Hirundo rustica (Barn swallow): 120764332
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Entry
120764332 CDS
T09369
Name
(RefSeq) coatomer subunit alpha-like
KO
K05236
coatomer subunit alpha
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120764332
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hrt04147
]
120764332
Membrane trafficking [BR:
hrt04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
120764332
Exosome [BR:
hrt04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120764332
Exosomal proteins of bladder cancer cells
120764332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
120764332
NCBI-ProteinID:
XP_039944211
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All DBs
Position
29:complement(2046107..2059667)
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AA seq
793 aa
AA seq
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MHSILIKNLKNEITKKIPVPNCDEIFYAGTGNLLLRDSDSITLFDVQQKRTLASVKISKV
KYVIWSGDMSHVALLAKHAILICNRKLELLCQIHENIRVKSGAWDESGVFIYTTSNHIKY
AVTSGDHGIIRTLDLPIYVTRVKGNSVYCLDRECRPRVLGIDPTEFRFKLALIHRKYDEV
LHMVRNAKLVGQSIIAYLQRKGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDK
GCWEKLGEAALLQGNHQVVEMCYQRTKNFDRLSFLYLITGNLEKLRKMMKIAEIRKDMSG
HYQNALYLGDVAERVRILRNCGQKSLAFLTAATHGLDEEAESLRESFDPEKETIPAVDPE
ARLLQPPAPVLPLDTNWPLLTVSKGFFEGSIAGKGKGGALAADIDMDAVGTEGWGEDAEL
QLDEDGFVDAGEGFGEEGAGKGPEEGGGWEVEEDLDLPPDLDVPAGPAGAAEDGFFVPPT
KGTSPAQVWCNNSQLPVDHILAGSFETAMRLLHDQVGVTNFGPYKQLFLQTFSRGRTTFQ
ALPSLPALYGFPHRNWKEAGPRSALPAVGLRLTELIQRLQLCYQLTTAGKFEEAVEKFRL
ILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERKKLPKETLEQQKRICEMAAYF
THSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILAACEKN
PSDSHQLNYDQHNPFDICAASYRPIYRGKALERCPLSGACYGPEFRGQICRVTTVTEIGK
DVLGLRISPLQFR
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgcactcgatcctgatcaagaacctgaagaacgaaatcaccaagaaaattccggttccc
aactgcgacgagattttctacgccggcaccgggaatctcctgctccgggactccgactcc
atcacgctcttcgacgtccagcagaagaggaccttggcctcggtgaagatctccaaggtg
aagtacgtgatctggtcgggcgacatgtcgcacgtggcgctgctggccaagcacgccatc
ctgatctgtaaccggaagctggagttgctgtgccagatccatgagaacatccgggtgaag
agcggcgcctgggacgagagcggcgtcttcatctacaccaccagcaaccacatcaaatac
gccgtcacctcgggggatcacggcatcatccgcacgctggatctgcccatctacgtgacg
cgcgtgaaggggaacagcgtctactgcctggatcgggaatgccggccccgcgtgctcggc
atcgaccccaccgagttccgcttcaaactggccctcatccacaggaaatacgacgaggtg
ctgcacatggtgcggaacgccaagctggtggggcagtccatcatcgcctacctgcagagg
aaggggtaccccgaggtggctctgcacttcgtcaaggacgagaaaacgcgcttcagcctg
gcgctggagtgcggcaacatcgagatcgccctggaggcggccaaggccctggatgacaag
ggctgctgggagaagctgggcgaggcggcgctgctgcaggggaaccaccaggtggtggag
atgtgctaccagcgcaccaagaacttcgaccgcctctccttcctctacctcatcaccggg
aacctggagaagctccggaagatgatgaagattgccgagatccgcaaggacatgagcggg
cactaccagaatgcgctctacctgggggacgtggccgagagggttcggatcctgcgcaac
tgcggccagaagtccctggcgttcctgacggccgccacgcacgggctggacgaggaggcc
gagagcctgcgggaatccttcgatcccgagaaggagacgatcccggccgtggatcccgag
gcgcggctgctgcagccgccggcgccggtgctgcccctggacaccaactggccgctgctg
accgtgtccaaaggcttcttcgagggctccatcgccgggaaagggaaaggaggagccctg
gccgccgacatcgacatggacgccgtgggcaccgagggctggggcgaggacgccgagctg
cagctggacgaagacggattcgtggacgccggggaaggattcggggaggaaggagcgggc
aaagggcccgaggaaggaggaggatgggaggtggaagaggatttggatcttccccccgat
ctggatgttcccgccggccccgcgggagcggccgaggacggattcttcgtgccccccacc
aaaggcaccagcccagcccaggtgtggtgcaacaactcccagctccccgtggatcacatc
ctggccggatccttcgagacagccatgaggctgctccatgaccaggtgggggtgaccaac
ttcgggccctacaagcagctcttcctgcagaccttttcccgaggccgcacgacattccag
gcgcttcccagcctcccggccttgtacggattcccgcaccgcaactggaaggaggccggg
cccaggagcgcgctgccggccgtggggctgcggctgacggagctgatccagcggctgcag
ctctgctaccagctgaccaccgccggaaagttcgaggaggccgtggagaaattccggctg
atcctgctcagcgtgcccctgctggtggtggacaacaagcaggagatcgccgaggcgcag
cagctgatcaccatttgtcgggaatacatcgtgggattgtccatggagatcgagaggaag
aagctgcccaaggagacactggagcagcagaagaggatctgtgagatggccgcctacttc
acgcactccaacctgcagcccgtgcacatgatcctggtgctccgcactgccctcaacctc
ttcttcaagctcaagaacttcaaaaccgccgccaccttcgcccggcgcctgctcgagctc
ggccccaagcccgaggtggcccagcagacgcggaagatcctggcggcgtgcgagaagaac
cccagcgacagccaccagctcaactacgaccagcacaaccccttcgacatctgcgccgcc
tcctaccgccccatctaccgcggcaaggcgctggagcgctgccccctcagcggcgcctgc
tacgggcccgagttccgcgggcagatctgccgcgtcaccacggtgacggagattgggaag
gacgtgctggggctgcgcatcagccccctccagttccgctag
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