Hirundo rustica (Barn swallow): 120764367
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Entry
120764367 CDS
T09369
Symbol
SNX27
Name
(RefSeq) sorting nexin-27 isoform X1
KO
K17936
sorting nexin-27
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120764367 (SNX27)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
120764367 (SNX27)
Membrane trafficking [BR:
hrt04131
]
Protein recycling
Others
Others
120764367 (SNX27)
Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
120764367 (SNX27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
RA
PDZ
PDZ_6
SNX17-27-31_F1_FERM
RA_2
USP7_C2
SNX17_FERM_C
PDZ_2
SNX17-31_F2_FERM
RA_3
Motif
Other DBs
NCBI-GeneID:
120764367
NCBI-ProteinID:
XP_039944257
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Position
29:1209612..1235646
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AA seq
524 aa
AA seq
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MADEEGEARPGARNGAGEGPPGGPRVVRIVKSESGYGFNVRGQVSEGGQLRSINGELYAP
LQHVSAVLGGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIRAGEKELVLTVLSVPP
HEAESLEPPEEPLGPPFYDYSEKQAVPISIPTYKHVEQSGEKFVVYNVYMAGRQLCSKRY
REFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEYLEKVCSIRVIGESDI
MQEFLSESDENYNGVSDVELRVALPDVTTVTVRVKKNSTTDQVYQAVAAKVGMDSVTANY
FALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTLRKWLFTTEEEALLNDNDLAV
AYFFHQAVDDVKKGYIKAEEKSYQLQKLCEQRKMVMYLTMLRTCEGYNEITFPHCSCDSR
RRGHVISAISIRHFKLHACTEEGQLENQVIAFQWEEMQRWDTDEEGMAFCFEYARAERKP
RWVKIFTPYFNYMHECFERVFCELKWRKENLFQLVRSQQRDAAT
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggagggcgaagcgcggccgggggcgcggaacggggccggggagggaccc
ccgggcgggccccgcgtcgtccgcatcgtcaagtccgagtccggttacggctttaacgtc
cgcgggcaagtgagcgaaggcgggcagctgcgcagcatcaacggcgagctgtacgcgccg
ctgcagcacgtcagcgccgtgctgggcggaggagccgccgaccgcgccggggtgcgcaag
ggggaccgcatcctggaggtgaacggtgtgaatgtggaaggagccacgcacaagcaggtg
gtggatctgatccgcgccggcgagaaggagctggtgctgacggtgctgtcggtgccgccg
cacgaggccgagagcctggagccgcccgaggagccgctggggccgcccttctacgactac
agcgagaagcaggcggtgcccatctccatccccacctacaaacacgtggagcagagcggg
gagaagttcgtggtgtacaacgtttacatggccgggcgccagctgtgctccaagcgctac
cgggaattcgccatcctgcaccagaacctgaagcgggaattcgccaacttcaccttcccg
cgcctgcccggcaagtggccgttctcgctgtcggagcagcagctggacgcccgcaggagg
ggcctggaggagtacctggagaaggtgtgctccatccgggtcatcggcgagagcgacatc
atgcaggaattcctgtcggagtcggacgagaattacaacggcgtctccgacgtggagctg
cgggtggcgctcccggacgtcaccacggtgacggtcagggtgaagaagaacagcaccacg
gaccaggtgtaccaggcggtggcagccaaggtgggcatggacagcgtcaccgccaactac
ttcgccctcttcgaggtcatcaaccactccttcgtgcggaagttggctcccaacgagttc
ccccacaagctctacgtgcagaattacacctcggccgtgccgggcacgtgcctgacgctg
cgcaagtggctcttcaccaccgaggaggaggcgctgctcaacgacaacgacctggccgtc
gcctacttcttccaccaggccgttgatgacgtcaagaaaggctacatcaaagccgaggag
aaatcctaccagctccagaagctctgcgagcagaggaagatggtcatgtacctgacgatg
ctgcgcacgtgcgagggctacaacgagatcacctttccgcactgctcgtgcgactcgcgg
cgccgcggccacgtcatcagcgccatcagcatccggcacttcaagctgcacgcctgcacc
gaggaggggcagctggagaaccaggtgatcgcgttccagtgggaggagatgcagcgctgg
gacacggacgaggaggggatggcgttctgcttcgagtacgcgcgcgccgagaggaaaccg
cgctgggtcaagatcttcaccccctacttcaattacatgcacgagtgcttcgagcgagtg
ttctgcgagctcaagtggaggaaggagaaccttttccagctggtcaggtcacagcaaagg
gacgcggccacttaa
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