaaccgctccaaccccggtgtccgcatcgtcctgggtggcaccaccatccacaacacc
aggagcttcctggaggaggtcacagccgcaggattccgcggtcgaagcgccgacagctcc
caagccccaccaaggtccagcagccgacggtga
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