KEGG   Hirundo rustica (Barn swallow): 120764292
Entry
120764292         CDS       T09369                                 
Symbol
MEX3A
Name
(RefSeq) RNA-binding protein MEX3A
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
hrt  Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:hrt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hrt03019]
    120764292 (MEX3A)
   04121 Ubiquitin system [BR:hrt04121]
    120764292 (MEX3A)
Enzymes [BR:hrt01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     120764292 (MEX3A)
Messenger RNA biogenesis [BR:hrt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     120764292 (MEX3A)
Ubiquitin system [BR:hrt04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    120764292 (MEX3A)
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP zf-RING_2 KH_KhpA-B zf-C3HC4_2 KH_2 RING_XB3-XBAT31 zf-C3HC4 Prok-RING_4
Other DBs
NCBI-GeneID: 120764292
NCBI-ProteinID: XP_039944127
LinkDB
Position
29:458788..470947
AA seq 524 aa
MPSLVVPGIMERNGGFGDLGCFGGSGKDRALLEDDRALQLALDQLCLLGLGEPSSSSSSS
AVVLVEDSNNNNNNPPPPPPQQPPPPPPPPQQPPPPPPPPPPAAPKGSAAPSAGAAEPKL
CALYKEAELRLKSSSNTTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEP
VFMVTGRREDVAMARREIISAAEHFSMIRASRNKAGTTFGSAPTLPGQVTIRVRVPYRVV
GLVVGPKGATIKRIQQQTNTYIITPSRDRDPVFEITGAPGNVERAREEIETHIAVRTGKI
LEYNNENDFLSSSPDSGMENRYSEAWRVHTPAPGCKPLSTFRQNSLGCIGDCSVDPVYET
PRLNDQNDFNYGYLFPNYGVNKQDLYYGVPESGAPMWAGQENTNPVSVLFSKQQRSSSTG
AIHPNSHRSPSSSIPEPSLSGLPRRSQGEPLQGFSKLGTPAAARTSVGGSRECMVCFESE
VTAALVPCGHNLFCMECAVRICERTDPECPVCHAAATQAIRIFS
NT seq 1575 nt   +upstreamnt  +downstreamnt
atgcctagcctggtagtcccagggataatggaaaggaacgggggtttcggcgatttaggc
tgtttcggtgggagcggcaaagacagagcgctgcttgaggatgaccgggcgctacagctc
gccctggaccagctctgcctgctggggctaggcgagccttcctcctcctcctcctcctcg
gccgtggtgctggtggaggacagcaacaacaacaacaataacccgccgccgccgccgccg
cagcagcccccgccgccgccgccgccgccgcagcagccgccgccgccgccgccgccgccg
cccccggcggccccgaagggctcggcggcgcccagcgccggggcggcggagcccaagttg
tgcgcgctctacaaggaggccgagctgcggctcaagagcagctccaacaccaccgagtgc
gtcccggtgcccagctccgagcacgtggccgagatcgtgggacggcaaggctgcaagatc
aaagccctgcgggccaagaccaacacctacatcaagaccccggtgcggggggaggagccg
gtcttcatggtgacggggcggcgggaggacgtggccatggcccggcgggagatcatctcg
gcagccgagcacttctccatgatcagggcctcccgcaacaaggcgggcaccaccttcggc
agcgcgcccacgctgccggggcaggtcaccatccgggtgcgcgtgccctaccgcgtggtg
gggctggtggtggggcccaagggagccaccatcaagaggatccaacagcagaccaacacc
tacatcatcacgccaagccgagaccgggaccccgtcttcgagatcaccggtgcgccgggc
aacgtggagcgtgcccgggaggagatcgagacgcacattgcggtgaggacaggcaagatt
ctggagtataacaacgagaacgacttcctctccagcagccctgactctggcatggagaac
cgctactcggaggcttggcgggtccacacaccggcgccgggctgcaagcctctgtccacc
ttccggcagaacagcctgggctgcatcggcgactgctccgttgaccccgtctatgagacc
ccccggctgaacgaccaaaacgacttcaattacggttacctcttccccaactacggtgtg
aacaagcaggatctgtactacggggtgccggagtcgggagccccgatgtgggcagggcag
gagaacaccaaccccgtctcggtgctcttctcgaagcagcagcgctccagcagcacgggc
gccatccatcccaactcccaccgctcgccgtcctcctccatcccggagcccagcctctcc
gggctgccccggcggtcgcagggggagccgctccagggcttttccaagctgggaacgcca
gctgctgcccggacgtccgtgggcggcagccgcgagtgcatggtgtgcttcgagagcgag
gtgacggccgcgctggtgccgtgcggccacaacctcttctgcatggagtgtgccgtgagg
atctgcgagaggactgatcccgagtgccccgtttgccacgcggcagccactcaggccatt
agaatattttcctaa

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